RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 LMTK2Q8IWU2 1503 aa9.7□□□□□ -0.86
CHRNA6-202ENST00000529467 TET3O43151 1660 aa9.69□□□□□ -0.86
CHRNA6-202ENST00000529467 KDM5AP29375 1690 aaKnown RBP9.69□□□□□ -0.86
CHRNA6-202ENST00000529467 APLP2Q06481 763 aa9.69□□□□□ -0.86
CHRNA6-202ENST00000529467 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 NOS1P29475 1434 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 TMEM94Q12767 1356 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 ANKRD30AQ9BXX3 1397 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 SLC26A8Q96RN1 970 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 SLC52A1Q9NWF4 448 aa9.68□□□□□ -0.86
CHRNA6-202ENST00000529467 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
CHRNA6-202ENST00000529467 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
CHRNA6-202ENST00000529467 POTEAQ6S8J7 498 aa9.65□□□□□ -0.86
CHRNA6-202ENST00000529467 ADGRL2O95490 1459 aa9.64□□□□□ -0.87
CHRNA6-202ENST00000529467 ROBO1Q9Y6N7 1651 aa9.64□□□□□ -0.87
CHRNA6-202ENST00000529467 BCANQ96GW7 911 aa9.63□□□□□ -0.87
CHRNA6-202ENST00000529467 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
CHRNA6-202ENST00000529467 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
CHRNA6-202ENST00000529467 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
CHRNA6-202ENST00000529467 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
CHRNA6-202ENST00000529467 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
CHRNA6-202ENST00000529467 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
CHRNA6-202ENST00000529467 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
CHRNA6-202ENST00000529467 ZFYVE9O95405 1425 aa9.62□□□□□ -0.87
CHRNA6-202ENST00000529467 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 RPRD2Q5VT52 1461 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 FAM50AQ14320 339 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 ANKRD50Q9ULJ7 1429 aa9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 MSH6P52701 1360 aa9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
CHRNA6-202ENST00000529467 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
CHRNA6-202ENST00000529467 TMEM131LA2VDJ0 1609 aa9.59□□□□□ -0.87
CHRNA6-202ENST00000529467 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 NCOA3Q9Y6Q9 1424 aa9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 PHLPP1O60346 1717 aa9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 JCADQ9P266 1359 aa9.58□□□□□ -0.88
CHRNA6-202ENST00000529467 CHGAP10645 457 aaKnown RBP9.57□□□□□ -0.88
CHRNA6-202ENST00000529467 DSG3P32926 999 aa9.57□□□□□ -0.88
CHRNA6-202ENST00000529467 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
CHRNA6-202ENST00000529467 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
CHRNA6-202ENST00000529467 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
CHRNA6-202ENST00000529467 SPINK5Q9NQ38 1064 aaPredicted RBP9.56□□□□□ -0.88
CHRNA6-202ENST00000529467 E9PCH4 1651 aa9.55□□□□□ -0.88
CHRNA6-202ENST00000529467 COL16A1Q07092 1604 aaPredicted RBP9.55□□□□□ -0.88
CHRNA6-202ENST00000529467 UNC13BO14795 1591 aa9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 PIK3R4Q99570 1358 aa9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 CADPS2Q86UW7 1296 aa9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 SPATA31A6Q5VVP1 1343 aa9.54□□□□□ -0.88
CHRNA6-202ENST00000529467 ROCK1Q13464 1354 aa9.53□□□□□ -0.88
CHRNA6-202ENST00000529467 ATF3P18847 181 aa9.53□□□□□ -0.88
CHRNA6-202ENST00000529467 C14orf37Q86TY3 774 aa9.53□□□□□ -0.88
CHRNA6-202ENST00000529467 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
CHRNA6-202ENST00000529467 LRP6O75581 1613 aa9.52□□□□□ -0.89
CHRNA6-202ENST00000529467 IQGAP3Q86VI3 1631 aa9.52□□□□□ -0.89
CHRNA6-202ENST00000529467 NUP155O75694 1391 aa9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 SETD1AO15047 1707 aaKnown RBP9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 DIP2AQ14689 1571 aa9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 ZNF772Q68DY9 489 aaPredicted RBP9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 BRINP3Q76B58 766 aa9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 AHDC1Q5TGY3 1603 aaPredicted RBP9.51□□□□□ -0.89
CHRNA6-202ENST00000529467 CAPN15O75808 1086 aa9.5□□□□□ -0.89
CHRNA6-202ENST00000529467 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
CHRNA6-202ENST00000529467 TRPM2O94759 1503 aa9.5□□□□□ -0.89
CHRNA6-202ENST00000529467 SHPRHQ149N8 1683 aa9.49□□□□□ -0.89
CHRNA6-202ENST00000529467 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHRNA6-202ENST00000529467 TRIM52Q96A61 297 aa9.48□□□□□ -0.89
CHRNA6-202ENST00000529467 NRXN3Q9Y4C0 1643 aa9.48□□□□□ -0.89
CHRNA6-202ENST00000529467 DCCP43146 1447 aa9.48□□□□□ -0.89
CHRNA6-202ENST00000529467 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 RXRBP28702 533 aa9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 ITGAEP38570 1179 aa9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 METP08581 1390 aa9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 MST1RQ04912 1400 aa9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 SETD5Q9C0A6 1442 aa9.47□□□□□ -0.89
CHRNA6-202ENST00000529467 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
CHRNA6-202ENST00000529467 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
CHRNA6-202ENST00000529467 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
CHRNA6-202ENST00000529467 LRRC59Q96AG4 307 aaKnown RBP9.46□□□□□ -0.9
CHRNA6-202ENST00000529467 SPHKAPQ2M3C7 1700 aa9.45□□□□□ -0.9
CHRNA6-202ENST00000529467 DDX17Q92841 729 aaKnown RBP9.45□□□□□ -0.9
CHRNA6-202ENST00000529467 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
CHRNA6-202ENST00000529467 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
CHRNA6-202ENST00000529467 AFF2P51816 1311 aa9.44□□□□□ -0.9
CHRNA6-202ENST00000529467 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
CHRNA6-202ENST00000529467 CDK12Q9NYV4 1490 aaPredicted RBP9.43□□□□□ -0.9
CHRNA6-202ENST00000529467 POTEHQ6S545 545 aa9.43□□□□□ -0.9
CHRNA6-202ENST00000529467 ADGRL3Q9HAR2 1447 aa9.42□□□□□ -0.9
CHRNA6-202ENST00000529467 PNPLA6Q8IY17 1366 aa9.42□□□□□ -0.9
CHRNA6-202ENST00000529467 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
CHRNA6-202ENST00000529467 ZNF219Q9P2Y4 722 aaPredicted RBP9.42□□□□□ -0.9
CHRNA6-202ENST00000529467 NEXMIFQ5QGS0 1516 aa9.41□□□□□ -0.9
CHRNA6-202ENST00000529467 KIF1BO60333 1816 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms