RNA–Protein interactions for RNA: ENST00000531138.1

RAB38-203, Transcript of RAB38, member RAS oncogene family, humanhuman

TSL 2

Gene RAB38, Length 928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-203ENST00000531138 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
RAB38-203ENST00000531138 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
RAB38-203ENST00000531138 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
RAB38-203ENST00000531138 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
RAB38-203ENST00000531138 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
RAB38-203ENST00000531138 CPS1P31327 1500 aa23.7■■□□□ 1.38
RAB38-203ENST00000531138 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
RAB38-203ENST00000531138 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
RAB38-203ENST00000531138 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
RAB38-203ENST00000531138 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.66■■□□□ 1.38
RAB38-203ENST00000531138 HDGFP51858 240 aaKnown RBP23.65■■□□□ 1.38
RAB38-203ENST00000531138 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.37
RAB38-203ENST00000531138 BCANQ96GW7 911 aa23.63■■□□□ 1.37
RAB38-203ENST00000531138 ADAMTS13Q76LX8 1427 aa23.61■■□□□ 1.37
RAB38-203ENST00000531138 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
RAB38-203ENST00000531138 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
RAB38-203ENST00000531138 KCNA6P17658 529 aa23.59■■□□□ 1.37
RAB38-203ENST00000531138 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
RAB38-203ENST00000531138 UBAP1LF5GYI3 381 aa23.58■■□□□ 1.37
RAB38-203ENST00000531138 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
RAB38-203ENST00000531138 HRCP23327 699 aa23.56■■□□□ 1.36
RAB38-203ENST00000531138 KIF1BO60333 1816 aa23.56■■□□□ 1.36
RAB38-203ENST00000531138 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
RAB38-203ENST00000531138 CCDC144AA2RUR9 1427 aa23.53■■□□□ 1.36
RAB38-203ENST00000531138 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
RAB38-203ENST00000531138 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
RAB38-203ENST00000531138 SPATA31E1Q6ZUB1 1445 aa23.51■■□□□ 1.35
RAB38-203ENST00000531138 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
RAB38-203ENST00000531138 SETBP1Q9Y6X0 1596 aa23.51■■□□□ 1.35
RAB38-203ENST00000531138 XIRP1Q702N8 1843 aaKnown RBP23.5■■□□□ 1.35
RAB38-203ENST00000531138 DIP2AQ14689 1571 aa23.5■■□□□ 1.35
RAB38-203ENST00000531138 TMEM94Q12767 1356 aa23.5■■□□□ 1.35
RAB38-203ENST00000531138 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
RAB38-203ENST00000531138 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
RAB38-203ENST00000531138 PROSER2Q86WR7 435 aaPredicted RBP23.48■■□□□ 1.35
RAB38-203ENST00000531138 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
RAB38-203ENST00000531138 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
RAB38-203ENST00000531138 TOM1O60784 492 aa23.46■■□□□ 1.35
RAB38-203ENST00000531138 METP08581 1390 aa23.46■■□□□ 1.35
RAB38-203ENST00000531138 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
RAB38-203ENST00000531138 PIK3R4Q99570 1358 aa23.46■■□□□ 1.35
RAB38-203ENST00000531138 ANKRD30BQ9BXX2 1392 aa23.46■■□□□ 1.35
RAB38-203ENST00000531138 PIP4K2BP78356 416 aa23.45■■□□□ 1.34
RAB38-203ENST00000531138 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
RAB38-203ENST00000531138 PPLO60437 1756 aa23.43■■□□□ 1.34
RAB38-203ENST00000531138 AMOTL2Q9Y2J4 779 aa23.42■■□□□ 1.34
RAB38-203ENST00000531138 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
RAB38-203ENST00000531138 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
RAB38-203ENST00000531138 XRN1Q8IZH2 1706 aaKnown RBP23.37■■□□□ 1.33
RAB38-203ENST00000531138 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
RAB38-203ENST00000531138 IFT172Q9UG01 1749 aa23.36■■□□□ 1.33
RAB38-203ENST00000531138 HSPA1LP34931 641 aa23.34■■□□□ 1.33
RAB38-203ENST00000531138 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
RAB38-203ENST00000531138 MSH6P52701 1360 aa23.31■■□□□ 1.32
RAB38-203ENST00000531138 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
RAB38-203ENST00000531138 NRXN1Q9ULB1 1477 aa23.28■■□□□ 1.32
RAB38-203ENST00000531138 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
RAB38-203ENST00000531138 MYOM2P54296 1465 aa23.26■■□□□ 1.31
RAB38-203ENST00000531138 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
RAB38-203ENST00000531138 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
RAB38-203ENST00000531138 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
RAB38-203ENST00000531138 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
RAB38-203ENST00000531138 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
RAB38-203ENST00000531138 DHX57Q6P158 1386 aaKnown RBP23.25■■□□□ 1.31
RAB38-203ENST00000531138 PRAG1Q86YV5 1406 aa23.25■■□□□ 1.31
RAB38-203ENST00000531138 SLAIN2Q9P270 581 aa23.24■■□□□ 1.31
RAB38-203ENST00000531138 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
RAB38-203ENST00000531138 PTCH1Q13635 1447 aa23.24■■□□□ 1.31
RAB38-203ENST00000531138 TMEM132EQ6IEE7 984 aa23.23■■□□□ 1.31
RAB38-203ENST00000531138 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
RAB38-203ENST00000531138 CFAP70Q5T0N1 1121 aa23.21■■□□□ 1.31
RAB38-203ENST00000531138 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
RAB38-203ENST00000531138 ROBO1Q9Y6N7 1651 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 ADGRL3Q9HAR2 1447 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 LRPPRCP42704 1394 aaKnown RBP23.19■■□□□ 1.3
RAB38-203ENST00000531138 ATF3P18847 181 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 STK26Q9P289 416 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
RAB38-203ENST00000531138 DCCP43146 1447 aa23.17■■□□□ 1.3
RAB38-203ENST00000531138 TECPR2O15040 1411 aa23.16■■□□□ 1.3
RAB38-203ENST00000531138 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
RAB38-203ENST00000531138 ABCC11Q96J66 1382 aa23.15■■□□□ 1.3
RAB38-203ENST00000531138 YTHDC2Q9H6S0 1430 aaKnown RBP23.15■■□□□ 1.3
RAB38-203ENST00000531138 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
RAB38-203ENST00000531138 MST1RQ04912 1400 aa23.14■■□□□ 1.29
RAB38-203ENST00000531138 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
RAB38-203ENST00000531138 SIN3AQ96ST3 1273 aa23.12■■□□□ 1.29
RAB38-203ENST00000531138 LAMC1P11047 1609 aa23.11■■□□□ 1.29
RAB38-203ENST00000531138 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
RAB38-203ENST00000531138 BRINP3Q76B58 766 aa23.1■■□□□ 1.29
RAB38-203ENST00000531138 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
RAB38-203ENST00000531138 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
RAB38-203ENST00000531138 SIRT1Q96EB6 747 aa23.06■■□□□ 1.28
RAB38-203ENST00000531138 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
RAB38-203ENST00000531138 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
RAB38-203ENST00000531138 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
RAB38-203ENST00000531138 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
RAB38-203ENST00000531138 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
RAB38-203ENST00000531138 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms