RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 PROSER2Q86WR7 435 aaPredicted RBP33.85■■■■□ 3.01
CDKN2A-210ENST00000530628 HDGFP51858 240 aaKnown RBP33.83■■■■□ 3.01
CDKN2A-210ENST00000530628 ROCK1Q13464 1354 aa33.83■■■■□ 3.01
CDKN2A-210ENST00000530628 TMEM131LA2VDJ0 1609 aa33.8■■■■□ 3
CDKN2A-210ENST00000530628 E9PCH4 1651 aa33.8■■■■□ 3
CDKN2A-210ENST00000530628 PPP1R15AO75807 674 aaPredicted RBP33.79■■■■□ 3
CDKN2A-210ENST00000530628 NWD1Q149M9 1564 aa33.79■■■■□ 3
CDKN2A-210ENST00000530628 ZFYVE9O95405 1425 aa33.79■■■■□ 3
CDKN2A-210ENST00000530628 FAM135BQ49AJ0 1406 aa33.78■■■■□ 3
CDKN2A-210ENST00000530628 RIMS2Q9UQ26 1411 aa33.78■■■■□ 3
CDKN2A-210ENST00000530628 NKTRP30414 1462 aaKnown RBP33.77■■■■□ 3
CDKN2A-210ENST00000530628 CHGAP10645 457 aaKnown RBP33.77■■■■□ 3
CDKN2A-210ENST00000530628 RBM33Q96EV2 1170 aaKnown RBP33.77■■■■□ 3
CDKN2A-210ENST00000530628 IQGAP3Q86VI3 1631 aa33.76■■■■□ 3
CDKN2A-210ENST00000530628 PLEKHG1Q9ULL1 1385 aa33.76■■■■□ 3
CDKN2A-210ENST00000530628 CHD2O14647 1828 aaKnown RBP33.75■■■□□ 2.99
CDKN2A-210ENST00000530628 ITGAEP38570 1179 aa33.74■■■□□ 2.99
CDKN2A-210ENST00000530628 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.71■■■□□ 2.99
CDKN2A-210ENST00000530628 ROBO1Q9Y6N7 1651 aa33.71■■■□□ 2.99
CDKN2A-210ENST00000530628 PPARGC1BQ86YN6 1023 aaKnown RBP33.69■■■□□ 2.98
CDKN2A-210ENST00000530628 NUP155O75694 1391 aa33.69■■■□□ 2.98
CDKN2A-210ENST00000530628 MSH6P52701 1360 aa33.69■■■□□ 2.98
CDKN2A-210ENST00000530628 TBX22Q9Y458 520 aa33.66■■■□□ 2.98
CDKN2A-210ENST00000530628 NUTM2DQ5VT03 806 aaPredicted RBP33.63■■■□□ 2.97
CDKN2A-210ENST00000530628 SLAIN2Q9P270 581 aa33.59■■■□□ 2.97
CDKN2A-210ENST00000530628 DIP2AQ14689 1571 aa33.58■■■□□ 2.97
CDKN2A-210ENST00000530628 ADAMTS13Q76LX8 1427 aa33.56■■■□□ 2.96
CDKN2A-210ENST00000530628 NCOA3Q9Y6Q9 1424 aa33.54■■■□□ 2.96
CDKN2A-210ENST00000530628 PHLPP1O60346 1717 aa33.54■■■□□ 2.96
CDKN2A-210ENST00000530628 SPHKAPQ2M3C7 1700 aa33.53■■■□□ 2.96
CDKN2A-210ENST00000530628 PIK3R4Q99570 1358 aa33.53■■■□□ 2.96
CDKN2A-210ENST00000530628 C14orf37Q86TY3 774 aa33.53■■■□□ 2.96
CDKN2A-210ENST00000530628 RGS17Q9UGC6 210 aaPredicted RBP33.53■■■□□ 2.96
CDKN2A-210ENST00000530628 TRPM2O94759 1503 aa33.49■■■□□ 2.95
CDKN2A-210ENST00000530628 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.46■■■□□ 2.95
CDKN2A-210ENST00000530628 C19orf44Q9H6X5 657 aa33.44■■■□□ 2.94
CDKN2A-210ENST00000530628 AMOTL2Q9Y2J4 779 aa33.44■■■□□ 2.94
CDKN2A-210ENST00000530628 ZNF326Q5BKZ1 582 aaKnown RBP33.43■■■□□ 2.94
CDKN2A-210ENST00000530628 CADPS2Q86UW7 1296 aa33.43■■■□□ 2.94
CDKN2A-210ENST00000530628 ATF3P18847 181 aa33.41■■■□□ 2.94
CDKN2A-210ENST00000530628 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
CDKN2A-210ENST00000530628 JCADQ9P266 1359 aa33.4■■■□□ 2.94
CDKN2A-210ENST00000530628 PTPRUQ92729 1446 aa33.38■■■□□ 2.93
CDKN2A-210ENST00000530628 COL16A1Q07092 1604 aaPredicted RBP33.37■■■□□ 2.93
CDKN2A-210ENST00000530628 NRXN3Q9Y4C0 1643 aa33.37■■■□□ 2.93
CDKN2A-210ENST00000530628 SETBP1Q9Y6X0 1596 aa33.36■■■□□ 2.93
CDKN2A-210ENST00000530628 KIF1BO60333 1816 aa33.35■■■□□ 2.93
CDKN2A-210ENST00000530628 POTEAQ6S8J7 498 aa33.35■■■□□ 2.93
CDKN2A-210ENST00000530628 CLTCL1P53675 1640 aa33.34■■■□□ 2.93
CDKN2A-210ENST00000530628 NAIPQ13075 1403 aa33.33■■■□□ 2.93
CDKN2A-210ENST00000530628 XRN1Q8IZH2 1706 aaKnown RBP33.32■■■□□ 2.92
CDKN2A-210ENST00000530628 AHDC1Q5TGY3 1603 aaPredicted RBP33.29■■■□□ 2.92
CDKN2A-210ENST00000530628 NEXMIFQ5QGS0 1516 aa33.27■■■□□ 2.92
CDKN2A-210ENST00000530628 METP08581 1390 aa33.26■■■□□ 2.92
CDKN2A-210ENST00000530628 DCCP43146 1447 aa33.26■■■□□ 2.91
CDKN2A-210ENST00000530628 SPATA31A6Q5VVP1 1343 aa33.26■■■□□ 2.91
CDKN2A-210ENST00000530628 TRIM52Q96A61 297 aa33.25■■■□□ 2.91
CDKN2A-210ENST00000530628 BRINP3Q76B58 766 aa33.22■■■□□ 2.91
CDKN2A-210ENST00000530628 SHPRHQ149N8 1683 aa33.22■■■□□ 2.91
CDKN2A-210ENST00000530628 MEX3CQ5U5Q3 659 aaKnown RBP33.19■■■□□ 2.9
CDKN2A-210ENST00000530628 HFM1A2PYH4 1435 aa33.19■■■□□ 2.9
CDKN2A-210ENST00000530628 LRP6O75581 1613 aa33.17■■■□□ 2.9
CDKN2A-210ENST00000530628 MST1RQ04912 1400 aa33.16■■■□□ 2.9
CDKN2A-210ENST00000530628 VGFO15240 615 aaPredicted RBP33.15■■■□□ 2.9
CDKN2A-210ENST00000530628 ASXL1Q8IXJ9 1541 aa33.14■■■□□ 2.9
CDKN2A-210ENST00000530628 SLC4A1APQ9BWU0 796 aaKnown RBP33.14■■■□□ 2.9
CDKN2A-210ENST00000530628 ADGRL3Q9HAR2 1447 aa33.12■■■□□ 2.89
CDKN2A-210ENST00000530628 NALCNQ8IZF0 1738 aa33.11■■■□□ 2.89
CDKN2A-210ENST00000530628 NHSL1Q5SYE7 1610 aa33.11■■■□□ 2.89
CDKN2A-210ENST00000530628 RPGRIP1LQ68CZ1 1315 aa33.09■■■□□ 2.89
CDKN2A-210ENST00000530628 ZNF772Q68DY9 489 aaPredicted RBP33.09■■■□□ 2.89
CDKN2A-210ENST00000530628 SETD1AO15047 1707 aaKnown RBP33.08■■■□□ 2.89
CDKN2A-210ENST00000530628 PPLO60437 1756 aa33.06■■■□□ 2.88
CDKN2A-210ENST00000530628 SETD5Q9C0A6 1442 aa33.06■■■□□ 2.88
CDKN2A-210ENST00000530628 NUTM2BA6NNL0 878 aaPredicted RBP33.06■■■□□ 2.88
CDKN2A-210ENST00000530628 NUTM2EB1AL46 878 aaPredicted RBP33.06■■■□□ 2.88
CDKN2A-210ENST00000530628 NUTM2AQ8IVF1 878 aaPredicted RBP33.06■■■□□ 2.88
CDKN2A-210ENST00000530628 LRRC59Q96AG4 307 aaKnown RBP33.05■■■□□ 2.88
CDKN2A-210ENST00000530628 PTCH1Q13635 1447 aa33.02■■■□□ 2.88
CDKN2A-210ENST00000530628 DDX17Q92841 729 aaKnown RBP32.98■■■□□ 2.87
CDKN2A-210ENST00000530628 C1orf167Q5SNV9 1468 aa32.98■■■□□ 2.87
CDKN2A-210ENST00000530628 ROBO2Q9HCK4 1378 aa32.97■■■□□ 2.87
CDKN2A-210ENST00000530628 FOXD1Q16676 465 aa32.96■■■□□ 2.87
CDKN2A-210ENST00000530628 PRAG1Q86YV5 1406 aa32.93■■■□□ 2.86
CDKN2A-210ENST00000530628 RXRBP28702 533 aa32.92■■■□□ 2.86
CDKN2A-210ENST00000530628 AFF2P51816 1311 aa32.91■■■□□ 2.86
CDKN2A-210ENST00000530628 PNPLA6Q8IY17 1366 aa32.91■■■□□ 2.86
CDKN2A-210ENST00000530628 CCDC144AA2RUR9 1427 aa32.91■■■□□ 2.86
CDKN2A-210ENST00000530628 LAMC1P11047 1609 aa32.88■■■□□ 2.85
CDKN2A-210ENST00000530628 ORAI2Q96SN7 254 aa32.88■■■□□ 2.85
CDKN2A-210ENST00000530628 RGL3Q3MIN7 710 aa32.87■■■□□ 2.85
CDKN2A-210ENST00000530628 MPHOSPH9Q99550 1183 aa32.87■■■□□ 2.85
CDKN2A-210ENST00000530628 C8orf37Q96NL8 207 aa32.86■■■□□ 2.85
CDKN2A-210ENST00000530628 ADGRF5Q8IZF2 1346 aa32.85■■■□□ 2.85
CDKN2A-210ENST00000530628 IFT172Q9UG01 1749 aa32.83■■■□□ 2.85
CDKN2A-210ENST00000530628 SOS2Q07890 1332 aaPredicted RBP32.82■■■□□ 2.84
CDKN2A-210ENST00000530628 ANKRD30BQ9BXX2 1392 aa32.81■■■□□ 2.84
CDKN2A-210ENST00000530628 CDK12Q9NYV4 1490 aaPredicted RBP32.8■■■□□ 2.84
CDKN2A-210ENST00000530628 SPATA31E1Q6ZUB1 1445 aa32.8■■■□□ 2.84
CDKN2A-210ENST00000530628 UPF1Q92900 1129 aaKnown RBP eCLIP32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms