RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 TMEM131LA2VDJ0 1609 aa39.68■■■■□ 3.94
TRIM3-206ENST00000528227 PPARGC1BQ86YN6 1023 aaKnown RBP39.67■■■■□ 3.94
TRIM3-206ENST00000528227 ITGAEP38570 1179 aa39.64■■■■□ 3.94
TRIM3-206ENST00000528227 TMEM94Q12767 1356 aa39.63■■■■□ 3.93
TRIM3-206ENST00000528227 NWD1Q149M9 1564 aa39.63■■■■□ 3.93
TRIM3-206ENST00000528227 RIMS2Q9UQ26 1411 aa39.61■■■■□ 3.93
TRIM3-206ENST00000528227 PLEKHG1Q9ULL1 1385 aa39.59■■■■□ 3.93
TRIM3-206ENST00000528227 BCANQ96GW7 911 aa39.59■■■■□ 3.93
TRIM3-206ENST00000528227 SENP3Q9H4L4 574 aaPredicted RBP39.59■■■■□ 3.93
TRIM3-206ENST00000528227 NKTRP30414 1462 aaKnown RBP39.58■■■■□ 3.93
TRIM3-206ENST00000528227 NUP155O75694 1391 aa39.58■■■■□ 3.93
TRIM3-206ENST00000528227 HDGFP51858 240 aaKnown RBP39.56■■■■□ 3.92
TRIM3-206ENST00000528227 PROSER2Q86WR7 435 aaPredicted RBP39.55■■■■□ 3.92
TRIM3-206ENST00000528227 PPP1R15AO75807 674 aaPredicted RBP39.53■■■■□ 3.92
TRIM3-206ENST00000528227 CHGAP10645 457 aaKnown RBP39.51■■■■□ 3.92
TRIM3-206ENST00000528227 RBM33Q96EV2 1170 aaKnown RBP39.5■■■■□ 3.91
TRIM3-206ENST00000528227 FAM135BQ49AJ0 1406 aa39.49■■■■□ 3.91
TRIM3-206ENST00000528227 CHD2O14647 1828 aaKnown RBP39.49■■■■□ 3.91
TRIM3-206ENST00000528227 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.48■■■■□ 3.91
TRIM3-206ENST00000528227 RRBP1Q9P2E9 1410 aaKnown RBP39.43■■■■□ 3.9
TRIM3-206ENST00000528227 TBX22Q9Y458 520 aa39.43■■■■□ 3.9
TRIM3-206ENST00000528227 NUTM2DQ5VT03 806 aaPredicted RBP39.4■■■■□ 3.9
TRIM3-206ENST00000528227 PHF23Q9BUL5 403 aaPredicted RBP39.4■■■■□ 3.9
TRIM3-206ENST00000528227 ROBO1Q9Y6N7 1651 aa39.4■■■■□ 3.9
TRIM3-206ENST00000528227 ADAMTS13Q76LX8 1427 aa39.4■■■■□ 3.9
TRIM3-206ENST00000528227 DIP2AQ14689 1571 aa39.38■■■■□ 3.9
TRIM3-206ENST00000528227 MSH6P52701 1360 aa39.38■■■■□ 3.89
TRIM3-206ENST00000528227 SPHKAPQ2M3C7 1700 aa39.37■■■■□ 3.89
TRIM3-206ENST00000528227 PIK3R4Q99570 1358 aa39.3■■■■□ 3.88
TRIM3-206ENST00000528227 NAIPQ13075 1403 aa39.28■■■■□ 3.88
TRIM3-206ENST00000528227 NCOA3Q9Y6Q9 1424 aa39.28■■■■□ 3.88
TRIM3-206ENST00000528227 SLAIN2Q9P270 581 aa39.26■■■■□ 3.88
TRIM3-206ENST00000528227 TRPM2O94759 1503 aa39.25■■■■□ 3.87
TRIM3-206ENST00000528227 NRXN3Q9Y4C0 1643 aa39.21■■■■□ 3.87
TRIM3-206ENST00000528227 SETBP1Q9Y6X0 1596 aa39.19■■■■□ 3.86
TRIM3-206ENST00000528227 CLTCL1P53675 1640 aa39.18■■■■□ 3.86
TRIM3-206ENST00000528227 PTPRUQ92729 1446 aa39.18■■■■□ 3.86
TRIM3-206ENST00000528227 C14orf37Q86TY3 774 aa39.16■■■■□ 3.86
TRIM3-206ENST00000528227 PHLPP1O60346 1717 aa39.16■■■■□ 3.86
TRIM3-206ENST00000528227 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.15■■■■□ 3.86
TRIM3-206ENST00000528227 ZNF326Q5BKZ1 582 aaKnown RBP39.15■■■■□ 3.86
TRIM3-206ENST00000528227 AMOTL2Q9Y2J4 779 aa39.15■■■■□ 3.86
TRIM3-206ENST00000528227 RGS17Q9UGC6 210 aaPredicted RBP39.14■■■■□ 3.86
TRIM3-206ENST00000528227 HFM1A2PYH4 1435 aa39.13■■■■□ 3.85
TRIM3-206ENST00000528227 C19orf44Q9H6X5 657 aa39.12■■■■□ 3.85
TRIM3-206ENST00000528227 XRN1Q8IZH2 1706 aaKnown RBP39.1■■■■□ 3.85
TRIM3-206ENST00000528227 NEXMIFQ5QGS0 1516 aa39.09■■■■□ 3.85
TRIM3-206ENST00000528227 CADPS2Q86UW7 1296 aa39.08■■■■□ 3.85
TRIM3-206ENST00000528227 KIF1BO60333 1816 aa39.07■■■■□ 3.84
TRIM3-206ENST00000528227 COL16A1Q07092 1604 aaPredicted RBP39.05■■■■□ 3.84
TRIM3-206ENST00000528227 ATF3P18847 181 aa39.05■■■■□ 3.84
TRIM3-206ENST00000528227 TRIM52Q96A61 297 aa39.03■■■■□ 3.84
TRIM3-206ENST00000528227 METP08581 1390 aa39.03■■■■□ 3.84
TRIM3-206ENST00000528227 JCADQ9P266 1359 aa39.03■■■■□ 3.84
TRIM3-206ENST00000528227 DCCP43146 1447 aa38.98■■■■□ 3.83
TRIM3-206ENST00000528227 AHDC1Q5TGY3 1603 aaPredicted RBP38.98■■■■□ 3.83
TRIM3-206ENST00000528227 SLC4A1APQ9BWU0 796 aaKnown RBP38.94■■■■□ 3.82
TRIM3-206ENST00000528227 POTEAQ6S8J7 498 aa38.9■■■■□ 3.82
TRIM3-206ENST00000528227 BRINP3Q76B58 766 aa38.89■■■■□ 3.82
TRIM3-206ENST00000528227 MST1RQ04912 1400 aa38.86■■■■□ 3.81
TRIM3-206ENST00000528227 SETD1AO15047 1707 aaKnown RBP38.86■■■■□ 3.81
TRIM3-206ENST00000528227 VGFO15240 615 aaPredicted RBP38.85■■■■□ 3.81
TRIM3-206ENST00000528227 ADGRL3Q9HAR2 1447 aa38.85■■■■□ 3.81
TRIM3-206ENST00000528227 SHPRHQ149N8 1683 aa38.84■■■■□ 3.81
TRIM3-206ENST00000528227 SPATA31A6Q5VVP1 1343 aa38.84■■■■□ 3.81
TRIM3-206ENST00000528227 ASXL1Q8IXJ9 1541 aa38.84■■■■□ 3.81
TRIM3-206ENST00000528227 RPGRIP1LQ68CZ1 1315 aa38.83■■■■□ 3.81
TRIM3-206ENST00000528227 NALCNQ8IZF0 1738 aa38.83■■■■□ 3.81
TRIM3-206ENST00000528227 LRP6O75581 1613 aa38.81■■■■□ 3.8
TRIM3-206ENST00000528227 PPLO60437 1756 aa38.81■■■■□ 3.8
TRIM3-206ENST00000528227 FOXD1Q16676 465 aa38.77■■■■□ 3.8
TRIM3-206ENST00000528227 PTCH1Q13635 1447 aa38.77■■■■□ 3.8
TRIM3-206ENST00000528227 NHSL1Q5SYE7 1610 aa38.76■■■■□ 3.8
TRIM3-206ENST00000528227 PRAG1Q86YV5 1406 aa38.72■■■■□ 3.79
TRIM3-206ENST00000528227 ROBO2Q9HCK4 1378 aa38.71■■■■□ 3.79
TRIM3-206ENST00000528227 SETD5Q9C0A6 1442 aa38.7■■■■□ 3.79
TRIM3-206ENST00000528227 CCDC144AA2RUR9 1427 aa38.69■■■■□ 3.78
TRIM3-206ENST00000528227 MEX3CQ5U5Q3 659 aaKnown RBP38.68■■■■□ 3.78
TRIM3-206ENST00000528227 MPHOSPH9Q99550 1183 aa38.66■■■■□ 3.78
TRIM3-206ENST00000528227 C1orf167Q5SNV9 1468 aa38.63■■■■□ 3.77
TRIM3-206ENST00000528227 SPATA31E1Q6ZUB1 1445 aa38.63■■■■□ 3.77
TRIM3-206ENST00000528227 DDX17Q92841 729 aaKnown RBP38.6■■■■□ 3.77
TRIM3-206ENST00000528227 LRRC59Q96AG4 307 aaKnown RBP38.6■■■■□ 3.77
TRIM3-206ENST00000528227 ZNF772Q68DY9 489 aaPredicted RBP38.59■■■■□ 3.77
TRIM3-206ENST00000528227 IFT172Q9UG01 1749 aa38.59■■■■□ 3.77
TRIM3-206ENST00000528227 ADGRF5Q8IZF2 1346 aa38.59■■■■□ 3.77
TRIM3-206ENST00000528227 NUTM2BA6NNL0 878 aaPredicted RBP38.58■■■■□ 3.77
TRIM3-206ENST00000528227 NUTM2EB1AL46 878 aaPredicted RBP38.58■■■■□ 3.77
TRIM3-206ENST00000528227 NUTM2AQ8IVF1 878 aaPredicted RBP38.58■■■■□ 3.77
TRIM3-206ENST00000528227 RGL3Q3MIN7 710 aa38.56■■■■□ 3.76
TRIM3-206ENST00000528227 LAMC1P11047 1609 aa38.56■■■■□ 3.76
TRIM3-206ENST00000528227 ANKRD30BQ9BXX2 1392 aa38.54■■■■□ 3.76
TRIM3-206ENST00000528227 PNPLA6Q8IY17 1366 aa38.52■■■■□ 3.76
TRIM3-206ENST00000528227 ACIN1Q9UKV3 1341 aaKnown RBP38.5■■■■□ 3.75
TRIM3-206ENST00000528227 ORAI2Q96SN7 254 aa38.5■■■■□ 3.75
TRIM3-206ENST00000528227 CDC42BPGQ6DT37 1551 aa38.47■■■■□ 3.75
TRIM3-206ENST00000528227 TECPR2O15040 1411 aa38.46■■■■□ 3.75
TRIM3-206ENST00000528227 PIK3C2GO75747 1445 aa38.46■■■■□ 3.75
TRIM3-206ENST00000528227 SOS2Q07890 1332 aaPredicted RBP38.44■■■■□ 3.74
TRIM3-206ENST00000528227 LRPPRCP42704 1394 aaKnown RBP38.43■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms