RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-204ENST00000526884 RIMS2Q9UQ26 1411 aa35.63■■■■□ 3.29
NFRKB-204ENST00000526884 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.58■■■■□ 3.29
NFRKB-204ENST00000526884 PLEKHG1Q9ULL1 1385 aa35.58■■■■□ 3.29
NFRKB-204ENST00000526884 SLC4A1APQ9BWU0 796 aaKnown RBP35.57■■■■□ 3.28
NFRKB-204ENST00000526884 SETD5Q9C0A6 1442 aa35.57■■■■□ 3.28
NFRKB-204ENST00000526884 CHGAP10645 457 aaKnown RBP35.56■■■■□ 3.28
NFRKB-204ENST00000526884 DIP2AQ14689 1571 aa35.53■■■■□ 3.28
NFRKB-204ENST00000526884 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
NFRKB-204ENST00000526884 NWD1Q149M9 1564 aa35.51■■■■□ 3.27
NFRKB-204ENST00000526884 LRRC7Q96NW7 1537 aa35.5■■■■□ 3.27
NFRKB-204ENST00000526884 CHD2O14647 1828 aaKnown RBP35.48■■■■□ 3.27
NFRKB-204ENST00000526884 XIRP1Q702N8 1843 aaKnown RBP35.46■■■■□ 3.27
NFRKB-204ENST00000526884 NKTRP30414 1462 aaKnown RBP35.44■■■■□ 3.26
NFRKB-204ENST00000526884 NEXMIFQ5QGS0 1516 aa35.42■■■■□ 3.26
NFRKB-204ENST00000526884 RAB3GAP2Q9H2M9 1393 aa35.41■■■■□ 3.26
NFRKB-204ENST00000526884 BCANQ96GW7 911 aa35.41■■■■□ 3.26
NFRKB-204ENST00000526884 SETBP1Q9Y6X0 1596 aa35.4■■■■□ 3.26
NFRKB-204ENST00000526884 SLC26A8Q96RN1 970 aa35.4■■■■□ 3.26
NFRKB-204ENST00000526884 MPHOSPH9Q99550 1183 aa35.4■■■■□ 3.26
NFRKB-204ENST00000526884 UBAP1LF5GYI3 381 aa35.39■■■■□ 3.26
NFRKB-204ENST00000526884 KCNA6P17658 529 aa35.38■■■■□ 3.25
NFRKB-204ENST00000526884 NRXN3Q9Y4C0 1643 aa35.37■■■■□ 3.25
NFRKB-204ENST00000526884 ADAMTS13Q76LX8 1427 aa35.37■■■■□ 3.25
NFRKB-204ENST00000526884 ZNF326Q5BKZ1 582 aaKnown RBP35.36■■■■□ 3.25
NFRKB-204ENST00000526884 TBX22Q9Y458 520 aa35.36■■■■□ 3.25
NFRKB-204ENST00000526884 PIK3R4Q99570 1358 aa35.36■■■■□ 3.25
NFRKB-204ENST00000526884 PPLO60437 1756 aa35.35■■■■□ 3.25
NFRKB-204ENST00000526884 CCDC144AA2RUR9 1427 aa35.34■■■■□ 3.25
NFRKB-204ENST00000526884 TOM1O60784 492 aa35.34■■■■□ 3.25
NFRKB-204ENST00000526884 HRCP23327 699 aa35.3■■■■□ 3.24
NFRKB-204ENST00000526884 ALKQ9UM73 1620 aa35.29■■■■□ 3.24
NFRKB-204ENST00000526884 NUTM2DQ5VT03 806 aaPredicted RBP35.29■■■■□ 3.24
NFRKB-204ENST00000526884 RPGRIP1LQ68CZ1 1315 aa35.28■■■■□ 3.24
NFRKB-204ENST00000526884 IFT172Q9UG01 1749 aa35.26■■■■□ 3.23
NFRKB-204ENST00000526884 FOXD1Q16676 465 aa35.25■■■■□ 3.23
NFRKB-204ENST00000526884 TMEM94Q12767 1356 aa35.24■■■■□ 3.23
NFRKB-204ENST00000526884 XRN1Q8IZH2 1706 aaKnown RBP35.22■■■■□ 3.23
NFRKB-204ENST00000526884 VGFO15240 615 aaPredicted RBP35.2■■■■□ 3.23
NFRKB-204ENST00000526884 SPATA31E1Q6ZUB1 1445 aa35.2■■■■□ 3.23
NFRKB-204ENST00000526884 SETD1AO15047 1707 aaKnown RBP35.2■■■■□ 3.23
NFRKB-204ENST00000526884 PROSER2Q86WR7 435 aaPredicted RBP35.19■■■■□ 3.22
NFRKB-204ENST00000526884 NCOA3Q9Y6Q9 1424 aa35.19■■■■□ 3.22
NFRKB-204ENST00000526884 SENP3Q9H4L4 574 aaPredicted RBP35.18■■■■□ 3.22
NFRKB-204ENST00000526884 SCAF1Q9H7N4 1312 aaKnown RBP35.11■■■■□ 3.21
NFRKB-204ENST00000526884 MSH6P52701 1360 aa35.11■■■■□ 3.21
NFRKB-204ENST00000526884 ANKRD30BQ9BXX2 1392 aa35.11■■■■□ 3.21
NFRKB-204ENST00000526884 PTPRUQ92729 1446 aa35.1■■■■□ 3.21
NFRKB-204ENST00000526884 PIP4K2BP78356 416 aa35.1■■■■□ 3.21
NFRKB-204ENST00000526884 AMOTL2Q9Y2J4 779 aa35.06■■■■□ 3.2
NFRKB-204ENST00000526884 METP08581 1390 aa35.05■■■■□ 3.2
NFRKB-204ENST00000526884 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.03■■■■□ 3.2
NFRKB-204ENST00000526884 PRAG1Q86YV5 1406 aa35.02■■■■□ 3.2
NFRKB-204ENST00000526884 FAM135BQ49AJ0 1406 aa34.99■■■■□ 3.19
NFRKB-204ENST00000526884 RGL3Q3MIN7 710 aa34.99■■■■□ 3.19
NFRKB-204ENST00000526884 ROBO1Q9Y6N7 1651 aa34.98■■■■□ 3.19
NFRKB-204ENST00000526884 MYOM2P54296 1465 aa34.98■■■■□ 3.19
NFRKB-204ENST00000526884 LAMC1P11047 1609 aa34.98■■■■□ 3.19
NFRKB-204ENST00000526884 PTCH1Q13635 1447 aa34.98■■■■□ 3.19
NFRKB-204ENST00000526884 RBM33Q96EV2 1170 aaKnown RBP34.97■■■■□ 3.19
NFRKB-204ENST00000526884 DCCP43146 1447 aa34.97■■■■□ 3.19
NFRKB-204ENST00000526884 PIK3C2GO75747 1445 aa34.96■■■■□ 3.19
NFRKB-204ENST00000526884 HSPA1LP34931 641 aa34.95■■■■□ 3.19
NFRKB-204ENST00000526884 NRXN1Q9ULB1 1477 aa34.93■■■■□ 3.18
NFRKB-204ENST00000526884 ADGRF5Q8IZF2 1346 aa34.92■■■■□ 3.18
NFRKB-204ENST00000526884 C14orf37Q86TY3 774 aa34.92■■■■□ 3.18
NFRKB-204ENST00000526884 C19orf44Q9H6X5 657 aa34.92■■■■□ 3.18
NFRKB-204ENST00000526884 KNDC1Q76NI1 1749 aa34.92■■■■□ 3.18
NFRKB-204ENST00000526884 NALCNQ8IZF0 1738 aa34.92■■■■□ 3.18
NFRKB-204ENST00000526884 CADPS2Q86UW7 1296 aa34.89■■■■□ 3.18
NFRKB-204ENST00000526884 ADGRL3Q9HAR2 1447 aa34.88■■■■□ 3.17
NFRKB-204ENST00000526884 SLAIN2Q9P270 581 aa34.85■■■■□ 3.17
NFRKB-204ENST00000526884 ATF3P18847 181 aa34.84■■■■□ 3.17
NFRKB-204ENST00000526884 TECPR2O15040 1411 aa34.82■■■■□ 3.17
NFRKB-204ENST00000526884 ASXL1Q8IXJ9 1541 aa34.82■■■■□ 3.16
NFRKB-204ENST00000526884 STAC3Q96MF2 364 aa34.81■■■■□ 3.16
NFRKB-204ENST00000526884 ROBO2Q9HCK4 1378 aa34.79■■■■□ 3.16
NFRKB-204ENST00000526884 PHLPP1O60346 1717 aa34.79■■■■□ 3.16
NFRKB-204ENST00000526884 LRPPRCP42704 1394 aaKnown RBP34.76■■■■□ 3.16
NFRKB-204ENST00000526884 AHDC1Q5TGY3 1603 aaPredicted RBP34.73■■■■□ 3.15
NFRKB-204ENST00000526884 C14orf93Q9H972 538 aaKnown RBP34.73■■■■□ 3.15
NFRKB-204ENST00000526884 ABCC11Q96J66 1382 aa34.73■■■■□ 3.15
NFRKB-204ENST00000526884 MST1RQ04912 1400 aa34.72■■■■□ 3.15
NFRKB-204ENST00000526884 MED1Q15648 1581 aaPredicted RBP34.72■■■■□ 3.15
NFRKB-204ENST00000526884 YTHDC2Q9H6S0 1430 aaKnown RBP34.72■■■■□ 3.15
NFRKB-204ENST00000526884 CDC42BPGQ6DT37 1551 aa34.7■■■■□ 3.15
NFRKB-204ENST00000526884 DISP3Q9P2K9 1392 aa34.69■■■■□ 3.14
NFRKB-204ENST00000526884 COL16A1Q07092 1604 aaPredicted RBP34.69■■■■□ 3.14
NFRKB-204ENST00000526884 NHSL1Q5SYE7 1610 aa34.66■■■■□ 3.14
NFRKB-204ENST00000526884 TRIM26Q12899 539 aaPredicted RBP34.66■■■■□ 3.14
NFRKB-204ENST00000526884 DHX57Q6P158 1386 aaKnown RBP34.65■■■■□ 3.14
NFRKB-204ENST00000526884 DCAF11Q8TEB1 546 aa34.64■■■■□ 3.14
NFRKB-204ENST00000526884 ADGRB1O14514 1584 aa34.64■■■■□ 3.14
NFRKB-204ENST00000526884 KIAA1210Q9ULL0 1709 aa34.64■■■■□ 3.14
NFRKB-204ENST00000526884 DLC1Q96QB1 1528 aa34.63■■■■□ 3.13
NFRKB-204ENST00000526884 CFAP70Q5T0N1 1121 aa34.62■■■■□ 3.13
NFRKB-204ENST00000526884 TMEM132EQ6IEE7 984 aa34.62■■■■□ 3.13
NFRKB-204ENST00000526884 SIRT1Q96EB6 747 aa34.62■■■■□ 3.13
NFRKB-204ENST00000526884 BRINP3Q76B58 766 aa34.59■■■■□ 3.13
NFRKB-204ENST00000526884 STK26Q9P289 416 aa34.59■■■■□ 3.13
NFRKB-204ENST00000526884 C1orf167Q5SNV9 1468 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms