RNA–Protein interactions for RNA: ENST00000526836.1

PDZD3-205, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-205ENST00000526836 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
PDZD3-205ENST00000526836 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
PDZD3-205ENST00000526836 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
PDZD3-205ENST00000526836 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
PDZD3-205ENST00000526836 TMEM131LA2VDJ0 1609 aa16.73■□□□□ 0.27
PDZD3-205ENST00000526836 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
PDZD3-205ENST00000526836 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
PDZD3-205ENST00000526836 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
PDZD3-205ENST00000526836 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
PDZD3-205ENST00000526836 TRPM2O94759 1503 aa16.7■□□□□ 0.26
PDZD3-205ENST00000526836 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
PDZD3-205ENST00000526836 KCNA6P17658 529 aa16.7■□□□□ 0.26
PDZD3-205ENST00000526836 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
PDZD3-205ENST00000526836 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
PDZD3-205ENST00000526836 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
PDZD3-205ENST00000526836 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
PDZD3-205ENST00000526836 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
PDZD3-205ENST00000526836 FBXO41Q8TF61 875 aa16.66■□□□□ 0.26
PDZD3-205ENST00000526836 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
PDZD3-205ENST00000526836 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
PDZD3-205ENST00000526836 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
PDZD3-205ENST00000526836 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-205ENST00000526836 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
PDZD3-205ENST00000526836 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
PDZD3-205ENST00000526836 ADAMTS13Q76LX8 1427 aa16.63■□□□□ 0.25
PDZD3-205ENST00000526836 AMOTL2Q9Y2J4 779 aa16.63■□□□□ 0.25
PDZD3-205ENST00000526836 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
PDZD3-205ENST00000526836 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
PDZD3-205ENST00000526836 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
PDZD3-205ENST00000526836 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
PDZD3-205ENST00000526836 METP08581 1390 aa16.6■□□□□ 0.25
PDZD3-205ENST00000526836 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
PDZD3-205ENST00000526836 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
PDZD3-205ENST00000526836 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
PDZD3-205ENST00000526836 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
PDZD3-205ENST00000526836 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
PDZD3-205ENST00000526836 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
PDZD3-205ENST00000526836 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
PDZD3-205ENST00000526836 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 TOM1O60784 492 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 CPS1P31327 1500 aa16.55■□□□□ 0.24
PDZD3-205ENST00000526836 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
PDZD3-205ENST00000526836 STK26Q9P289 416 aa16.54■□□□□ 0.24
PDZD3-205ENST00000526836 KIF1BO60333 1816 aa16.54■□□□□ 0.24
PDZD3-205ENST00000526836 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
PDZD3-205ENST00000526836 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
PDZD3-205ENST00000526836 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
PDZD3-205ENST00000526836 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
PDZD3-205ENST00000526836 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
PDZD3-205ENST00000526836 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
PDZD3-205ENST00000526836 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
PDZD3-205ENST00000526836 WAPLQ7Z5K2 1190 aa16.47■□□□□ 0.23
PDZD3-205ENST00000526836 ALKQ9UM73 1620 aa16.47■□□□□ 0.23
PDZD3-205ENST00000526836 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
PDZD3-205ENST00000526836 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
PDZD3-205ENST00000526836 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
PDZD3-205ENST00000526836 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
PDZD3-205ENST00000526836 ATF3P18847 181 aa16.44■□□□□ 0.22
PDZD3-205ENST00000526836 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
PDZD3-205ENST00000526836 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 NKTRP30414 1462 aaKnown RBP16.43■□□□□ 0.22
PDZD3-205ENST00000526836 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
PDZD3-205ENST00000526836 MSH6P52701 1360 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 NCOA3Q9Y6Q9 1424 aa16.43■□□□□ 0.22
PDZD3-205ENST00000526836 PPLO60437 1756 aa16.42■□□□□ 0.22
PDZD3-205ENST00000526836 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
PDZD3-205ENST00000526836 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
PDZD3-205ENST00000526836 MYOM2P54296 1465 aa16.42■□□□□ 0.22
PDZD3-205ENST00000526836 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
PDZD3-205ENST00000526836 NWD1Q149M9 1564 aa16.4■□□□□ 0.22
PDZD3-205ENST00000526836 YTHDC2Q9H6S0 1430 aaKnown RBP16.39■□□□□ 0.21
PDZD3-205ENST00000526836 HSPA1LP34931 641 aa16.39■□□□□ 0.21
PDZD3-205ENST00000526836 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDZD3-205ENST00000526836 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
PDZD3-205ENST00000526836 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
PDZD3-205ENST00000526836 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
PDZD3-205ENST00000526836 POGKQ9P215 609 aa16.38■□□□□ 0.21
PDZD3-205ENST00000526836 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
PDZD3-205ENST00000526836 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
PDZD3-205ENST00000526836 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
PDZD3-205ENST00000526836 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
PDZD3-205ENST00000526836 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
PDZD3-205ENST00000526836 NUTM2FA1L443 756 aa16.33■□□□□ 0.2
PDZD3-205ENST00000526836 TECPR2O15040 1411 aa16.33■□□□□ 0.2
PDZD3-205ENST00000526836 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
PDZD3-205ENST00000526836 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
PDZD3-205ENST00000526836 ASXL1Q8IXJ9 1541 aa16.32■□□□□ 0.2
PDZD3-205ENST00000526836 ORAI2Q96SN7 254 aa16.32■□□□□ 0.2
PDZD3-205ENST00000526836 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
PDZD3-205ENST00000526836 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
PDZD3-205ENST00000526836 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
PDZD3-205ENST00000526836 ADGRL3Q9HAR2 1447 aa16.31■□□□□ 0.2
PDZD3-205ENST00000526836 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms