RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 MPHOSPH9Q99550 1183 aa19.82■□□□□ 0.76
CAPN1-209ENST00000527469 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
CAPN1-209ENST00000527469 ILDR1Q86SU0 546 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-209ENST00000527469 FOXD1Q16676 465 aa19.8■□□□□ 0.76
CAPN1-209ENST00000527469 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-209ENST00000527469 MYO5BQ9ULV0 1848 aa19.8■□□□□ 0.76
CAPN1-209ENST00000527469 ZFYVE9O95405 1425 aa19.77■□□□□ 0.76
CAPN1-209ENST00000527469 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-209ENST00000527469 CPS1P31327 1500 aa19.76■□□□□ 0.75
CAPN1-209ENST00000527469 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
CAPN1-209ENST00000527469 SLC26A8Q96RN1 970 aa19.76■□□□□ 0.75
CAPN1-209ENST00000527469 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
CAPN1-209ENST00000527469 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
CAPN1-209ENST00000527469 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
CAPN1-209ENST00000527469 KIF1BO60333 1816 aa19.74■□□□□ 0.75
CAPN1-209ENST00000527469 HRCP23327 699 aa19.72■□□□□ 0.75
CAPN1-209ENST00000527469 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
CAPN1-209ENST00000527469 KCNA6P17658 529 aa19.66■□□□□ 0.74
CAPN1-209ENST00000527469 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
CAPN1-209ENST00000527469 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
CAPN1-209ENST00000527469 VGFO15240 615 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-209ENST00000527469 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
CAPN1-209ENST00000527469 DIP2AQ14689 1571 aa19.64■□□□□ 0.73
CAPN1-209ENST00000527469 STRCP1A6NGW2 1772 aa19.63■□□□□ 0.73
CAPN1-209ENST00000527469 NEXMIFQ5QGS0 1516 aa19.63■□□□□ 0.73
CAPN1-209ENST00000527469 LRRC7Q96NW7 1537 aa19.63■□□□□ 0.73
CAPN1-209ENST00000527469 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
CAPN1-209ENST00000527469 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-209ENST00000527469 TOM1O60784 492 aa19.62■□□□□ 0.73
CAPN1-209ENST00000527469 ADAMTS13Q76LX8 1427 aa19.6■□□□□ 0.73
CAPN1-209ENST00000527469 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
CAPN1-209ENST00000527469 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
CAPN1-209ENST00000527469 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
CAPN1-209ENST00000527469 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.73
CAPN1-209ENST00000527469 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
CAPN1-209ENST00000527469 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
CAPN1-209ENST00000527469 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
CAPN1-209ENST00000527469 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
CAPN1-209ENST00000527469 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
CAPN1-209ENST00000527469 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
CAPN1-209ENST00000527469 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
CAPN1-209ENST00000527469 CHD2O14647 1828 aaKnown RBP19.55■□□□□ 0.72
CAPN1-209ENST00000527469 PPLO60437 1756 aa19.55■□□□□ 0.72
CAPN1-209ENST00000527469 RBM33Q96EV2 1170 aaKnown RBP19.54■□□□□ 0.72
CAPN1-209ENST00000527469 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
CAPN1-209ENST00000527469 MSH6P52701 1360 aa19.52■□□□□ 0.72
CAPN1-209ENST00000527469 METP08581 1390 aa19.51■□□□□ 0.71
CAPN1-209ENST00000527469 ADGRF5Q8IZF2 1346 aa19.5■□□□□ 0.71
CAPN1-209ENST00000527469 PTPRUQ92729 1446 aa19.48■□□□□ 0.71
CAPN1-209ENST00000527469 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
CAPN1-209ENST00000527469 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
CAPN1-209ENST00000527469 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
CAPN1-209ENST00000527469 NCOA3Q9Y6Q9 1424 aa19.45■□□□□ 0.7
CAPN1-209ENST00000527469 ATF3P18847 181 aa19.44■□□□□ 0.7
CAPN1-209ENST00000527469 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
CAPN1-209ENST00000527469 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
CAPN1-209ENST00000527469 XRN1Q8IZH2 1706 aaKnown RBP19.44■□□□□ 0.7
CAPN1-209ENST00000527469 MYOM2P54296 1465 aa19.43■□□□□ 0.7
CAPN1-209ENST00000527469 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
CAPN1-209ENST00000527469 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
CAPN1-209ENST00000527469 CADPS2Q86UW7 1296 aa19.41■□□□□ 0.7
CAPN1-209ENST00000527469 STK26Q9P289 416 aa19.41■□□□□ 0.7
CAPN1-209ENST00000527469 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
CAPN1-209ENST00000527469 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.7
CAPN1-209ENST00000527469 HSPA1LP34931 641 aa19.39■□□□□ 0.69
CAPN1-209ENST00000527469 SLAIN2Q9P270 581 aa19.39■□□□□ 0.69
CAPN1-209ENST00000527469 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
CAPN1-209ENST00000527469 TMEM132EQ6IEE7 984 aa19.38■□□□□ 0.69
CAPN1-209ENST00000527469 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
CAPN1-209ENST00000527469 CFAP70Q5T0N1 1121 aa19.37■□□□□ 0.69
CAPN1-209ENST00000527469 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
CAPN1-209ENST00000527469 ROBO2Q9HCK4 1378 aa19.36■□□□□ 0.69
CAPN1-209ENST00000527469 LAMC1P11047 1609 aa19.36■□□□□ 0.69
CAPN1-209ENST00000527469 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
CAPN1-209ENST00000527469 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
CAPN1-209ENST00000527469 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
CAPN1-209ENST00000527469 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
CAPN1-209ENST00000527469 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
CAPN1-209ENST00000527469 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-209ENST00000527469 DCCP43146 1447 aa19.34■□□□□ 0.69
CAPN1-209ENST00000527469 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
CAPN1-209ENST00000527469 PRAG1Q86YV5 1406 aa19.32■□□□□ 0.68
CAPN1-209ENST00000527469 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
CAPN1-209ENST00000527469 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
CAPN1-209ENST00000527469 ABCC11Q96J66 1382 aa19.31■□□□□ 0.68
CAPN1-209ENST00000527469 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
CAPN1-209ENST00000527469 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
CAPN1-209ENST00000527469 TECPR2O15040 1411 aa19.29■□□□□ 0.68
CAPN1-209ENST00000527469 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
CAPN1-209ENST00000527469 NALCNQ8IZF0 1738 aa19.28■□□□□ 0.68
CAPN1-209ENST00000527469 POGKQ9P215 609 aa19.27■□□□□ 0.68
CAPN1-209ENST00000527469 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
CAPN1-209ENST00000527469 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
CAPN1-209ENST00000527469 SIRT1Q96EB6 747 aa19.24■□□□□ 0.67
CAPN1-209ENST00000527469 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
CAPN1-209ENST00000527469 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
CAPN1-209ENST00000527469 MST1RQ04912 1400 aa19.24■□□□□ 0.67
CAPN1-209ENST00000527469 PLEKHH1Q9ULM0 1364 aa19.23■□□□□ 0.67
CAPN1-209ENST00000527469 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.67
CAPN1-209ENST00000527469 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms