RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 TOM1O60784 492 aa19.01■□□□□ 0.63
PACS1-210ENST00000529795 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
PACS1-210ENST00000529795 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
PACS1-210ENST00000529795 PLEKHG1Q9ULL1 1385 aa18.97■□□□□ 0.63
PACS1-210ENST00000529795 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
PACS1-210ENST00000529795 KIF1BO60333 1816 aa18.95■□□□□ 0.62
PACS1-210ENST00000529795 KCNA6P17658 529 aa18.95■□□□□ 0.62
PACS1-210ENST00000529795 TRPM2O94759 1503 aa18.94■□□□□ 0.62
PACS1-210ENST00000529795 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
PACS1-210ENST00000529795 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
PACS1-210ENST00000529795 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
PACS1-210ENST00000529795 STRCP1A6NGW2 1772 aa18.92■□□□□ 0.62
PACS1-210ENST00000529795 LRRC7Q96NW7 1537 aa18.91■□□□□ 0.62
PACS1-210ENST00000529795 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
PACS1-210ENST00000529795 DIP2AQ14689 1571 aa18.89■□□□□ 0.62
PACS1-210ENST00000529795 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
PACS1-210ENST00000529795 PIK3R4Q99570 1358 aa18.88■□□□□ 0.61
PACS1-210ENST00000529795 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
PACS1-210ENST00000529795 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
PACS1-210ENST00000529795 MPHOSPH9Q99550 1183 aa18.87■□□□□ 0.61
PACS1-210ENST00000529795 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
PACS1-210ENST00000529795 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
PACS1-210ENST00000529795 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
PACS1-210ENST00000529795 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
PACS1-210ENST00000529795 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
PACS1-210ENST00000529795 NUTM2DQ5VT03 806 aaPredicted RBP18.84■□□□□ 0.61
PACS1-210ENST00000529795 NWD1Q149M9 1564 aa18.84■□□□□ 0.61
PACS1-210ENST00000529795 HRCP23327 699 aa18.83■□□□□ 0.6
PACS1-210ENST00000529795 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
PACS1-210ENST00000529795 NCOA3Q9Y6Q9 1424 aa18.82■□□□□ 0.6
PACS1-210ENST00000529795 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
PACS1-210ENST00000529795 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
PACS1-210ENST00000529795 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
PACS1-210ENST00000529795 MSH6P52701 1360 aa18.8■□□□□ 0.6
PACS1-210ENST00000529795 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
PACS1-210ENST00000529795 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
PACS1-210ENST00000529795 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
PACS1-210ENST00000529795 NEXMIFQ5QGS0 1516 aa18.78■□□□□ 0.6
PACS1-210ENST00000529795 FOXD1Q16676 465 aa18.75■□□□□ 0.59
PACS1-210ENST00000529795 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
PACS1-210ENST00000529795 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
PACS1-210ENST00000529795 PPLO60437 1756 aa18.73■□□□□ 0.59
PACS1-210ENST00000529795 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
PACS1-210ENST00000529795 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
PACS1-210ENST00000529795 HSPA1LP34931 641 aa18.72■□□□□ 0.59
PACS1-210ENST00000529795 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
PACS1-210ENST00000529795 ALKQ9UM73 1620 aa18.71■□□□□ 0.59
PACS1-210ENST00000529795 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
PACS1-210ENST00000529795 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
PACS1-210ENST00000529795 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
PACS1-210ENST00000529795 ATF3P18847 181 aa18.69■□□□□ 0.58
PACS1-210ENST00000529795 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
PACS1-210ENST00000529795 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
PACS1-210ENST00000529795 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
PACS1-210ENST00000529795 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
PACS1-210ENST00000529795 METP08581 1390 aa18.66■□□□□ 0.58
PACS1-210ENST00000529795 DISP3Q9P2K9 1392 aa18.66■□□□□ 0.58
PACS1-210ENST00000529795 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
PACS1-210ENST00000529795 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.64■□□□□ 0.57
PACS1-210ENST00000529795 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
PACS1-210ENST00000529795 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
PACS1-210ENST00000529795 DCCP43146 1447 aa18.64■□□□□ 0.57
PACS1-210ENST00000529795 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
PACS1-210ENST00000529795 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
PACS1-210ENST00000529795 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
PACS1-210ENST00000529795 ADGRF5Q8IZF2 1346 aa18.6■□□□□ 0.57
PACS1-210ENST00000529795 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
PACS1-210ENST00000529795 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
PACS1-210ENST00000529795 MYOM2P54296 1465 aa18.56■□□□□ 0.56
PACS1-210ENST00000529795 PIK3C2GO75747 1445 aa18.56■□□□□ 0.56
PACS1-210ENST00000529795 LAMC1P11047 1609 aa18.56■□□□□ 0.56
PACS1-210ENST00000529795 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
PACS1-210ENST00000529795 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
PACS1-210ENST00000529795 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
PACS1-210ENST00000529795 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.55
PACS1-210ENST00000529795 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
PACS1-210ENST00000529795 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
PACS1-210ENST00000529795 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
PACS1-210ENST00000529795 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
PACS1-210ENST00000529795 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
PACS1-210ENST00000529795 ROBO2Q9HCK4 1378 aa18.51■□□□□ 0.55
PACS1-210ENST00000529795 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
PACS1-210ENST00000529795 TECPR2O15040 1411 aa18.5■□□□□ 0.55
PACS1-210ENST00000529795 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
PACS1-210ENST00000529795 DCAF11Q8TEB1 546 aa18.5■□□□□ 0.55
PACS1-210ENST00000529795 STK26Q9P289 416 aa18.5■□□□□ 0.55
PACS1-210ENST00000529795 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
PACS1-210ENST00000529795 JCADQ9P266 1359 aa18.49■□□□□ 0.55
PACS1-210ENST00000529795 MST1RQ04912 1400 aa18.49■□□□□ 0.55
PACS1-210ENST00000529795 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
PACS1-210ENST00000529795 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
PACS1-210ENST00000529795 AHDC1Q5TGY3 1603 aaPredicted RBP18.48■□□□□ 0.55
PACS1-210ENST00000529795 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
PACS1-210ENST00000529795 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
PACS1-210ENST00000529795 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
PACS1-210ENST00000529795 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
PACS1-210ENST00000529795 COL16A1Q07092 1604 aaPredicted RBP18.44■□□□□ 0.54
PACS1-210ENST00000529795 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
PACS1-210ENST00000529795 SPATA31A6Q5VVP1 1343 aa18.44■□□□□ 0.54
PACS1-210ENST00000529795 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms