RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TRPM2O94759 1503 aa39.37■■■■□ 3.89
TSPAN4-217ENST00000527644 ACIN1Q9UKV3 1341 aaKnown RBP39.37■■■■□ 3.89
TSPAN4-217ENST00000527644 STRCP1A6NGW2 1772 aa39.36■■■■□ 3.89
TSPAN4-217ENST00000527644 PLEKHG1Q9ULL1 1385 aa39.36■■■■□ 3.89
TSPAN4-217ENST00000527644 BCANQ96GW7 911 aa39.36■■■■□ 3.89
TSPAN4-217ENST00000527644 SLC26A8Q96RN1 970 aa39.36■■■■□ 3.89
TSPAN4-217ENST00000527644 SETD5Q9C0A6 1442 aa39.34■■■■□ 3.89
TSPAN4-217ENST00000527644 UBAP1LF5GYI3 381 aa39.34■■■■□ 3.89
TSPAN4-217ENST00000527644 LRRC7Q96NW7 1537 aa39.3■■■■□ 3.88
TSPAN4-217ENST00000527644 CLTCL1P53675 1640 aa39.29■■■■□ 3.88
TSPAN4-217ENST00000527644 KCNA6P17658 529 aa39.27■■■■□ 3.88
TSPAN4-217ENST00000527644 NUTM2DQ5VT03 806 aaPredicted RBP39.27■■■■□ 3.88
TSPAN4-217ENST00000527644 MPHOSPH9Q99550 1183 aa39.26■■■■□ 3.88
TSPAN4-217ENST00000527644 ZNF326Q5BKZ1 582 aaKnown RBP39.25■■■■□ 3.87
TSPAN4-217ENST00000527644 SENP3Q9H4L4 574 aaPredicted RBP39.23■■■■□ 3.87
TSPAN4-217ENST00000527644 TOM1O60784 492 aa39.22■■■■□ 3.87
TSPAN4-217ENST00000527644 TBX22Q9Y458 520 aa39.22■■■■□ 3.87
TSPAN4-217ENST00000527644 FOXD1Q16676 465 aa39.2■■■■□ 3.87
TSPAN4-217ENST00000527644 KIF1BO60333 1816 aa39.19■■■■□ 3.86
TSPAN4-217ENST00000527644 RAB3GAP2Q9H2M9 1393 aa39.19■■■■□ 3.86
TSPAN4-217ENST00000527644 ADAMTS13Q76LX8 1427 aa39.15■■■■□ 3.86
TSPAN4-217ENST00000527644 DIP2AQ14689 1571 aa39.12■■■■□ 3.85
TSPAN4-217ENST00000527644 NWD1Q149M9 1564 aa39.12■■■■□ 3.85
TSPAN4-217ENST00000527644 PROSER2Q86WR7 435 aaPredicted RBP39.1■■■■□ 3.85
TSPAN4-217ENST00000527644 NKTRP30414 1462 aaKnown RBP39.1■■■■□ 3.85
TSPAN4-217ENST00000527644 NEXMIFQ5QGS0 1516 aa39.09■■■■□ 3.85
TSPAN4-217ENST00000527644 PIK3R4Q99570 1358 aa39.08■■■■□ 3.85
TSPAN4-217ENST00000527644 CHD2O14647 1828 aaKnown RBP39.07■■■■□ 3.85
TSPAN4-217ENST00000527644 TMEM94Q12767 1356 aa39.07■■■■□ 3.84
TSPAN4-217ENST00000527644 CCDC144AA2RUR9 1427 aa39.06■■■■□ 3.84
TSPAN4-217ENST00000527644 PIP4K2BP78356 416 aa39.06■■■■□ 3.84
TSPAN4-217ENST00000527644 XIRP1Q702N8 1843 aaKnown RBP39.05■■■■□ 3.84
TSPAN4-217ENST00000527644 HRCP23327 699 aa39.05■■■■□ 3.84
TSPAN4-217ENST00000527644 RPGRIP1LQ68CZ1 1315 aa39.05■■■■□ 3.84
TSPAN4-217ENST00000527644 SCAF1Q9H7N4 1312 aaKnown RBP39.05■■■■□ 3.84
TSPAN4-217ENST00000527644 SETBP1Q9Y6X0 1596 aa39.04■■■■□ 3.84
TSPAN4-217ENST00000527644 ALKQ9UM73 1620 aa39.03■■■■□ 3.84
TSPAN4-217ENST00000527644 VGFO15240 615 aaPredicted RBP39.01■■■■□ 3.84
TSPAN4-217ENST00000527644 NRXN3Q9Y4C0 1643 aa39■■■■□ 3.83
TSPAN4-217ENST00000527644 RBM33Q96EV2 1170 aaKnown RBP38.96■■■■□ 3.83
TSPAN4-217ENST00000527644 AMOTL2Q9Y2J4 779 aa38.93■■■■□ 3.82
TSPAN4-217ENST00000527644 SPATA31E1Q6ZUB1 1445 aa38.91■■■■□ 3.82
TSPAN4-217ENST00000527644 PTPRUQ92729 1446 aa38.9■■■■□ 3.82
TSPAN4-217ENST00000527644 NCOA3Q9Y6Q9 1424 aa38.89■■■■□ 3.82
TSPAN4-217ENST00000527644 PPLO60437 1756 aa38.89■■■■□ 3.82
TSPAN4-217ENST00000527644 RGL3Q3MIN7 710 aa38.88■■■■□ 3.81
TSPAN4-217ENST00000527644 METP08581 1390 aa38.87■■■■□ 3.81
TSPAN4-217ENST00000527644 MSH6P52701 1360 aa38.87■■■■□ 3.81
TSPAN4-217ENST00000527644 HSPA1LP34931 641 aa38.86■■■■□ 3.81
TSPAN4-217ENST00000527644 ANKRD30BQ9BXX2 1392 aa38.81■■■■□ 3.8
TSPAN4-217ENST00000527644 XRN1Q8IZH2 1706 aaKnown RBP38.8■■■■□ 3.8
TSPAN4-217ENST00000527644 C14orf37Q86TY3 774 aa38.78■■■■□ 3.8
TSPAN4-217ENST00000527644 FAM135BQ49AJ0 1406 aa38.76■■■■□ 3.8
TSPAN4-217ENST00000527644 ADGRF5Q8IZF2 1346 aa38.75■■■■□ 3.79
TSPAN4-217ENST00000527644 C19orf44Q9H6X5 657 aa38.74■■■■□ 3.79
TSPAN4-217ENST00000527644 IFT172Q9UG01 1749 aa38.73■■■■□ 3.79
TSPAN4-217ENST00000527644 SETD1AO15047 1707 aaKnown RBP38.72■■■■□ 3.79
TSPAN4-217ENST00000527644 SLAIN2Q9P270 581 aa38.71■■■■□ 3.79
TSPAN4-217ENST00000527644 CADPS2Q86UW7 1296 aa38.68■■■■□ 3.78
TSPAN4-217ENST00000527644 ATF3P18847 181 aa38.66■■■■□ 3.78
TSPAN4-217ENST00000527644 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.65■■■■□ 3.78
TSPAN4-217ENST00000527644 PIK3C2GO75747 1445 aa38.62■■■■□ 3.77
TSPAN4-217ENST00000527644 ROBO1Q9Y6N7 1651 aa38.62■■■■□ 3.77
TSPAN4-217ENST00000527644 PTCH1Q13635 1447 aa38.61■■■■□ 3.77
TSPAN4-217ENST00000527644 PRAG1Q86YV5 1406 aa38.6■■■■□ 3.77
TSPAN4-217ENST00000527644 DCCP43146 1447 aa38.59■■■■□ 3.77
TSPAN4-217ENST00000527644 MYOM2P54296 1465 aa38.58■■■■□ 3.77
TSPAN4-217ENST00000527644 ROBO2Q9HCK4 1378 aa38.56■■■■□ 3.76
TSPAN4-217ENST00000527644 DISP3Q9P2K9 1392 aa38.56■■■■□ 3.76
TSPAN4-217ENST00000527644 NRXN1Q9ULB1 1477 aa38.55■■■■□ 3.76
TSPAN4-217ENST00000527644 ADGRL3Q9HAR2 1447 aa38.55■■■■□ 3.76
TSPAN4-217ENST00000527644 C14orf93Q9H972 538 aaKnown RBP38.52■■■■□ 3.76
TSPAN4-217ENST00000527644 LRPPRCP42704 1394 aaKnown RBP38.48■■■■□ 3.75
TSPAN4-217ENST00000527644 TMEM132EQ6IEE7 984 aa38.48■■■■□ 3.75
TSPAN4-217ENST00000527644 STAC3Q96MF2 364 aa38.48■■■■□ 3.75
TSPAN4-217ENST00000527644 NALCNQ8IZF0 1738 aa38.46■■■■□ 3.75
TSPAN4-217ENST00000527644 ABCC11Q96J66 1382 aa38.45■■■■□ 3.75
TSPAN4-217ENST00000527644 ASXL1Q8IXJ9 1541 aa38.45■■■■□ 3.75
TSPAN4-217ENST00000527644 DCAF11Q8TEB1 546 aa38.45■■■■□ 3.75
TSPAN4-217ENST00000527644 STK26Q9P289 416 aa38.45■■■■□ 3.75
TSPAN4-217ENST00000527644 TECPR2O15040 1411 aa38.45■■■■□ 3.75
TSPAN4-217ENST00000527644 CFAP70Q5T0N1 1121 aa38.44■■■■□ 3.74
TSPAN4-217ENST00000527644 MST1RQ04912 1400 aa38.43■■■■□ 3.74
TSPAN4-217ENST00000527644 LAMC1P11047 1609 aa38.42■■■■□ 3.74
TSPAN4-217ENST00000527644 KDM2AQ9Y2K7 1162 aa38.42■■■■□ 3.74
TSPAN4-217ENST00000527644 YTHDC2Q9H6S0 1430 aaKnown RBP38.41■■■■□ 3.74
TSPAN4-217ENST00000527644 BRINP3Q76B58 766 aa38.39■■■■□ 3.74
TSPAN4-217ENST00000527644 TRIM26Q12899 539 aaPredicted RBP38.38■■■■□ 3.73
TSPAN4-217ENST00000527644 DHX57Q6P158 1386 aaKnown RBP38.38■■■■□ 3.73
TSPAN4-217ENST00000527644 MED1Q15648 1581 aaPredicted RBP38.38■■■■□ 3.73
TSPAN4-217ENST00000527644 PHLPP1O60346 1717 aa38.38■■■■□ 3.73
TSPAN4-217ENST00000527644 KNDC1Q76NI1 1749 aa38.37■■■■□ 3.73
TSPAN4-217ENST00000527644 SIRT1Q96EB6 747 aa38.35■■■■□ 3.73
TSPAN4-217ENST00000527644 WAPLQ7Z5K2 1190 aa38.34■■■■□ 3.73
TSPAN4-217ENST00000527644 AHDC1Q5TGY3 1603 aaPredicted RBP38.33■■■■□ 3.73
TSPAN4-217ENST00000527644 C1orf167Q5SNV9 1468 aa38.29■■■■□ 3.72
TSPAN4-217ENST00000527644 COL16A1Q07092 1604 aaPredicted RBP38.28■■■■□ 3.72
TSPAN4-217ENST00000527644 ILDR2Q71H61 639 aa38.27■■■■□ 3.72
TSPAN4-217ENST00000527644 PLEKHH1Q9ULM0 1364 aa38.27■■■■□ 3.72
TSPAN4-217ENST00000527644 JCADQ9P266 1359 aa38.26■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms