RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 BCAMP50895 628 aa10.44□□□□□ -0.74
ATPAF1-208ENST00000526821 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
ATPAF1-208ENST00000526821 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
ATPAF1-208ENST00000526821 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
ATPAF1-208ENST00000526821 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
ATPAF1-208ENST00000526821 PPP4CP60510 307 aa10.41□□□□□ -0.74
ATPAF1-208ENST00000526821 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
ATPAF1-208ENST00000526821 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
ATPAF1-208ENST00000526821 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
ATPAF1-208ENST00000526821 GNPATO15228 680 aa10.39□□□□□ -0.75
ATPAF1-208ENST00000526821 RNF40O75150 1001 aa10.39□□□□□ -0.75
ATPAF1-208ENST00000526821 OATP04181 439 aa10.38□□□□□ -0.75
ATPAF1-208ENST00000526821 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
ATPAF1-208ENST00000526821 DNAJB2P25686 324 aa10.37□□□□□ -0.75
ATPAF1-208ENST00000526821 EYA1Q99502 592 aa10.36□□□□□ -0.75
ATPAF1-208ENST00000526821 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
ATPAF1-208ENST00000526821 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
ATPAF1-208ENST00000526821 C3orf80F5H4A9 247 aa10.35□□□□□ -0.75
ATPAF1-208ENST00000526821 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
ATPAF1-208ENST00000526821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
ATPAF1-208ENST00000526821 PRR14Q9BWN1 585 aa10.31□□□□□ -0.76
ATPAF1-208ENST00000526821 CFTRP13569 1480 aa10.3□□□□□ -0.76
ATPAF1-208ENST00000526821 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
ATPAF1-208ENST00000526821 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
ATPAF1-208ENST00000526821 GPR37O15354 613 aa10.29□□□□□ -0.76
ATPAF1-208ENST00000526821 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
ATPAF1-208ENST00000526821 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
ATPAF1-208ENST00000526821 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
ATPAF1-208ENST00000526821 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
ATPAF1-208ENST00000526821 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
ATPAF1-208ENST00000526821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATPAF1-208ENST00000526821 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
ATPAF1-208ENST00000526821 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
ATPAF1-208ENST00000526821 KCNC4Q03721 635 aa10.26□□□□□ -0.77
ATPAF1-208ENST00000526821 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
ATPAF1-208ENST00000526821 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
ATPAF1-208ENST00000526821 FECHP22830 423 aa10.25□□□□□ -0.77
ATPAF1-208ENST00000526821 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
ATPAF1-208ENST00000526821 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
ATPAF1-208ENST00000526821 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
ATPAF1-208ENST00000526821 IL21Q9HBE4 155 aa10.21□□□□□ -0.77
ATPAF1-208ENST00000526821 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
ATPAF1-208ENST00000526821 MINK1Q8N4C8 1332 aaPredicted RBP10.21□□□□□ -0.78
ATPAF1-208ENST00000526821 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
ATPAF1-208ENST00000526821 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
ATPAF1-208ENST00000526821 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
ATPAF1-208ENST00000526821 APLP1P51693 650 aa10.19□□□□□ -0.78
ATPAF1-208ENST00000526821 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
ATPAF1-208ENST00000526821 CFHP08603 1231 aa10.18□□□□□ -0.78
ATPAF1-208ENST00000526821 MTRQ99707 1265 aa10.18□□□□□ -0.78
ATPAF1-208ENST00000526821 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
ATPAF1-208ENST00000526821 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
ATPAF1-208ENST00000526821 A0A0G2JS52 829 aa10.17□□□□□ -0.78
ATPAF1-208ENST00000526821 IRF6O14896 467 aa10.17□□□□□ -0.78
ATPAF1-208ENST00000526821 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
ATPAF1-208ENST00000526821 NESP48681 1621 aa10.16□□□□□ -0.78
ATPAF1-208ENST00000526821 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
ATPAF1-208ENST00000526821 RGS20O76081 388 aa10.15□□□□□ -0.78
ATPAF1-208ENST00000526821 TJAP1Q5JTD0 557 aa10.15□□□□□ -0.78
ATPAF1-208ENST00000526821 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
ATPAF1-208ENST00000526821 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
ATPAF1-208ENST00000526821 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
ATPAF1-208ENST00000526821 FANCD2Q9BXW9 1451 aa10.13□□□□□ -0.79
ATPAF1-208ENST00000526821 COPS2P61201 443 aa10.13□□□□□ -0.79
ATPAF1-208ENST00000526821 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
ATPAF1-208ENST00000526821 BCANQ96GW7 911 aa10.13□□□□□ -0.79
ATPAF1-208ENST00000526821 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
ATPAF1-208ENST00000526821 SLC10A3P09131 477 aa10.12□□□□□ -0.79
ATPAF1-208ENST00000526821 CUX1P39880 1505 aa10.12□□□□□ -0.79
ATPAF1-208ENST00000526821 GGCXP38435 758 aa10.11□□□□□ -0.79
ATPAF1-208ENST00000526821 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
ATPAF1-208ENST00000526821 NR1I2O75469 434 aa10.1□□□□□ -0.79
ATPAF1-208ENST00000526821 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
ATPAF1-208ENST00000526821 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
ATPAF1-208ENST00000526821 PDS5BQ9NTI5 1447 aa10.09□□□□□ -0.79
ATPAF1-208ENST00000526821 ZPR1O75312 459 aa10.09□□□□□ -0.79
ATPAF1-208ENST00000526821 ZMYND10O75800 440 aa10.09□□□□□ -0.79
ATPAF1-208ENST00000526821 CLCN1P35523 988 aa10.09□□□□□ -0.79
ATPAF1-208ENST00000526821 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
ATPAF1-208ENST00000526821 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
ATPAF1-208ENST00000526821 GRIPAP1Q4V328 841 aa10.08□□□□□ -0.8
ATPAF1-208ENST00000526821 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
ATPAF1-208ENST00000526821 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
ATPAF1-208ENST00000526821 CEP164Q9UPV0 1460 aa10.06□□□□□ -0.8
ATPAF1-208ENST00000526821 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
ATPAF1-208ENST00000526821 SOGA1O94964 1423 aa10.06□□□□□ -0.8
ATPAF1-208ENST00000526821 GCGRP47871 477 aa10.05□□□□□ -0.8
ATPAF1-208ENST00000526821 EEA1Q15075 1411 aa10.05□□□□□ -0.8
ATPAF1-208ENST00000526821 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
ATPAF1-208ENST00000526821 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
ATPAF1-208ENST00000526821 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.8
ATPAF1-208ENST00000526821 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
ATPAF1-208ENST00000526821 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
ATPAF1-208ENST00000526821 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.02□□□□□ -0.81
ATPAF1-208ENST00000526821 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
ATPAF1-208ENST00000526821 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.81
ATPAF1-208ENST00000526821 CD46P15529 392 aa10.01□□□□□ -0.81
ATPAF1-208ENST00000526821 FUT2Q10981 343 aa10.01□□□□□ -0.81
ATPAF1-208ENST00000526821 PPP1R18Q6NYC8 613 aa10.01□□□□□ -0.81
ATPAF1-208ENST00000526821 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms