RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 EID1Q9Y6B2 187 aa28.13■■■□□ 2.09
YIF1A-212ENST00000528575 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
YIF1A-212ENST00000528575 SLC52A1Q9NWF4 448 aa28.12■■■□□ 2.09
YIF1A-212ENST00000528575 NUP155O75694 1391 aa28.11■■■□□ 2.09
YIF1A-212ENST00000528575 SLC26A8Q96RN1 970 aa28.1■■■□□ 2.09
YIF1A-212ENST00000528575 STAG3Q9UJ98 1225 aa28.1■■■□□ 2.09
YIF1A-212ENST00000528575 NWD1Q149M9 1564 aa28.09■■■□□ 2.09
YIF1A-212ENST00000528575 SOCS7O14512 581 aa28.08■■■□□ 2.09
YIF1A-212ENST00000528575 TMEM94Q12767 1356 aa28.05■■■□□ 2.08
YIF1A-212ENST00000528575 KCNA6P17658 529 aa28.04■■■□□ 2.08
YIF1A-212ENST00000528575 RBM33Q96EV2 1170 aaKnown RBP28.04■■■□□ 2.08
YIF1A-212ENST00000528575 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
YIF1A-212ENST00000528575 SENP3Q9H4L4 574 aaPredicted RBP28.02■■■□□ 2.08
YIF1A-212ENST00000528575 PLEKHG1Q9ULL1 1385 aa28■■■□□ 2.07
YIF1A-212ENST00000528575 CHD2O14647 1828 aaKnown RBP27.98■■■□□ 2.07
YIF1A-212ENST00000528575 ADAMTS13Q76LX8 1427 aa27.98■■■□□ 2.07
YIF1A-212ENST00000528575 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
YIF1A-212ENST00000528575 NUTM2DQ5VT03 806 aaPredicted RBP27.93■■■□□ 2.06
YIF1A-212ENST00000528575 FAM135BQ49AJ0 1406 aa27.92■■■□□ 2.06
YIF1A-212ENST00000528575 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
YIF1A-212ENST00000528575 PROSER2Q86WR7 435 aaPredicted RBP27.9■■■□□ 2.06
YIF1A-212ENST00000528575 ROBO1Q9Y6N7 1651 aa27.9■■■□□ 2.06
YIF1A-212ENST00000528575 TRIM52Q96A61 297 aa27.89■■■□□ 2.06
YIF1A-212ENST00000528575 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.05
YIF1A-212ENST00000528575 SPHKAPQ2M3C7 1700 aa27.88■■■□□ 2.05
YIF1A-212ENST00000528575 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
YIF1A-212ENST00000528575 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
YIF1A-212ENST00000528575 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
YIF1A-212ENST00000528575 SLC4A1APQ9BWU0 796 aaKnown RBP27.84■■■□□ 2.05
YIF1A-212ENST00000528575 HRCP23327 699 aa27.83■■■□□ 2.05
YIF1A-212ENST00000528575 RGS17Q9UGC6 210 aaPredicted RBP27.83■■■□□ 2.05
YIF1A-212ENST00000528575 HDGFP51858 240 aaKnown RBP27.82■■■□□ 2.04
YIF1A-212ENST00000528575 BCANQ96GW7 911 aa27.82■■■□□ 2.04
YIF1A-212ENST00000528575 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
YIF1A-212ENST00000528575 CLTCL1P53675 1640 aa27.81■■■□□ 2.04
YIF1A-212ENST00000528575 PPP1R15AO75807 674 aaPredicted RBP27.81■■■□□ 2.04
YIF1A-212ENST00000528575 TRPM2O94759 1503 aa27.81■■■□□ 2.04
YIF1A-212ENST00000528575 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
YIF1A-212ENST00000528575 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.03
YIF1A-212ENST00000528575 SETBP1Q9Y6X0 1596 aa27.76■■■□□ 2.03
YIF1A-212ENST00000528575 MSH6P52701 1360 aa27.75■■■□□ 2.03
YIF1A-212ENST00000528575 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
YIF1A-212ENST00000528575 NEXMIFQ5QGS0 1516 aa27.74■■■□□ 2.03
YIF1A-212ENST00000528575 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.74■■■□□ 2.03
YIF1A-212ENST00000528575 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
YIF1A-212ENST00000528575 MPHOSPH9Q99550 1183 aa27.73■■■□□ 2.03
YIF1A-212ENST00000528575 SLAIN2Q9P270 581 aa27.73■■■□□ 2.03
YIF1A-212ENST00000528575 NCOA3Q9Y6Q9 1424 aa27.72■■■□□ 2.03
YIF1A-212ENST00000528575 METP08581 1390 aa27.7■■■□□ 2.02
YIF1A-212ENST00000528575 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.02
YIF1A-212ENST00000528575 PHLPP1O60346 1717 aa27.67■■■□□ 2.02
YIF1A-212ENST00000528575 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
YIF1A-212ENST00000528575 AMOTL2Q9Y2J4 779 aa27.67■■■□□ 2.02
YIF1A-212ENST00000528575 SETD1AO15047 1707 aaKnown RBP27.64■■■□□ 2.01
YIF1A-212ENST00000528575 CCDC144AA2RUR9 1427 aa27.61■■■□□ 2.01
YIF1A-212ENST00000528575 KIF1BO60333 1816 aa27.61■■■□□ 2.01
YIF1A-212ENST00000528575 C19orf44Q9H6X5 657 aa27.6■■■□□ 2.01
YIF1A-212ENST00000528575 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
YIF1A-212ENST00000528575 POTEAQ6S8J7 498 aa27.59■■■□□ 2.01
YIF1A-212ENST00000528575 ZNF326Q5BKZ1 582 aaKnown RBP27.58■■■□□ 2.01
YIF1A-212ENST00000528575 LRP6O75581 1613 aa27.58■■■□□ 2.01
YIF1A-212ENST00000528575 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
YIF1A-212ENST00000528575 NALCNQ8IZF0 1738 aa27.55■■■□□ 2
YIF1A-212ENST00000528575 MST1RQ04912 1400 aa27.54■■■□□ 2
YIF1A-212ENST00000528575 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
YIF1A-212ENST00000528575 JCADQ9P266 1359 aa27.54■■■□□ 2
YIF1A-212ENST00000528575 DCCP43146 1447 aa27.53■■■□□ 2
YIF1A-212ENST00000528575 FOXD1Q16676 465 aa27.53■■■□□ 2
YIF1A-212ENST00000528575 BRINP3Q76B58 766 aa27.53■■■□□ 2
YIF1A-212ENST00000528575 C14orf37Q86TY3 774 aa27.53■■■□□ 2
YIF1A-212ENST00000528575 PPLO60437 1756 aa27.51■■□□□ 1.99
YIF1A-212ENST00000528575 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
YIF1A-212ENST00000528575 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
YIF1A-212ENST00000528575 ATF3P18847 181 aa27.49■■□□□ 1.99
YIF1A-212ENST00000528575 ADGRL3Q9HAR2 1447 aa27.49■■□□□ 1.99
YIF1A-212ENST00000528575 SHPRHQ149N8 1683 aa27.48■■□□□ 1.99
YIF1A-212ENST00000528575 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-212ENST00000528575 NHSL1Q5SYE7 1610 aa27.47■■□□□ 1.99
YIF1A-212ENST00000528575 ROBO2Q9HCK4 1378 aa27.47■■□□□ 1.99
YIF1A-212ENST00000528575 SPATA31E1Q6ZUB1 1445 aa27.46■■□□□ 1.99
YIF1A-212ENST00000528575 PRAG1Q86YV5 1406 aa27.46■■□□□ 1.99
YIF1A-212ENST00000528575 ANKRD30BQ9BXX2 1392 aa27.45■■□□□ 1.98
YIF1A-212ENST00000528575 PTCH1Q13635 1447 aa27.43■■□□□ 1.98
YIF1A-212ENST00000528575 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
YIF1A-212ENST00000528575 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
YIF1A-212ENST00000528575 SPATA31A6Q5VVP1 1343 aa27.38■■□□□ 1.97
YIF1A-212ENST00000528575 ADGRF5Q8IZF2 1346 aa27.38■■□□□ 1.97
YIF1A-212ENST00000528575 C1orf167Q5SNV9 1468 aa27.36■■□□□ 1.97
YIF1A-212ENST00000528575 LAMC1P11047 1609 aa27.35■■□□□ 1.97
YIF1A-212ENST00000528575 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
YIF1A-212ENST00000528575 RGL3Q3MIN7 710 aa27.31■■□□□ 1.96
YIF1A-212ENST00000528575 MYOM2P54296 1465 aa27.29■■□□□ 1.96
YIF1A-212ENST00000528575 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
YIF1A-212ENST00000528575 ORAI2Q96SN7 254 aa27.28■■□□□ 1.96
YIF1A-212ENST00000528575 TECPR2O15040 1411 aa27.25■■□□□ 1.95
YIF1A-212ENST00000528575 PIK3C2GO75747 1445 aa27.25■■□□□ 1.95
YIF1A-212ENST00000528575 NRXN1Q9ULB1 1477 aa27.25■■□□□ 1.95
YIF1A-212ENST00000528575 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
YIF1A-212ENST00000528575 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
YIF1A-212ENST00000528575 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms