RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
PCDHB18P-202ENST00000526308 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
PCDHB18P-202ENST00000526308 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
PCDHB18P-202ENST00000526308 IGHDP01880 384 aa17.71■□□□□ 0.43
PCDHB18P-202ENST00000526308 ABCA8O94911 1581 aa17.71■□□□□ 0.43
PCDHB18P-202ENST00000526308 BECN1Q14457 450 aa17.71■□□□□ 0.43
PCDHB18P-202ENST00000526308 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
PCDHB18P-202ENST00000526308 E9PSI1 815 aa17.71■□□□□ 0.42
PCDHB18P-202ENST00000526308 SYCP2Q9BX26 1530 aa17.7■□□□□ 0.42
PCDHB18P-202ENST00000526308 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
PCDHB18P-202ENST00000526308 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
PCDHB18P-202ENST00000526308 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
PCDHB18P-202ENST00000526308 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
PCDHB18P-202ENST00000526308 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
PCDHB18P-202ENST00000526308 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
PCDHB18P-202ENST00000526308 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
PCDHB18P-202ENST00000526308 UPF2Q9HAU5 1272 aaKnown RBP17.67■□□□□ 0.42
PCDHB18P-202ENST00000526308 EIF3AQ14152 1382 aaKnown RBP17.67■□□□□ 0.42
PCDHB18P-202ENST00000526308 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
PCDHB18P-202ENST00000526308 CLUAP1Q96AJ1 413 aa17.67■□□□□ 0.42
PCDHB18P-202ENST00000526308 NUP160Q12769 1436 aa17.66■□□□□ 0.42
PCDHB18P-202ENST00000526308 SEC24BO95487 1268 aa17.66■□□□□ 0.42
PCDHB18P-202ENST00000526308 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
PCDHB18P-202ENST00000526308 POGKQ9P215 609 aa17.65■□□□□ 0.42
PCDHB18P-202ENST00000526308 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
PCDHB18P-202ENST00000526308 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.42
PCDHB18P-202ENST00000526308 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
PCDHB18P-202ENST00000526308 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
PCDHB18P-202ENST00000526308 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
PCDHB18P-202ENST00000526308 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
PCDHB18P-202ENST00000526308 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
PCDHB18P-202ENST00000526308 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
PCDHB18P-202ENST00000526308 LAMC1P11047 1609 aa17.62■□□□□ 0.41
PCDHB18P-202ENST00000526308 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
PCDHB18P-202ENST00000526308 PIK3C2GO75747 1445 aa17.61■□□□□ 0.41
PCDHB18P-202ENST00000526308 CDC42BPBQ9Y5S2 1711 aa17.6■□□□□ 0.41
PCDHB18P-202ENST00000526308 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
PCDHB18P-202ENST00000526308 USP19O94966 1318 aa17.59■□□□□ 0.41
PCDHB18P-202ENST00000526308 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
PCDHB18P-202ENST00000526308 PREX2Q70Z35 1606 aa17.58■□□□□ 0.41
PCDHB18P-202ENST00000526308 UNC13BO14795 1591 aa17.58■□□□□ 0.4
PCDHB18P-202ENST00000526308 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
PCDHB18P-202ENST00000526308 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
PCDHB18P-202ENST00000526308 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
PCDHB18P-202ENST00000526308 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
PCDHB18P-202ENST00000526308 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
PCDHB18P-202ENST00000526308 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
PCDHB18P-202ENST00000526308 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
PCDHB18P-202ENST00000526308 DUOX2Q9NRD8 1548 aa17.55■□□□□ 0.4
PCDHB18P-202ENST00000526308 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
PCDHB18P-202ENST00000526308 L1TD1Q5T7N2 865 aaKnown RBP17.54■□□□□ 0.4
PCDHB18P-202ENST00000526308 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
PCDHB18P-202ENST00000526308 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
PCDHB18P-202ENST00000526308 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 SYNMO15061 1565 aa17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
PCDHB18P-202ENST00000526308 AFAP1Q8N556 730 aa17.52■□□□□ 0.4
PCDHB18P-202ENST00000526308 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
PCDHB18P-202ENST00000526308 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
PCDHB18P-202ENST00000526308 ATP10AO60312 1499 aa17.52■□□□□ 0.4
PCDHB18P-202ENST00000526308 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.39
PCDHB18P-202ENST00000526308 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.39
PCDHB18P-202ENST00000526308 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.39
PCDHB18P-202ENST00000526308 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 RLBP1P12271 317 aa17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 NINLQ9Y2I6 1382 aa17.51■□□□□ 0.39
PCDHB18P-202ENST00000526308 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
PCDHB18P-202ENST00000526308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.39
PCDHB18P-202ENST00000526308 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
PCDHB18P-202ENST00000526308 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
PCDHB18P-202ENST00000526308 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
PCDHB18P-202ENST00000526308 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
PCDHB18P-202ENST00000526308 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
PCDHB18P-202ENST00000526308 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
PCDHB18P-202ENST00000526308 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
PCDHB18P-202ENST00000526308 KIF3BO15066 747 aa17.48■□□□□ 0.39
PCDHB18P-202ENST00000526308 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
PCDHB18P-202ENST00000526308 PLXNC1O60486 1568 aa17.46■□□□□ 0.39
PCDHB18P-202ENST00000526308 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.39
PCDHB18P-202ENST00000526308 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.39
PCDHB18P-202ENST00000526308 KANK1Q14678 1352 aa17.46■□□□□ 0.39
PCDHB18P-202ENST00000526308 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
PCDHB18P-202ENST00000526308 SCAPERQ9BY12 1400 aa17.46■□□□□ 0.38
PCDHB18P-202ENST00000526308 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.38
PCDHB18P-202ENST00000526308 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
PCDHB18P-202ENST00000526308 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
PCDHB18P-202ENST00000526308 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
PCDHB18P-202ENST00000526308 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
PCDHB18P-202ENST00000526308 MTHFSP49914 203 aa17.44■□□□□ 0.38
PCDHB18P-202ENST00000526308 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHB18P-202ENST00000526308 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
PCDHB18P-202ENST00000526308 RRAGDQ9NQL2 400 aaPredicted RBP17.43■□□□□ 0.38
PCDHB18P-202ENST00000526308 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
PCDHB18P-202ENST00000526308 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms