RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
SORL1-208ENST00000529445 NWD1Q149M9 1564 aa18.43■□□□□ 0.54
SORL1-208ENST00000529445 HSPA1LP34931 641 aa18.42■□□□□ 0.54
SORL1-208ENST00000529445 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
SORL1-208ENST00000529445 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
SORL1-208ENST00000529445 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
SORL1-208ENST00000529445 PLEKHG1Q9ULL1 1385 aa18.41■□□□□ 0.54
SORL1-208ENST00000529445 SLC26A8Q96RN1 970 aa18.4■□□□□ 0.54
SORL1-208ENST00000529445 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
SORL1-208ENST00000529445 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.53
SORL1-208ENST00000529445 KCNA6P17658 529 aa18.38■□□□□ 0.53
SORL1-208ENST00000529445 BCANQ96GW7 911 aa18.38■□□□□ 0.53
SORL1-208ENST00000529445 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
SORL1-208ENST00000529445 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
SORL1-208ENST00000529445 DIP2AQ14689 1571 aa18.37■□□□□ 0.53
SORL1-208ENST00000529445 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
SORL1-208ENST00000529445 TMEM94Q12767 1356 aa18.36■□□□□ 0.53
SORL1-208ENST00000529445 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.36■□□□□ 0.53
SORL1-208ENST00000529445 NAIPQ13075 1403 aa18.35■□□□□ 0.53
SORL1-208ENST00000529445 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
SORL1-208ENST00000529445 PROSER2Q86WR7 435 aaPredicted RBP18.32■□□□□ 0.52
SORL1-208ENST00000529445 TRPM2O94759 1503 aa18.31■□□□□ 0.52
SORL1-208ENST00000529445 HFM1A2PYH4 1435 aa18.31■□□□□ 0.52
SORL1-208ENST00000529445 ADAMTS13Q76LX8 1427 aa18.3■□□□□ 0.52
SORL1-208ENST00000529445 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
SORL1-208ENST00000529445 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
SORL1-208ENST00000529445 MSH6P52701 1360 aa18.29■□□□□ 0.52
SORL1-208ENST00000529445 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
SORL1-208ENST00000529445 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
SORL1-208ENST00000529445 PIK3R4Q99570 1358 aa18.28■□□□□ 0.52
SORL1-208ENST00000529445 KIF1BO60333 1816 aa18.28■□□□□ 0.52
SORL1-208ENST00000529445 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
SORL1-208ENST00000529445 SETBP1Q9Y6X0 1596 aa18.26■□□□□ 0.51
SORL1-208ENST00000529445 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
SORL1-208ENST00000529445 SOCS7O14512 581 aa18.25■□□□□ 0.51
SORL1-208ENST00000529445 RBM33Q96EV2 1170 aaKnown RBP18.25■□□□□ 0.51
SORL1-208ENST00000529445 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
SORL1-208ENST00000529445 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
SORL1-208ENST00000529445 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
SORL1-208ENST00000529445 XRN1Q8IZH2 1706 aaKnown RBP18.21■□□□□ 0.51
SORL1-208ENST00000529445 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
SORL1-208ENST00000529445 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
SORL1-208ENST00000529445 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
SORL1-208ENST00000529445 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
SORL1-208ENST00000529445 PTPRUQ92729 1446 aa18.17■□□□□ 0.5
SORL1-208ENST00000529445 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
SORL1-208ENST00000529445 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
SORL1-208ENST00000529445 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
SORL1-208ENST00000529445 PPLO60437 1756 aa18.13■□□□□ 0.49
SORL1-208ENST00000529445 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
SORL1-208ENST00000529445 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
SORL1-208ENST00000529445 DCCP43146 1447 aa18.13■□□□□ 0.49
SORL1-208ENST00000529445 SETD1AO15047 1707 aaKnown RBP18.12■□□□□ 0.49
SORL1-208ENST00000529445 ATF3P18847 181 aa18.12■□□□□ 0.49
SORL1-208ENST00000529445 METP08581 1390 aa18.12■□□□□ 0.49
SORL1-208ENST00000529445 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
SORL1-208ENST00000529445 AHDC1Q5TGY3 1603 aaPredicted RBP18.1■□□□□ 0.49
SORL1-208ENST00000529445 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
SORL1-208ENST00000529445 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
SORL1-208ENST00000529445 JCADQ9P266 1359 aa18.08■□□□□ 0.49
SORL1-208ENST00000529445 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.48
SORL1-208ENST00000529445 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
SORL1-208ENST00000529445 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
SORL1-208ENST00000529445 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
SORL1-208ENST00000529445 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
SORL1-208ENST00000529445 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
SORL1-208ENST00000529445 SHPRHQ149N8 1683 aa18.05■□□□□ 0.48
SORL1-208ENST00000529445 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
SORL1-208ENST00000529445 FOXD1Q16676 465 aa18.04■□□□□ 0.48
SORL1-208ENST00000529445 MST1RQ04912 1400 aa18.04■□□□□ 0.48
SORL1-208ENST00000529445 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
SORL1-208ENST00000529445 NHSL1Q5SYE7 1610 aa18.03■□□□□ 0.48
SORL1-208ENST00000529445 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
SORL1-208ENST00000529445 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
SORL1-208ENST00000529445 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
SORL1-208ENST00000529445 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
SORL1-208ENST00000529445 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
SORL1-208ENST00000529445 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
SORL1-208ENST00000529445 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
SORL1-208ENST00000529445 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
SORL1-208ENST00000529445 LRP6O75581 1613 aa17.96■□□□□ 0.47
SORL1-208ENST00000529445 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
SORL1-208ENST00000529445 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
SORL1-208ENST00000529445 RGL3Q3MIN7 710 aa17.94■□□□□ 0.46
SORL1-208ENST00000529445 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
SORL1-208ENST00000529445 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
SORL1-208ENST00000529445 LAMC1P11047 1609 aa17.94■□□□□ 0.46
SORL1-208ENST00000529445 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
SORL1-208ENST00000529445 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
SORL1-208ENST00000529445 TECPR2O15040 1411 aa17.91■□□□□ 0.46
SORL1-208ENST00000529445 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
SORL1-208ENST00000529445 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
SORL1-208ENST00000529445 MYOM2P54296 1465 aa17.89■□□□□ 0.45
SORL1-208ENST00000529445 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
SORL1-208ENST00000529445 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
SORL1-208ENST00000529445 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
SORL1-208ENST00000529445 ABCC11Q96J66 1382 aa17.86■□□□□ 0.45
SORL1-208ENST00000529445 ZNF772Q68DY9 489 aaPredicted RBP17.85■□□□□ 0.45
SORL1-208ENST00000529445 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
SORL1-208ENST00000529445 DDX17Q92841 729 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms