RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 ZFYVE9O95405 1425 aa21.02■□□□□ 0.96
UBXN1-209ENST00000528907 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
UBXN1-209ENST00000528907 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
UBXN1-209ENST00000528907 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
UBXN1-209ENST00000528907 PPLO60437 1756 aa20.99■□□□□ 0.95
UBXN1-209ENST00000528907 MED14O60244 1454 aa20.98■□□□□ 0.95
UBXN1-209ENST00000528907 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
UBXN1-209ENST00000528907 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
UBXN1-209ENST00000528907 RIMS2Q9UQ26 1411 aa20.96■□□□□ 0.95
UBXN1-209ENST00000528907 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
UBXN1-209ENST00000528907 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
UBXN1-209ENST00000528907 ANKLE2Q86XL3 938 aa20.95■□□□□ 0.94
UBXN1-209ENST00000528907 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.95■□□□□ 0.94
UBXN1-209ENST00000528907 LTBP4Q8N2S1 1624 aa20.95■□□□□ 0.94
UBXN1-209ENST00000528907 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
UBXN1-209ENST00000528907 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
UBXN1-209ENST00000528907 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
UBXN1-209ENST00000528907 MYOM2P54296 1465 aa20.92■□□□□ 0.94
UBXN1-209ENST00000528907 LTKP29376 864 aa20.91■□□□□ 0.94
UBXN1-209ENST00000528907 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
UBXN1-209ENST00000528907 TXNDC2Q86VQ3 553 aa20.91■□□□□ 0.94
UBXN1-209ENST00000528907 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
UBXN1-209ENST00000528907 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
UBXN1-209ENST00000528907 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
UBXN1-209ENST00000528907 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-209ENST00000528907 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
UBXN1-209ENST00000528907 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
UBXN1-209ENST00000528907 SETBP1Q9Y6X0 1596 aa20.88■□□□□ 0.93
UBXN1-209ENST00000528907 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-209ENST00000528907 NCKAP5LQ9HCH0 1330 aa20.87■□□□□ 0.93
UBXN1-209ENST00000528907 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
UBXN1-209ENST00000528907 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
UBXN1-209ENST00000528907 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
UBXN1-209ENST00000528907 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
UBXN1-209ENST00000528907 PIK3C2GO75747 1445 aa20.82■□□□□ 0.92
UBXN1-209ENST00000528907 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-209ENST00000528907 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
UBXN1-209ENST00000528907 LAMC1P11047 1609 aa20.81■□□□□ 0.92
UBXN1-209ENST00000528907 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
UBXN1-209ENST00000528907 SETD1AO15047 1707 aaKnown RBP20.81■□□□□ 0.92
UBXN1-209ENST00000528907 DCAF11Q8TEB1 546 aa20.8■□□□□ 0.92
UBXN1-209ENST00000528907 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
UBXN1-209ENST00000528907 ADGRF5Q8IZF2 1346 aa20.79■□□□□ 0.92
UBXN1-209ENST00000528907 KIAA1210Q9ULL0 1709 aa20.78■□□□□ 0.92
UBXN1-209ENST00000528907 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
UBXN1-209ENST00000528907 TBX22Q9Y458 520 aa20.78■□□□□ 0.92
UBXN1-209ENST00000528907 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
UBXN1-209ENST00000528907 PIK3R4Q99570 1358 aa20.76■□□□□ 0.91
UBXN1-209ENST00000528907 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
UBXN1-209ENST00000528907 PRAG1Q86YV5 1406 aa20.75■□□□□ 0.91
UBXN1-209ENST00000528907 C14orf93Q9H972 538 aaKnown RBP20.73■□□□□ 0.91
UBXN1-209ENST00000528907 CHD2O14647 1828 aaKnown RBP20.73■□□□□ 0.91
UBXN1-209ENST00000528907 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
UBXN1-209ENST00000528907 ZNF335Q9H4Z2 1342 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-209ENST00000528907 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
UBXN1-209ENST00000528907 SLC26A8Q96RN1 970 aa20.7■□□□□ 0.9
UBXN1-209ENST00000528907 TRPM1Q7Z4N2 1603 aa20.69■□□□□ 0.9
UBXN1-209ENST00000528907 BCANQ96GW7 911 aa20.69■□□□□ 0.9
UBXN1-209ENST00000528907 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
UBXN1-209ENST00000528907 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
UBXN1-209ENST00000528907 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
UBXN1-209ENST00000528907 METP08581 1390 aa20.66■□□□□ 0.9
UBXN1-209ENST00000528907 KNDC1Q76NI1 1749 aa20.66■□□□□ 0.9
UBXN1-209ENST00000528907 STRCP1A6NGW2 1772 aa20.66■□□□□ 0.9
UBXN1-209ENST00000528907 KCNA6P17658 529 aa20.65■□□□□ 0.9
UBXN1-209ENST00000528907 CFAP70Q5T0N1 1121 aa20.65■□□□□ 0.9
UBXN1-209ENST00000528907 CPS1P31327 1500 aa20.64■□□□□ 0.9
UBXN1-209ENST00000528907 NKTRP30414 1462 aaKnown RBP20.64■□□□□ 0.89
UBXN1-209ENST00000528907 PTPRUQ92729 1446 aa20.64■□□□□ 0.89
UBXN1-209ENST00000528907 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
UBXN1-209ENST00000528907 TECPR2O15040 1411 aa20.62■□□□□ 0.89
UBXN1-209ENST00000528907 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
UBXN1-209ENST00000528907 LRPPRCP42704 1394 aaKnown RBP20.61■□□□□ 0.89
UBXN1-209ENST00000528907 GPRASP1Q5JY77 1395 aa20.6■□□□□ 0.89
UBXN1-209ENST00000528907 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
UBXN1-209ENST00000528907 YTHDC2Q9H6S0 1430 aaKnown RBP20.6■□□□□ 0.89
UBXN1-209ENST00000528907 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-209ENST00000528907 DLC1Q96QB1 1528 aa20.59■□□□□ 0.89
UBXN1-209ENST00000528907 PTCH1Q13635 1447 aa20.59■□□□□ 0.89
UBXN1-209ENST00000528907 SIRT1Q96EB6 747 aa20.58■□□□□ 0.89
UBXN1-209ENST00000528907 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
UBXN1-209ENST00000528907 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
UBXN1-209ENST00000528907 NCOA3Q9Y6Q9 1424 aa20.56■□□□□ 0.88
UBXN1-209ENST00000528907 HSPA1LP34931 641 aa20.56■□□□□ 0.88
UBXN1-209ENST00000528907 TMEM132EQ6IEE7 984 aa20.56■□□□□ 0.88
UBXN1-209ENST00000528907 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
UBXN1-209ENST00000528907 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
UBXN1-209ENST00000528907 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
UBXN1-209ENST00000528907 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
UBXN1-209ENST00000528907 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
UBXN1-209ENST00000528907 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
UBXN1-209ENST00000528907 ROCK2O75116 1388 aaKnown RBP20.53■□□□□ 0.88
UBXN1-209ENST00000528907 TOM1O60784 492 aa20.51■□□□□ 0.87
UBXN1-209ENST00000528907 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
UBXN1-209ENST00000528907 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
UBXN1-209ENST00000528907 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-209ENST00000528907 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-209ENST00000528907 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
UBXN1-209ENST00000528907 CARD11Q9BXL7 1154 aa20.46■□□□□ 0.87
UBXN1-209ENST00000528907 STK26Q9P289 416 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms