RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
TTC39A-216ENST00000530004 SLIT1O75093 1534 aa20.53■□□□□ 0.88
TTC39A-216ENST00000530004 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.88
TTC39A-216ENST00000530004 ZFYVE9O95405 1425 aa20.52■□□□□ 0.88
TTC39A-216ENST00000530004 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.88
TTC39A-216ENST00000530004 NEXMIFQ5QGS0 1516 aa20.51■□□□□ 0.87
TTC39A-216ENST00000530004 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
TTC39A-216ENST00000530004 HSPA2P54652 639 aa20.51■□□□□ 0.87
TTC39A-216ENST00000530004 HDGFP51858 240 aaKnown RBP20.5■□□□□ 0.87
TTC39A-216ENST00000530004 NUTM2DQ5VT03 806 aaPredicted RBP20.5■□□□□ 0.87
TTC39A-216ENST00000530004 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
TTC39A-216ENST00000530004 LTKP29376 864 aa20.49■□□□□ 0.87
TTC39A-216ENST00000530004 TXNDC2Q86VQ3 553 aa20.49■□□□□ 0.87
TTC39A-216ENST00000530004 STAC3Q96MF2 364 aa20.49■□□□□ 0.87
TTC39A-216ENST00000530004 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
TTC39A-216ENST00000530004 EID1Q9Y6B2 187 aa20.49■□□□□ 0.87
TTC39A-216ENST00000530004 VGFO15240 615 aaPredicted RBP20.48■□□□□ 0.87
TTC39A-216ENST00000530004 ANKLE2Q86XL3 938 aa20.47■□□□□ 0.87
TTC39A-216ENST00000530004 MYOM2P54296 1465 aa20.46■□□□□ 0.87
TTC39A-216ENST00000530004 PPLO60437 1756 aa20.46■□□□□ 0.87
TTC39A-216ENST00000530004 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
TTC39A-216ENST00000530004 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
TTC39A-216ENST00000530004 IFT172Q9UG01 1749 aa20.45■□□□□ 0.86
TTC39A-216ENST00000530004 NBPF8Q3BBV2 869 aa20.44■□□□□ 0.86
TTC39A-216ENST00000530004 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
TTC39A-216ENST00000530004 NCKAP5LQ9HCH0 1330 aa20.41■□□□□ 0.86
TTC39A-216ENST00000530004 PLEKHG1Q9ULL1 1385 aa20.41■□□□□ 0.86
TTC39A-216ENST00000530004 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
TTC39A-216ENST00000530004 PIK3C2GO75747 1445 aa20.4■□□□□ 0.86
TTC39A-216ENST00000530004 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
TTC39A-216ENST00000530004 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
TTC39A-216ENST00000530004 MED14O60244 1454 aa20.38■□□□□ 0.85
TTC39A-216ENST00000530004 BCANQ96GW7 911 aa20.36■□□□□ 0.85
TTC39A-216ENST00000530004 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
TTC39A-216ENST00000530004 SETBP1Q9Y6X0 1596 aa20.35■□□□□ 0.85
TTC39A-216ENST00000530004 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
TTC39A-216ENST00000530004 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
TTC39A-216ENST00000530004 CFAP70Q5T0N1 1121 aa20.34■□□□□ 0.85
TTC39A-216ENST00000530004 C14orf93Q9H972 538 aaKnown RBP20.34■□□□□ 0.85
TTC39A-216ENST00000530004 ADAMTS13Q76LX8 1427 aa20.34■□□□□ 0.85
TTC39A-216ENST00000530004 STRCQ7RTU9 1775 aa20.32■□□□□ 0.84
TTC39A-216ENST00000530004 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
TTC39A-216ENST00000530004 SLC26A8Q96RN1 970 aa20.32■□□□□ 0.84
TTC39A-216ENST00000530004 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
TTC39A-216ENST00000530004 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
TTC39A-216ENST00000530004 EIF4G2P78344 907 aaKnown RBP eCLIP20.3■□□□□ 0.84
TTC39A-216ENST00000530004 TBX22Q9Y458 520 aa20.3■□□□□ 0.84
TTC39A-216ENST00000530004 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
TTC39A-216ENST00000530004 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
TTC39A-216ENST00000530004 NBPF1Q3BBV0 1214 aa20.28■□□□□ 0.84
TTC39A-216ENST00000530004 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
TTC39A-216ENST00000530004 LAMC1P11047 1609 aa20.27■□□□□ 0.83
TTC39A-216ENST00000530004 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
TTC39A-216ENST00000530004 METP08581 1390 aa20.26■□□□□ 0.83
TTC39A-216ENST00000530004 TRPM1Q7Z4N2 1603 aa20.26■□□□□ 0.83
TTC39A-216ENST00000530004 TMEM132EQ6IEE7 984 aa20.26■□□□□ 0.83
TTC39A-216ENST00000530004 ROCK2O75116 1388 aaKnown RBP20.26■□□□□ 0.83
TTC39A-216ENST00000530004 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
TTC39A-216ENST00000530004 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
TTC39A-216ENST00000530004 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
TTC39A-216ENST00000530004 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
TTC39A-216ENST00000530004 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
TTC39A-216ENST00000530004 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
TTC39A-216ENST00000530004 CARD11Q9BXL7 1154 aa20.21■□□□□ 0.83
TTC39A-216ENST00000530004 USP47Q96K76 1375 aa20.2■□□□□ 0.82
TTC39A-216ENST00000530004 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
TTC39A-216ENST00000530004 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
TTC39A-216ENST00000530004 LRPPRCP42704 1394 aaKnown RBP20.18■□□□□ 0.82
TTC39A-216ENST00000530004 STK26Q9P289 416 aa20.17■□□□□ 0.82
TTC39A-216ENST00000530004 AMOTL2Q9Y2J4 779 aa20.17■□□□□ 0.82
TTC39A-216ENST00000530004 KCNA6P17658 529 aa20.16■□□□□ 0.82
TTC39A-216ENST00000530004 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
TTC39A-216ENST00000530004 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
TTC39A-216ENST00000530004 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
TTC39A-216ENST00000530004 TECPR2O15040 1411 aa20.14■□□□□ 0.81
TTC39A-216ENST00000530004 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
TTC39A-216ENST00000530004 CHD2O14647 1828 aaKnown RBP20.12■□□□□ 0.81
TTC39A-216ENST00000530004 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
TTC39A-216ENST00000530004 NWD1Q149M9 1564 aa20.11■□□□□ 0.81
TTC39A-216ENST00000530004 XRN1Q8IZH2 1706 aaKnown RBP20.11■□□□□ 0.81
TTC39A-216ENST00000530004 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
TTC39A-216ENST00000530004 DLC1Q96QB1 1528 aa20.1■□□□□ 0.81
TTC39A-216ENST00000530004 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
TTC39A-216ENST00000530004 PTCH1Q13635 1447 aa20.1■□□□□ 0.81
TTC39A-216ENST00000530004 MIER1Q8N108 512 aa20.09■□□□□ 0.81
TTC39A-216ENST00000530004 CPS1P31327 1500 aa20.09■□□□□ 0.81
TTC39A-216ENST00000530004 C11orf95C9JLR9 678 aaPredicted RBP20.08■□□□□ 0.81
TTC39A-216ENST00000530004 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.81
TTC39A-216ENST00000530004 KNDC1Q76NI1 1749 aa20.08■□□□□ 0.8
TTC39A-216ENST00000530004 FAM135BQ49AJ0 1406 aa20.08■□□□□ 0.8
TTC39A-216ENST00000530004 PRAM1Q96QH2 718 aa20.08■□□□□ 0.8
TTC39A-216ENST00000530004 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
TTC39A-216ENST00000530004 ST20-MTHFSA0A0A6YYL1 179 aa20.07■□□□□ 0.8
TTC39A-216ENST00000530004 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
TTC39A-216ENST00000530004 CCDC7Q96M83 1385 aa20.07■□□□□ 0.8
TTC39A-216ENST00000530004 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
TTC39A-216ENST00000530004 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
TTC39A-216ENST00000530004 POGKQ9P215 609 aa20.06■□□□□ 0.8
TTC39A-216ENST00000530004 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
TTC39A-216ENST00000530004 ARHGEF28Q8N1W1 1705 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms