RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
UBXN1-211ENST00000531056 SETD5Q9C0A6 1442 aa28.44■■■□□ 2.14
UBXN1-211ENST00000531056 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
UBXN1-211ENST00000531056 KIF1BO60333 1816 aa28.43■■■□□ 2.14
UBXN1-211ENST00000531056 HDGFP51858 240 aaKnown RBP28.41■■■□□ 2.14
UBXN1-211ENST00000531056 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.41■■■□□ 2.14
UBXN1-211ENST00000531056 NWD1Q149M9 1564 aa28.41■■■□□ 2.14
UBXN1-211ENST00000531056 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
UBXN1-211ENST00000531056 SLC26A8Q96RN1 970 aa28.39■■■□□ 2.14
UBXN1-211ENST00000531056 XIRP1Q702N8 1843 aaKnown RBP28.39■■■□□ 2.13
UBXN1-211ENST00000531056 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
UBXN1-211ENST00000531056 NEXMIFQ5QGS0 1516 aa28.36■■■□□ 2.13
UBXN1-211ENST00000531056 ADAMTS13Q76LX8 1427 aa28.35■■■□□ 2.13
UBXN1-211ENST00000531056 UBAP1LF5GYI3 381 aa28.35■■■□□ 2.13
UBXN1-211ENST00000531056 NUTM2DQ5VT03 806 aaPredicted RBP28.35■■■□□ 2.13
UBXN1-211ENST00000531056 ALKQ9UM73 1620 aa28.35■■■□□ 2.13
UBXN1-211ENST00000531056 RAB3GAP2Q9H2M9 1393 aa28.35■■■□□ 2.13
UBXN1-211ENST00000531056 CHD2O14647 1828 aaKnown RBP28.34■■■□□ 2.13
UBXN1-211ENST00000531056 ACIN1Q9UKV3 1341 aaKnown RBP28.34■■■□□ 2.13
UBXN1-211ENST00000531056 NRXN3Q9Y4C0 1643 aa28.33■■■□□ 2.13
UBXN1-211ENST00000531056 MPHOSPH9Q99550 1183 aa28.33■■■□□ 2.13
UBXN1-211ENST00000531056 KCNA6P17658 529 aa28.32■■■□□ 2.12
UBXN1-211ENST00000531056 FOXD1Q16676 465 aa28.32■■■□□ 2.12
UBXN1-211ENST00000531056 BCANQ96GW7 911 aa28.32■■■□□ 2.12
UBXN1-211ENST00000531056 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
UBXN1-211ENST00000531056 NKTRP30414 1462 aaKnown RBP28.32■■■□□ 2.12
UBXN1-211ENST00000531056 SETBP1Q9Y6X0 1596 aa28.31■■■□□ 2.12
UBXN1-211ENST00000531056 TBX22Q9Y458 520 aa28.29■■■□□ 2.12
UBXN1-211ENST00000531056 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
UBXN1-211ENST00000531056 PPLO60437 1756 aa28.24■■■□□ 2.11
UBXN1-211ENST00000531056 TOM1O60784 492 aa28.24■■■□□ 2.11
UBXN1-211ENST00000531056 CCDC144AA2RUR9 1427 aa28.24■■■□□ 2.11
UBXN1-211ENST00000531056 TMEM94Q12767 1356 aa28.23■■■□□ 2.11
UBXN1-211ENST00000531056 PIK3R4Q99570 1358 aa28.23■■■□□ 2.11
UBXN1-211ENST00000531056 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
UBXN1-211ENST00000531056 PROSER2Q86WR7 435 aaPredicted RBP28.18■■■□□ 2.1
UBXN1-211ENST00000531056 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
UBXN1-211ENST00000531056 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
UBXN1-211ENST00000531056 PTPRUQ92729 1446 aa28.18■■■□□ 2.1
UBXN1-211ENST00000531056 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
UBXN1-211ENST00000531056 SETD1AO15047 1707 aaKnown RBP28.17■■■□□ 2.1
UBXN1-211ENST00000531056 HRCP23327 699 aa28.16■■■□□ 2.1
UBXN1-211ENST00000531056 PIP4K2BP78356 416 aa28.16■■■□□ 2.1
UBXN1-211ENST00000531056 RBM33Q96EV2 1170 aaKnown RBP28.13■■■□□ 2.09
UBXN1-211ENST00000531056 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
UBXN1-211ENST00000531056 METP08581 1390 aa28.11■■■□□ 2.09
UBXN1-211ENST00000531056 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
UBXN1-211ENST00000531056 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
UBXN1-211ENST00000531056 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
UBXN1-211ENST00000531056 MSH6P52701 1360 aa28.06■■■□□ 2.08
UBXN1-211ENST00000531056 HSPA1LP34931 641 aa28.05■■■□□ 2.08
UBXN1-211ENST00000531056 ANKRD30BQ9BXX2 1392 aa28.05■■■□□ 2.08
UBXN1-211ENST00000531056 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
UBXN1-211ENST00000531056 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.03■■■□□ 2.08
UBXN1-211ENST00000531056 ROBO1Q9Y6N7 1651 aa28■■■□□ 2.07
UBXN1-211ENST00000531056 ADGRF5Q8IZF2 1346 aa28■■■□□ 2.07
UBXN1-211ENST00000531056 FAM135BQ49AJ0 1406 aa28■■■□□ 2.07
UBXN1-211ENST00000531056 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
UBXN1-211ENST00000531056 PIK3C2GO75747 1445 aa27.97■■■□□ 2.07
UBXN1-211ENST00000531056 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
UBXN1-211ENST00000531056 MYOM2P54296 1465 aa27.95■■■□□ 2.07
UBXN1-211ENST00000531056 NRXN1Q9ULB1 1477 aa27.95■■■□□ 2.07
UBXN1-211ENST00000531056 NALCNQ8IZF0 1738 aa27.94■■■□□ 2.06
UBXN1-211ENST00000531056 ASXL1Q8IXJ9 1541 aa27.93■■■□□ 2.06
UBXN1-211ENST00000531056 C19orf44Q9H6X5 657 aa27.93■■■□□ 2.06
UBXN1-211ENST00000531056 DCCP43146 1447 aa27.92■■■□□ 2.06
UBXN1-211ENST00000531056 C14orf37Q86TY3 774 aa27.92■■■□□ 2.06
UBXN1-211ENST00000531056 SLAIN2Q9P270 581 aa27.9■■■□□ 2.06
UBXN1-211ENST00000531056 ADGRL3Q9HAR2 1447 aa27.9■■■□□ 2.06
UBXN1-211ENST00000531056 ROBO2Q9HCK4 1378 aa27.89■■■□□ 2.06
UBXN1-211ENST00000531056 LAMC1P11047 1609 aa27.89■■■□□ 2.05
UBXN1-211ENST00000531056 KNDC1Q76NI1 1749 aa27.88■■■□□ 2.05
UBXN1-211ENST00000531056 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
UBXN1-211ENST00000531056 ATF3P18847 181 aa27.85■■■□□ 2.05
UBXN1-211ENST00000531056 TECPR2O15040 1411 aa27.84■■■□□ 2.05
UBXN1-211ENST00000531056 MED1Q15648 1581 aaPredicted RBP27.83■■■□□ 2.05
UBXN1-211ENST00000531056 PHLPP1O60346 1717 aa27.82■■■□□ 2.04
UBXN1-211ENST00000531056 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
UBXN1-211ENST00000531056 MST1RQ04912 1400 aa27.82■■■□□ 2.04
UBXN1-211ENST00000531056 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
UBXN1-211ENST00000531056 C14orf93Q9H972 538 aaKnown RBP27.8■■■□□ 2.04
UBXN1-211ENST00000531056 AHDC1Q5TGY3 1603 aaPredicted RBP27.78■■■□□ 2.04
UBXN1-211ENST00000531056 YTHDC2Q9H6S0 1430 aaKnown RBP27.78■■■□□ 2.04
UBXN1-211ENST00000531056 DHX57Q6P158 1386 aaKnown RBP27.78■■■□□ 2.04
UBXN1-211ENST00000531056 ABCC11Q96J66 1382 aa27.78■■■□□ 2.04
UBXN1-211ENST00000531056 COL16A1Q07092 1604 aaPredicted RBP27.78■■■□□ 2.04
UBXN1-211ENST00000531056 TMEM132EQ6IEE7 984 aa27.77■■■□□ 2.04
UBXN1-211ENST00000531056 CFAP70Q5T0N1 1121 aa27.75■■■□□ 2.03
UBXN1-211ENST00000531056 ADGRB1O14514 1584 aa27.73■■■□□ 2.03
UBXN1-211ENST00000531056 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
UBXN1-211ENST00000531056 DCAF11Q8TEB1 546 aa27.73■■■□□ 2.03
UBXN1-211ENST00000531056 STK26Q9P289 416 aa27.73■■■□□ 2.03
UBXN1-211ENST00000531056 NHSL1Q5SYE7 1610 aa27.72■■■□□ 2.03
UBXN1-211ENST00000531056 BRINP3Q76B58 766 aa27.72■■■□□ 2.03
UBXN1-211ENST00000531056 STAC3Q96MF2 364 aa27.71■■■□□ 2.03
UBXN1-211ENST00000531056 PLEKHH1Q9ULM0 1364 aa27.7■■■□□ 2.02
UBXN1-211ENST00000531056 C1orf167Q5SNV9 1468 aa27.7■■■□□ 2.02
UBXN1-211ENST00000531056 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
UBXN1-211ENST00000531056 TRIM26Q12899 539 aaPredicted RBP27.68■■■□□ 2.02
UBXN1-211ENST00000531056 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms