RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
SNRNP35-203ENST00000526639 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
SNRNP35-203ENST00000526639 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
SNRNP35-203ENST00000526639 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
SNRNP35-203ENST00000526639 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
SNRNP35-203ENST00000526639 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
SNRNP35-203ENST00000526639 CPS1P31327 1500 aa16.63■□□□□ 0.25
SNRNP35-203ENST00000526639 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
SNRNP35-203ENST00000526639 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
SNRNP35-203ENST00000526639 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
SNRNP35-203ENST00000526639 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
SNRNP35-203ENST00000526639 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.25
SNRNP35-203ENST00000526639 LRRC7Q96NW7 1537 aa16.58■□□□□ 0.24
SNRNP35-203ENST00000526639 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
SNRNP35-203ENST00000526639 PLEKHG1Q9ULL1 1385 aa16.58■□□□□ 0.24
SNRNP35-203ENST00000526639 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 PIP4K2BP78356 416 aa16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 TRPM2O94759 1503 aa16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
SNRNP35-203ENST00000526639 TOM1O60784 492 aa16.55■□□□□ 0.24
SNRNP35-203ENST00000526639 KCNA6P17658 529 aa16.55■□□□□ 0.24
SNRNP35-203ENST00000526639 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
SNRNP35-203ENST00000526639 ADAMTS13Q76LX8 1427 aa16.51■□□□□ 0.23
SNRNP35-203ENST00000526639 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
SNRNP35-203ENST00000526639 TBX22Q9Y458 520 aa16.51■□□□□ 0.23
SNRNP35-203ENST00000526639 KIF1BO60333 1816 aa16.51■□□□□ 0.23
SNRNP35-203ENST00000526639 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
SNRNP35-203ENST00000526639 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
SNRNP35-203ENST00000526639 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
SNRNP35-203ENST00000526639 CCDC144AA2RUR9 1427 aa16.47■□□□□ 0.23
SNRNP35-203ENST00000526639 NEXMIFQ5QGS0 1516 aa16.47■□□□□ 0.23
SNRNP35-203ENST00000526639 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
SNRNP35-203ENST00000526639 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
SNRNP35-203ENST00000526639 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
SNRNP35-203ENST00000526639 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
SNRNP35-203ENST00000526639 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
SNRNP35-203ENST00000526639 HSPA1LP34931 641 aa16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 AMOTL2Q9Y2J4 779 aa16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 VGFO15240 615 aaPredicted RBP16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 DIP2AQ14689 1571 aa16.44■□□□□ 0.22
SNRNP35-203ENST00000526639 PTPRUQ92729 1446 aa16.43■□□□□ 0.22
SNRNP35-203ENST00000526639 METP08581 1390 aa16.43■□□□□ 0.22
SNRNP35-203ENST00000526639 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
SNRNP35-203ENST00000526639 PIK3R4Q99570 1358 aa16.41■□□□□ 0.22
SNRNP35-203ENST00000526639 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
SNRNP35-203ENST00000526639 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
SNRNP35-203ENST00000526639 MSH6P52701 1360 aa16.4■□□□□ 0.22
SNRNP35-203ENST00000526639 SPATA31E1Q6ZUB1 1445 aa16.39■□□□□ 0.21
SNRNP35-203ENST00000526639 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
SNRNP35-203ENST00000526639 PPLO60437 1756 aa16.38■□□□□ 0.21
SNRNP35-203ENST00000526639 HRCP23327 699 aa16.38■□□□□ 0.21
SNRNP35-203ENST00000526639 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
SNRNP35-203ENST00000526639 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
SNRNP35-203ENST00000526639 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
SNRNP35-203ENST00000526639 ANKRD30BQ9BXX2 1392 aa16.34■□□□□ 0.21
SNRNP35-203ENST00000526639 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.21
SNRNP35-203ENST00000526639 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
SNRNP35-203ENST00000526639 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
SNRNP35-203ENST00000526639 ATF3P18847 181 aa16.32■□□□□ 0.2
SNRNP35-203ENST00000526639 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
SNRNP35-203ENST00000526639 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
SNRNP35-203ENST00000526639 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
SNRNP35-203ENST00000526639 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
SNRNP35-203ENST00000526639 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
SNRNP35-203ENST00000526639 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
SNRNP35-203ENST00000526639 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
SNRNP35-203ENST00000526639 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
SNRNP35-203ENST00000526639 STK26Q9P289 416 aa16.29■□□□□ 0.2
SNRNP35-203ENST00000526639 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
SNRNP35-203ENST00000526639 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
SNRNP35-203ENST00000526639 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
SNRNP35-203ENST00000526639 CFAP70Q5T0N1 1121 aa16.26■□□□□ 0.19
SNRNP35-203ENST00000526639 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
SNRNP35-203ENST00000526639 ADGRL3Q9HAR2 1447 aa16.24■□□□□ 0.19
SNRNP35-203ENST00000526639 WAPLQ7Z5K2 1190 aa16.24■□□□□ 0.19
SNRNP35-203ENST00000526639 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
SNRNP35-203ENST00000526639 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
SNRNP35-203ENST00000526639 DCCP43146 1447 aa16.23■□□□□ 0.19
SNRNP35-203ENST00000526639 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
SNRNP35-203ENST00000526639 MYOM2P54296 1465 aa16.22■□□□□ 0.19
SNRNP35-203ENST00000526639 ASXL1Q8IXJ9 1541 aa16.22■□□□□ 0.19
SNRNP35-203ENST00000526639 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
SNRNP35-203ENST00000526639 MST1RQ04912 1400 aa16.21■□□□□ 0.19
SNRNP35-203ENST00000526639 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
SNRNP35-203ENST00000526639 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
SNRNP35-203ENST00000526639 ILDR2Q71H61 639 aa16.2■□□□□ 0.18
SNRNP35-203ENST00000526639 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 DHX57Q6P158 1386 aaKnown RBP16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 YTHDC2Q9H6S0 1430 aaKnown RBP16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
SNRNP35-203ENST00000526639 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
SNRNP35-203ENST00000526639 TECPR2O15040 1411 aa16.17■□□□□ 0.18
SNRNP35-203ENST00000526639 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
SNRNP35-203ENST00000526639 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms