RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-218ENST00000527118 SPHKAPQ2M3C7 1700 aa23.72■■□□□ 1.39
RBBP4-218ENST00000527118 ZFYVE9O95405 1425 aa23.71■■□□□ 1.39
RBBP4-218ENST00000527118 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
RBBP4-218ENST00000527118 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
RBBP4-218ENST00000527118 BCANQ96GW7 911 aa23.69■■□□□ 1.38
RBBP4-218ENST00000527118 NAIPQ13075 1403 aa23.67■■□□□ 1.38
RBBP4-218ENST00000527118 HSPA1LP34931 641 aa23.67■■□□□ 1.38
RBBP4-218ENST00000527118 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
RBBP4-218ENST00000527118 NWD1Q149M9 1564 aa23.64■■□□□ 1.37
RBBP4-218ENST00000527118 PLEKHG1Q9ULL1 1385 aa23.64■■□□□ 1.37
RBBP4-218ENST00000527118 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
RBBP4-218ENST00000527118 KCNA6P17658 529 aa23.63■■□□□ 1.37
RBBP4-218ENST00000527118 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
RBBP4-218ENST00000527118 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
RBBP4-218ENST00000527118 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
RBBP4-218ENST00000527118 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
RBBP4-218ENST00000527118 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.59■■□□□ 1.37
RBBP4-218ENST00000527118 TMEM94Q12767 1356 aa23.59■■□□□ 1.37
RBBP4-218ENST00000527118 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
RBBP4-218ENST00000527118 PROSER2Q86WR7 435 aaPredicted RBP23.58■■□□□ 1.37
RBBP4-218ENST00000527118 CLTCL1P53675 1640 aa23.58■■□□□ 1.36
RBBP4-218ENST00000527118 KIF1BO60333 1816 aa23.56■■□□□ 1.36
RBBP4-218ENST00000527118 ILDR2Q71H61 639 aa23.55■■□□□ 1.36
RBBP4-218ENST00000527118 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
RBBP4-218ENST00000527118 TRPM2O94759 1503 aa23.54■■□□□ 1.36
RBBP4-218ENST00000527118 ADAMTS13Q76LX8 1427 aa23.54■■□□□ 1.36
RBBP4-218ENST00000527118 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
RBBP4-218ENST00000527118 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
RBBP4-218ENST00000527118 MED1Q15648 1581 aaPredicted RBP23.51■■□□□ 1.35
RBBP4-218ENST00000527118 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
RBBP4-218ENST00000527118 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
RBBP4-218ENST00000527118 ROBO1Q9Y6N7 1651 aa23.48■■□□□ 1.35
RBBP4-218ENST00000527118 MSH6P52701 1360 aa23.46■■□□□ 1.35
RBBP4-218ENST00000527118 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
RBBP4-218ENST00000527118 SLC4A1APQ9BWU0 796 aaKnown RBP23.46■■□□□ 1.35
RBBP4-218ENST00000527118 SETBP1Q9Y6X0 1596 aa23.45■■□□□ 1.34
RBBP4-218ENST00000527118 FAM135BQ49AJ0 1406 aa23.43■■□□□ 1.34
RBBP4-218ENST00000527118 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
RBBP4-218ENST00000527118 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
RBBP4-218ENST00000527118 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.41■■□□□ 1.34
RBBP4-218ENST00000527118 XRN1Q8IZH2 1706 aaKnown RBP23.4■■□□□ 1.34
RBBP4-218ENST00000527118 FOXD1Q16676 465 aa23.39■■□□□ 1.33
RBBP4-218ENST00000527118 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
RBBP4-218ENST00000527118 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
RBBP4-218ENST00000527118 PPLO60437 1756 aa23.37■■□□□ 1.33
RBBP4-218ENST00000527118 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
RBBP4-218ENST00000527118 SLAIN2Q9P270 581 aa23.36■■□□□ 1.33
RBBP4-218ENST00000527118 METP08581 1390 aa23.36■■□□□ 1.33
RBBP4-218ENST00000527118 PHLPP1O60346 1717 aa23.36■■□□□ 1.33
RBBP4-218ENST00000527118 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.33
RBBP4-218ENST00000527118 MPHOSPH9Q99550 1183 aa23.31■■□□□ 1.32
RBBP4-218ENST00000527118 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
RBBP4-218ENST00000527118 SOCS7O14512 581 aa23.3■■□□□ 1.32
RBBP4-218ENST00000527118 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
RBBP4-218ENST00000527118 ATF3P18847 181 aa23.29■■□□□ 1.32
RBBP4-218ENST00000527118 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
RBBP4-218ENST00000527118 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
RBBP4-218ENST00000527118 CCDC144AA2RUR9 1427 aa23.27■■□□□ 1.32
RBBP4-218ENST00000527118 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
RBBP4-218ENST00000527118 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
RBBP4-218ENST00000527118 NALCNQ8IZF0 1738 aa23.26■■□□□ 1.31
RBBP4-218ENST00000527118 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
RBBP4-218ENST00000527118 COL16A1Q07092 1604 aaPredicted RBP23.25■■□□□ 1.31
RBBP4-218ENST00000527118 RGL3Q3MIN7 710 aa23.22■■□□□ 1.31
RBBP4-218ENST00000527118 DCCP43146 1447 aa23.22■■□□□ 1.31
RBBP4-218ENST00000527118 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
RBBP4-218ENST00000527118 AHDC1Q5TGY3 1603 aaPredicted RBP23.2■■□□□ 1.3
RBBP4-218ENST00000527118 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
RBBP4-218ENST00000527118 ADGRL3Q9HAR2 1447 aa23.19■■□□□ 1.3
RBBP4-218ENST00000527118 MST1RQ04912 1400 aa23.17■■□□□ 1.3
RBBP4-218ENST00000527118 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
RBBP4-218ENST00000527118 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
RBBP4-218ENST00000527118 JCADQ9P266 1359 aa23.16■■□□□ 1.3
RBBP4-218ENST00000527118 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
RBBP4-218ENST00000527118 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
RBBP4-218ENST00000527118 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
RBBP4-218ENST00000527118 ASXL1Q8IXJ9 1541 aa23.16■■□□□ 1.3
RBBP4-218ENST00000527118 ROBO2Q9HCK4 1378 aa23.15■■□□□ 1.3
RBBP4-218ENST00000527118 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.29
RBBP4-218ENST00000527118 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
RBBP4-218ENST00000527118 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
RBBP4-218ENST00000527118 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
RBBP4-218ENST00000527118 PIK3C2GO75747 1445 aa23.08■■□□□ 1.28
RBBP4-218ENST00000527118 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
RBBP4-218ENST00000527118 LRP6O75581 1613 aa23.07■■□□□ 1.28
RBBP4-218ENST00000527118 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
RBBP4-218ENST00000527118 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
RBBP4-218ENST00000527118 STK26Q9P289 416 aa23.05■■□□□ 1.28
RBBP4-218ENST00000527118 TMEM132EQ6IEE7 984 aa23.04■■□□□ 1.28
RBBP4-218ENST00000527118 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
RBBP4-218ENST00000527118 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
RBBP4-218ENST00000527118 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
RBBP4-218ENST00000527118 MYOM2P54296 1465 aa23.01■■□□□ 1.27
RBBP4-218ENST00000527118 CDC42BPGQ6DT37 1551 aa23.01■■□□□ 1.27
RBBP4-218ENST00000527118 LAMC1P11047 1609 aa23■■□□□ 1.27
RBBP4-218ENST00000527118 TECPR2O15040 1411 aa23■■□□□ 1.27
RBBP4-218ENST00000527118 MEX3CQ5U5Q3 659 aaKnown RBP23■■□□□ 1.27
RBBP4-218ENST00000527118 WAPLQ7Z5K2 1190 aa23■■□□□ 1.27
RBBP4-218ENST00000527118 NRXN1Q9ULB1 1477 aa22.99■■□□□ 1.27
RBBP4-218ENST00000527118 ORAI2Q96SN7 254 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms