RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
SF3B2-206ENST00000528302 SEC24BO95487 1268 aa12.79□□□□□ -0.36
SF3B2-206ENST00000528302 IGHDP01880 384 aa12.79□□□□□ -0.36
SF3B2-206ENST00000528302 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-206ENST00000528302 USP35Q9P2H5 1018 aa12.79□□□□□ -0.36
SF3B2-206ENST00000528302 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
SF3B2-206ENST00000528302 SAMD9LQ8IVG5 1584 aa12.78□□□□□ -0.36
SF3B2-206ENST00000528302 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
SF3B2-206ENST00000528302 UBE2Q2Q8WVN8 375 aa12.78□□□□□ -0.36
SF3B2-206ENST00000528302 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
SF3B2-206ENST00000528302 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
SF3B2-206ENST00000528302 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.36
SF3B2-206ENST00000528302 ERBINQ96RT1 1412 aa12.77□□□□□ -0.36
SF3B2-206ENST00000528302 ADGRL2O95490 1459 aa12.77□□□□□ -0.36
SF3B2-206ENST00000528302 PRAG1Q86YV5 1406 aa12.77□□□□□ -0.37
SF3B2-206ENST00000528302 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-206ENST00000528302 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.37
SF3B2-206ENST00000528302 GZF1Q9H116 711 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-206ENST00000528302 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
SF3B2-206ENST00000528302 KIF3BO15066 747 aa12.76□□□□□ -0.37
SF3B2-206ENST00000528302 CROCC2H7BZ55 1655 aa12.76□□□□□ -0.37
SF3B2-206ENST00000528302 POGKQ9P215 609 aa12.75□□□□□ -0.37
SF3B2-206ENST00000528302 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-206ENST00000528302 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
SF3B2-206ENST00000528302 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
SF3B2-206ENST00000528302 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
SF3B2-206ENST00000528302 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-206ENST00000528302 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
SF3B2-206ENST00000528302 TRAPPC8Q9Y2L5 1435 aa12.74□□□□□ -0.37
SF3B2-206ENST00000528302 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
SF3B2-206ENST00000528302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
SF3B2-206ENST00000528302 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
SF3B2-206ENST00000528302 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
SF3B2-206ENST00000528302 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
SF3B2-206ENST00000528302 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
SF3B2-206ENST00000528302 A2MP01023 1474 aa12.72□□□□□ -0.37
SF3B2-206ENST00000528302 CFAP65Q6ZU64 1925 aaKnown RBP12.71□□□□□ -0.37
SF3B2-206ENST00000528302 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
SF3B2-206ENST00000528302 SAFB2Q14151 953 aaKnown RBP eCLIP12.71□□□□□ -0.38
SF3B2-206ENST00000528302 GGT6Q6P531 493 aa12.7□□□□□ -0.38
SF3B2-206ENST00000528302 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
SF3B2-206ENST00000528302 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
SF3B2-206ENST00000528302 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
SF3B2-206ENST00000528302 CENPJQ9HC77 1338 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-206ENST00000528302 COL17A1Q9UMD9 1497 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-206ENST00000528302 BLMP54132 1417 aaPredicted RBP12.68□□□□□ -0.38
SF3B2-206ENST00000528302 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
SF3B2-206ENST00000528302 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
SF3B2-206ENST00000528302 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
SF3B2-206ENST00000528302 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
SF3B2-206ENST00000528302 PDE4CQ08493 712 aa12.66□□□□□ -0.38
SF3B2-206ENST00000528302 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
SF3B2-206ENST00000528302 RLBP1P12271 317 aa12.66□□□□□ -0.38
SF3B2-206ENST00000528302 KDM5DQ9BY66 1539 aa12.66□□□□□ -0.38
SF3B2-206ENST00000528302 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-206ENST00000528302 CARD14Q9BXL6 1004 aa12.66□□□□□ -0.38
SF3B2-206ENST00000528302 TMEM132EQ6IEE7 984 aa12.65□□□□□ -0.38
SF3B2-206ENST00000528302 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
SF3B2-206ENST00000528302 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 E9PSI1 815 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
SF3B2-206ENST00000528302 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
SF3B2-206ENST00000528302 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
SF3B2-206ENST00000528302 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
SF3B2-206ENST00000528302 TSR2Q969E8 191 aaKnown RBP12.62□□□□□ -0.39
SF3B2-206ENST00000528302 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
SF3B2-206ENST00000528302 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
SF3B2-206ENST00000528302 TCP11L2Q8N4U5 519 aa12.62□□□□□ -0.39
SF3B2-206ENST00000528302 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
SF3B2-206ENST00000528302 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
SF3B2-206ENST00000528302 BECN1Q14457 450 aa12.61□□□□□ -0.39
SF3B2-206ENST00000528302 USP19O94966 1318 aa12.61□□□□□ -0.39
SF3B2-206ENST00000528302 PLCH2O75038 1416 aa12.61□□□□□ -0.39
SF3B2-206ENST00000528302 ARHGEF5Q12774 1597 aa12.61□□□□□ -0.39
SF3B2-206ENST00000528302 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SF3B2-206ENST00000528302 ADGRF5Q8IZF2 1346 aa12.61□□□□□ -0.39
SF3B2-206ENST00000528302 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
SF3B2-206ENST00000528302 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-206ENST00000528302 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.398e-8■□□□□ 11.2
SF3B2-206ENST00000528302 ZCCHC11Q5TAX3 1644 aaKnown RBP12.6□□□□□ -0.39
SF3B2-206ENST00000528302 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
SF3B2-206ENST00000528302 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
SF3B2-206ENST00000528302 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 MTHFSP49914 203 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
SF3B2-206ENST00000528302 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
SF3B2-206ENST00000528302 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
SF3B2-206ENST00000528302 E9PCH4 1651 aa12.58□□□□□ -0.4
SF3B2-206ENST00000528302 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
SF3B2-206ENST00000528302 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
SF3B2-206ENST00000528302 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
SF3B2-206ENST00000528302 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
SF3B2-206ENST00000528302 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
SF3B2-206ENST00000528302 STK26Q9P289 416 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms