RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
UBASH3B-205ENST00000529998 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
UBASH3B-205ENST00000529998 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
UBASH3B-205ENST00000529998 ZFYVE9O95405 1425 aa12.83□□□□□ -0.36
UBASH3B-205ENST00000529998 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
UBASH3B-205ENST00000529998 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
UBASH3B-205ENST00000529998 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
UBASH3B-205ENST00000529998 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
UBASH3B-205ENST00000529998 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
UBASH3B-205ENST00000529998 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
UBASH3B-205ENST00000529998 LTBP4Q8N2S1 1624 aa12.79□□□□□ -0.36
UBASH3B-205ENST00000529998 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
UBASH3B-205ENST00000529998 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
UBASH3B-205ENST00000529998 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBASH3B-205ENST00000529998 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.36
UBASH3B-205ENST00000529998 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-205ENST00000529998 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.37
UBASH3B-205ENST00000529998 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
UBASH3B-205ENST00000529998 PPLO60437 1756 aa12.76□□□□□ -0.37
UBASH3B-205ENST00000529998 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
UBASH3B-205ENST00000529998 BCANQ96GW7 911 aa12.76□□□□□ -0.37
UBASH3B-205ENST00000529998 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
UBASH3B-205ENST00000529998 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
UBASH3B-205ENST00000529998 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
UBASH3B-205ENST00000529998 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
UBASH3B-205ENST00000529998 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
UBASH3B-205ENST00000529998 PCGF6Q9BYE7 350 aa12.73□□□□□ -0.37
UBASH3B-205ENST00000529998 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
UBASH3B-205ENST00000529998 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
UBASH3B-205ENST00000529998 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
UBASH3B-205ENST00000529998 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
UBASH3B-205ENST00000529998 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
UBASH3B-205ENST00000529998 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
UBASH3B-205ENST00000529998 DIP2AQ14689 1571 aa12.69□□□□□ -0.38
UBASH3B-205ENST00000529998 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
UBASH3B-205ENST00000529998 CPS1P31327 1500 aa12.69□□□□□ -0.38
UBASH3B-205ENST00000529998 KCNA6P17658 529 aa12.69□□□□□ -0.38
UBASH3B-205ENST00000529998 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-205ENST00000529998 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-205ENST00000529998 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
UBASH3B-205ENST00000529998 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
UBASH3B-205ENST00000529998 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
UBASH3B-205ENST00000529998 METP08581 1390 aa12.67□□□□□ -0.38
UBASH3B-205ENST00000529998 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
UBASH3B-205ENST00000529998 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
UBASH3B-205ENST00000529998 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
UBASH3B-205ENST00000529998 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
UBASH3B-205ENST00000529998 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
UBASH3B-205ENST00000529998 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
UBASH3B-205ENST00000529998 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
UBASH3B-205ENST00000529998 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
UBASH3B-205ENST00000529998 MYOM2P54296 1465 aa12.64□□□□□ -0.39
UBASH3B-205ENST00000529998 PROSER2Q86WR7 435 aaPredicted RBP12.63□□□□□ -0.39
UBASH3B-205ENST00000529998 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
UBASH3B-205ENST00000529998 PIK3C2GO75747 1445 aa12.62□□□□□ -0.39
UBASH3B-205ENST00000529998 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-205ENST00000529998 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-205ENST00000529998 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
UBASH3B-205ENST00000529998 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
UBASH3B-205ENST00000529998 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
UBASH3B-205ENST00000529998 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
UBASH3B-205ENST00000529998 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
UBASH3B-205ENST00000529998 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
UBASH3B-205ENST00000529998 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
UBASH3B-205ENST00000529998 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
UBASH3B-205ENST00000529998 UBAP1LF5GYI3 381 aa12.59□□□□□ -0.39
UBASH3B-205ENST00000529998 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
UBASH3B-205ENST00000529998 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
UBASH3B-205ENST00000529998 LAMC1P11047 1609 aa12.58□□□□□ -0.4
UBASH3B-205ENST00000529998 STK26Q9P289 416 aa12.56□□□□□ -0.4
UBASH3B-205ENST00000529998 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
UBASH3B-205ENST00000529998 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
UBASH3B-205ENST00000529998 TOM1O60784 492 aa12.55□□□□□ -0.4
UBASH3B-205ENST00000529998 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
UBASH3B-205ENST00000529998 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 ADGRB1O14514 1584 aa12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
UBASH3B-205ENST00000529998 ADRA2BP18089 450 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 MSH6P52701 1360 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
UBASH3B-205ENST00000529998 C19orf44Q9H6X5 657 aa12.52□□□□□ -0.41
UBASH3B-205ENST00000529998 TECPR2O15040 1411 aa12.52□□□□□ -0.41
UBASH3B-205ENST00000529998 NBPF1Q3BBV0 1214 aa12.51□□□□□ -0.41
UBASH3B-205ENST00000529998 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
UBASH3B-205ENST00000529998 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
UBASH3B-205ENST00000529998 TONSLQ96HA7 1378 aa12.5□□□□□ -0.41
UBASH3B-205ENST00000529998 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
UBASH3B-205ENST00000529998 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
UBASH3B-205ENST00000529998 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
UBASH3B-205ENST00000529998 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
UBASH3B-205ENST00000529998 SIRT1Q96EB6 747 aa12.49□□□□□ -0.41
UBASH3B-205ENST00000529998 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
UBASH3B-205ENST00000529998 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms