RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
TRIM3-210ENST00000530724 ATP10BO94823 1461 aa15.16■□□□□ 0.02
TRIM3-210ENST00000530724 BECN1Q14457 450 aa15.16■□□□□ 0.02
TRIM3-210ENST00000530724 ISY1Q9ULR0 285 aaKnown RBP15.16■□□□□ 0.02
TRIM3-210ENST00000530724 IQGAP1P46940 1657 aa15.16■□□□□ 0.02
TRIM3-210ENST00000530724 PLIN1O60240 522 aa15.15■□□□□ 0.02
TRIM3-210ENST00000530724 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
TRIM3-210ENST00000530724 C20orf194Q5TEA3 1177 aa15.15■□□□□ 0.02
TRIM3-210ENST00000530724 ANTXR1Q9H6X2 564 aa15.15■□□□□ 0.02
TRIM3-210ENST00000530724 PANK3Q9H999 370 aa15.15■□□□□ 0.02
TRIM3-210ENST00000530724 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
TRIM3-210ENST00000530724 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
TRIM3-210ENST00000530724 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
TRIM3-210ENST00000530724 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
TRIM3-210ENST00000530724 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
TRIM3-210ENST00000530724 E9PSI1 815 aa15.13■□□□□ 0.01
TRIM3-210ENST00000530724 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
TRIM3-210ENST00000530724 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
TRIM3-210ENST00000530724 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
TRIM3-210ENST00000530724 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
TRIM3-210ENST00000530724 KANK1Q14678 1352 aa15.11■□□□□ 0.01
TRIM3-210ENST00000530724 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
TRIM3-210ENST00000530724 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
TRIM3-210ENST00000530724 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
TRIM3-210ENST00000530724 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIM3-210ENST00000530724 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
TRIM3-210ENST00000530724 CLCN1P35523 988 aa15.07■□□□□ 0
TRIM3-210ENST00000530724 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
TRIM3-210ENST00000530724 TBC1D32Q96NH3 1257 aa15.06■□□□□ 0
TRIM3-210ENST00000530724 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
TRIM3-210ENST00000530724 PTPRTO14522 1441 aa15.06■□□□□ 0
TRIM3-210ENST00000530724 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
TRIM3-210ENST00000530724 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
TRIM3-210ENST00000530724 POLR3AO14802 1390 aaPredicted RBP15.05■□□□□ -0
TRIM3-210ENST00000530724 SBNO2Q9Y2G9 1366 aa15.05■□□□□ -0
TRIM3-210ENST00000530724 MYO5CQ9NQX4 1742 aa15.05■□□□□ -0
TRIM3-210ENST00000530724 SLC4A3P48751 1232 aa15.04■□□□□ -0
TRIM3-210ENST00000530724 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
TRIM3-210ENST00000530724 PMFBP1Q8TBY8 1022 aa15.04■□□□□ -0
TRIM3-210ENST00000530724 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
TRIM3-210ENST00000530724 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
TRIM3-210ENST00000530724 MYOM1P52179 1685 aa15.03■□□□□ -0
TRIM3-210ENST00000530724 TRPM2O94759 1503 aa15.03■□□□□ -0
TRIM3-210ENST00000530724 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
TRIM3-210ENST00000530724 CDC42BPBQ9Y5S2 1711 aa15.02□□□□□ -0.01
TRIM3-210ENST00000530724 SPHKAPQ2M3C7 1700 aa15.01□□□□□ -0.01
TRIM3-210ENST00000530724 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
TRIM3-210ENST00000530724 GLIPR1L2Q4G1C9 344 aa15□□□□□ -0.01
TRIM3-210ENST00000530724 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
TRIM3-210ENST00000530724 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
TRIM3-210ENST00000530724 RRP9O43818 475 aaKnown RBP14.99□□□□□ -0.01
TRIM3-210ENST00000530724 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
TRIM3-210ENST00000530724 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
TRIM3-210ENST00000530724 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
TRIM3-210ENST00000530724 RRAGDQ9NQL2 400 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-210ENST00000530724 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
TRIM3-210ENST00000530724 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 MYOM2P54296 1465 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 IGHDP01880 384 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-210ENST00000530724 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-210ENST00000530724 POGKQ9P215 609 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 RTEL1-TNFRSF6BF6WH68 1400 aa14.98□□□□□ -0.01
TRIM3-210ENST00000530724 MYO3AQ8NEV4 1616 aa14.97□□□□□ -0.01
TRIM3-210ENST00000530724 PTMSP20962 102 aa14.97□□□□□ -0.01
TRIM3-210ENST00000530724 MRE11P49959 708 aa14.97□□□□□ -0.01
TRIM3-210ENST00000530724 CENPJQ9HC77 1338 aaPredicted RBP14.96□□□□□ -0.01
TRIM3-210ENST00000530724 MCM4P33991 863 aa14.96□□□□□ -0.01
TRIM3-210ENST00000530724 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
TRIM3-210ENST00000530724 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
TRIM3-210ENST00000530724 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
TRIM3-210ENST00000530724 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
TRIM3-210ENST00000530724 ARHGAP31Q2M1Z3 1444 aa14.95□□□□□ -0.02
TRIM3-210ENST00000530724 GOLGA6L3A6NEY3 463 aa14.95□□□□□ -0.02
TRIM3-210ENST00000530724 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM3-210ENST00000530724 KDM5AP29375 1690 aaKnown RBP14.95□□□□□ -0.02
TRIM3-210ENST00000530724 ARAP3Q8WWN8 1544 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIM3-210ENST00000530724 DDIT3P35638 169 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 RGS3P49796 1198 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
TRIM3-210ENST00000530724 VWDEQ8N2E2 1590 aa14.94□□□□□ -0.02
TRIM3-210ENST00000530724 DEPDC5O75140 1603 aa14.93□□□□□ -0.02
TRIM3-210ENST00000530724 CEP152O94986 1710 aa14.93□□□□□ -0.02
TRIM3-210ENST00000530724 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
TRIM3-210ENST00000530724 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
TRIM3-210ENST00000530724 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
TRIM3-210ENST00000530724 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
TRIM3-210ENST00000530724 BCAR3O75815 825 aa14.91□□□□□ -0.02
TRIM3-210ENST00000530724 SEC24BO95487 1268 aa14.91□□□□□ -0.02
TRIM3-210ENST00000530724 SNX21Q969T3 373 aa14.91□□□□□ -0.02
TRIM3-210ENST00000530724 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
TRIM3-210ENST00000530724 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
TRIM3-210ENST00000530724 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
TRIM3-210ENST00000530724 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
TRIM3-210ENST00000530724 APAF1O14727 1248 aa14.9□□□□□ -0.02
TRIM3-210ENST00000530724 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms