RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 E9PCH4 1651 aa31.8■■■□□ 2.68
SF3B2-207ENST00000529577 KCNA6P17658 529 aa31.79■■■□□ 2.68
SF3B2-207ENST00000529577 SLC52A1Q9NWF4 448 aa31.79■■■□□ 2.68
SF3B2-207ENST00000529577 IQGAP3Q86VI3 1631 aa31.72■■■□□ 2.67
SF3B2-207ENST00000529577 FAM135BQ49AJ0 1406 aa31.72■■■□□ 2.67
SF3B2-207ENST00000529577 CHD2O14647 1828 aaKnown RBP31.71■■■□□ 2.67
SF3B2-207ENST00000529577 RIMS2Q9UQ26 1411 aa31.71■■■□□ 2.67
SF3B2-207ENST00000529577 ROCK1Q13464 1354 aa31.7■■■□□ 2.67
SF3B2-207ENST00000529577 RGS17Q9UGC6 210 aaPredicted RBP31.7■■■□□ 2.67
SF3B2-207ENST00000529577 ROBO1Q9Y6N7 1651 aa31.7■■■□□ 2.66
SF3B2-207ENST00000529577 NKTRP30414 1462 aaKnown RBP31.69■■■□□ 2.66
SF3B2-207ENST00000529577 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
SF3B2-207ENST00000529577 PROSER2Q86WR7 435 aaPredicted RBP31.67■■■□□ 2.66
SF3B2-207ENST00000529577 PPARGC1BQ86YN6 1023 aaKnown RBP31.67■■■□□ 2.66
SF3B2-207ENST00000529577 ADAMTS13Q76LX8 1427 aa31.64■■■□□ 2.66
SF3B2-207ENST00000529577 NUTM2DQ5VT03 806 aaPredicted RBP31.61■■■□□ 2.65
SF3B2-207ENST00000529577 PHF23Q9BUL5 403 aaPredicted RBP31.59■■■□□ 2.65
SF3B2-207ENST00000529577 ITGAEP38570 1179 aa31.56■■■□□ 2.64
SF3B2-207ENST00000529577 BCANQ96GW7 911 aa31.56■■■□□ 2.64
SF3B2-207ENST00000529577 NUP155O75694 1391 aa31.56■■■□□ 2.64
SF3B2-207ENST00000529577 TBX22Q9Y458 520 aa31.55■■■□□ 2.64
SF3B2-207ENST00000529577 CHGAP10645 457 aaKnown RBP31.54■■■□□ 2.64
SF3B2-207ENST00000529577 PTPRUQ92729 1446 aa31.51■■■□□ 2.64
SF3B2-207ENST00000529577 NRXN3Q9Y4C0 1643 aa31.51■■■□□ 2.63
SF3B2-207ENST00000529577 PPP1R15AO75807 674 aaPredicted RBP31.5■■■□□ 2.63
SF3B2-207ENST00000529577 MSH6P52701 1360 aa31.5■■■□□ 2.63
SF3B2-207ENST00000529577 SLAIN2Q9P270 581 aa31.48■■■□□ 2.63
SF3B2-207ENST00000529577 DIP2AQ14689 1571 aa31.47■■■□□ 2.63
SF3B2-207ENST00000529577 PHLPP1O60346 1717 aa31.47■■■□□ 2.63
SF3B2-207ENST00000529577 SPHKAPQ2M3C7 1700 aa31.47■■■□□ 2.63
SF3B2-207ENST00000529577 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.46■■■□□ 2.63
SF3B2-207ENST00000529577 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.45■■■□□ 2.63
SF3B2-207ENST00000529577 COL16A1Q07092 1604 aaPredicted RBP31.45■■■□□ 2.62
SF3B2-207ENST00000529577 POTEAQ6S8J7 498 aa31.44■■■□□ 2.62
SF3B2-207ENST00000529577 HDGFP51858 240 aaKnown RBP31.42■■■□□ 2.62
SF3B2-207ENST00000529577 NCOA3Q9Y6Q9 1424 aa31.41■■■□□ 2.62
SF3B2-207ENST00000529577 PIK3R4Q99570 1358 aa31.39■■■□□ 2.62
SF3B2-207ENST00000529577 TRPM2O94759 1503 aa31.39■■■□□ 2.61
SF3B2-207ENST00000529577 CLTCL1P53675 1640 aa31.38■■■□□ 2.61
SF3B2-207ENST00000529577 XRN1Q8IZH2 1706 aaKnown RBP31.38■■■□□ 2.61
SF3B2-207ENST00000529577 RRBP1Q9P2E9 1410 aaKnown RBP31.38■■■□□ 2.61
SF3B2-207ENST00000529577 SETBP1Q9Y6X0 1596 aa31.37■■■□□ 2.61
SF3B2-207ENST00000529577 NAIPQ13075 1403 aa31.34■■■□□ 2.61
SF3B2-207ENST00000529577 AMOTL2Q9Y2J4 779 aa31.34■■■□□ 2.61
SF3B2-207ENST00000529577 LRP6O75581 1613 aa31.33■■■□□ 2.61
SF3B2-207ENST00000529577 NEXMIFQ5QGS0 1516 aa31.33■■■□□ 2.61
SF3B2-207ENST00000529577 METP08581 1390 aa31.31■■■□□ 2.6
SF3B2-207ENST00000529577 AHDC1Q5TGY3 1603 aaPredicted RBP31.31■■■□□ 2.6
SF3B2-207ENST00000529577 JCADQ9P266 1359 aa31.3■■■□□ 2.6
SF3B2-207ENST00000529577 C19orf44Q9H6X5 657 aa31.29■■■□□ 2.6
SF3B2-207ENST00000529577 C14orf37Q86TY3 774 aa31.24■■■□□ 2.59
SF3B2-207ENST00000529577 SETD1AO15047 1707 aaKnown RBP31.24■■■□□ 2.59
SF3B2-207ENST00000529577 CADPS2Q86UW7 1296 aa31.23■■■□□ 2.59
SF3B2-207ENST00000529577 SHPRHQ149N8 1683 aa31.22■■■□□ 2.59
SF3B2-207ENST00000529577 BRINP3Q76B58 766 aa31.22■■■□□ 2.59
SF3B2-207ENST00000529577 ZNF326Q5BKZ1 582 aaKnown RBP31.2■■■□□ 2.59
SF3B2-207ENST00000529577 MST1RQ04912 1400 aa31.2■■■□□ 2.59
SF3B2-207ENST00000529577 NALCNQ8IZF0 1738 aa31.19■■■□□ 2.58
SF3B2-207ENST00000529577 ATF3P18847 181 aa31.19■■■□□ 2.58
SF3B2-207ENST00000529577 KIF1BO60333 1816 aa31.19■■■□□ 2.58
SF3B2-207ENST00000529577 ASXL1Q8IXJ9 1541 aa31.18■■■□□ 2.58
SF3B2-207ENST00000529577 DCCP43146 1447 aa31.17■■■□□ 2.58
SF3B2-207ENST00000529577 NHSL1Q5SYE7 1610 aa31.16■■■□□ 2.58
SF3B2-207ENST00000529577 HFM1A2PYH4 1435 aa31.14■■■□□ 2.58
SF3B2-207ENST00000529577 SPATA31A6Q5VVP1 1343 aa31.11■■■□□ 2.57
SF3B2-207ENST00000529577 ADGRL3Q9HAR2 1447 aa31.1■■■□□ 2.57
SF3B2-207ENST00000529577 DDX17Q92841 729 aaKnown RBP31.09■■■□□ 2.57
SF3B2-207ENST00000529577 PPLO60437 1756 aa31.06■■■□□ 2.56
SF3B2-207ENST00000529577 SETD5Q9C0A6 1442 aa31.06■■■□□ 2.56
SF3B2-207ENST00000529577 ROBO2Q9HCK4 1378 aa31.05■■■□□ 2.56
SF3B2-207ENST00000529577 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
SF3B2-207ENST00000529577 FOXD1Q16676 465 aa31.02■■■□□ 2.56
SF3B2-207ENST00000529577 PTCH1Q13635 1447 aa30.99■■■□□ 2.55
SF3B2-207ENST00000529577 PRAG1Q86YV5 1406 aa30.99■■■□□ 2.55
SF3B2-207ENST00000529577 LAMC1P11047 1609 aa30.98■■■□□ 2.55
SF3B2-207ENST00000529577 C1orf167Q5SNV9 1468 aa30.98■■■□□ 2.55
SF3B2-207ENST00000529577 SLC4A1APQ9BWU0 796 aaKnown RBP30.98■■■□□ 2.55
SF3B2-207ENST00000529577 NUTM2BA6NNL0 878 aaPredicted RBP30.97■■■□□ 2.55
SF3B2-207ENST00000529577 NUTM2EB1AL46 878 aaPredicted RBP30.97■■■□□ 2.55
SF3B2-207ENST00000529577 NUTM2AQ8IVF1 878 aaPredicted RBP30.97■■■□□ 2.55
SF3B2-207ENST00000529577 MEX3CQ5U5Q3 659 aaKnown RBP30.95■■■□□ 2.55
SF3B2-207ENST00000529577 PNPLA6Q8IY17 1366 aa30.94■■■□□ 2.54
SF3B2-207ENST00000529577 VGFO15240 615 aaPredicted RBP30.93■■■□□ 2.54
SF3B2-207ENST00000529577 IFT172Q9UG01 1749 aa30.91■■■□□ 2.54
SF3B2-207ENST00000529577 ZNF772Q68DY9 489 aaPredicted RBP30.91■■■□□ 2.54
SF3B2-207ENST00000529577 ORAI2Q96SN7 254 aa30.91■■■□□ 2.54
SF3B2-207ENST00000529577 RPGRIP1LQ68CZ1 1315 aa30.91■■■□□ 2.54
SF3B2-207ENST00000529577 ADGRF5Q8IZF2 1346 aa30.9■■■□□ 2.54
SF3B2-207ENST00000529577 SPATA31E1Q6ZUB1 1445 aa30.89■■■□□ 2.53
SF3B2-207ENST00000529577 AFF2P51816 1311 aa30.88■■■□□ 2.53
SF3B2-207ENST00000529577 LRRC59Q96AG4 307 aaKnown RBP30.87■■■□□ 2.53
SF3B2-207ENST00000529577 SOS2Q07890 1332 aaPredicted RBP30.83■■■□□ 2.53
SF3B2-207ENST00000529577 UPF1Q92900 1129 aaKnown RBP eCLIP30.83■■■□□ 2.53
SF3B2-207ENST00000529577 RXRBP28702 533 aa30.8■■■□□ 2.52
SF3B2-207ENST00000529577 CDK12Q9NYV4 1490 aaPredicted RBP30.79■■■□□ 2.52
SF3B2-207ENST00000529577 MPHOSPH9Q99550 1183 aa30.79■■■□□ 2.52
SF3B2-207ENST00000529577 CDC42BPGQ6DT37 1551 aa30.79■■■□□ 2.52
SF3B2-207ENST00000529577 C8orf37Q96NL8 207 aa30.77■■■□□ 2.52
SF3B2-207ENST00000529577 CCDC144AA2RUR9 1427 aa30.76■■■□□ 2.51
SF3B2-207ENST00000529577 RGS12O14924 1447 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms