RNA–Protein interactions for RNA: ENST00000525957.1

ME3-204, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-204ENST00000525957 NWD1Q149M9 1564 aa23.92■■□□□ 1.42
ME3-204ENST00000525957 KCNA6P17658 529 aa23.92■■□□□ 1.42
ME3-204ENST00000525957 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
ME3-204ENST00000525957 PPP1R15AO75807 674 aaPredicted RBP23.91■■□□□ 1.42
ME3-204ENST00000525957 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
ME3-204ENST00000525957 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
ME3-204ENST00000525957 E9PCH4 1651 aa23.89■■□□□ 1.42
ME3-204ENST00000525957 TMEM131LA2VDJ0 1609 aa23.89■■□□□ 1.42
ME3-204ENST00000525957 ITGAEP38570 1179 aa23.89■■□□□ 1.41
ME3-204ENST00000525957 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
ME3-204ENST00000525957 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.41
ME3-204ENST00000525957 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.41
ME3-204ENST00000525957 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
ME3-204ENST00000525957 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
ME3-204ENST00000525957 IQGAP3Q86VI3 1631 aa23.85■■□□□ 1.41
ME3-204ENST00000525957 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
ME3-204ENST00000525957 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
ME3-204ENST00000525957 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
ME3-204ENST00000525957 MSH6P52701 1360 aa23.82■■□□□ 1.4
ME3-204ENST00000525957 CHD2O14647 1828 aaKnown RBP23.81■■□□□ 1.4
ME3-204ENST00000525957 NUP155O75694 1391 aa23.78■■□□□ 1.4
ME3-204ENST00000525957 HDGFP51858 240 aaKnown RBP23.77■■□□□ 1.4
ME3-204ENST00000525957 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
ME3-204ENST00000525957 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
ME3-204ENST00000525957 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
ME3-204ENST00000525957 RGS17Q9UGC6 210 aaPredicted RBP23.74■■□□□ 1.39
ME3-204ENST00000525957 ADAMTS13Q76LX8 1427 aa23.74■■□□□ 1.39
ME3-204ENST00000525957 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
ME3-204ENST00000525957 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
ME3-204ENST00000525957 SPHKAPQ2M3C7 1700 aa23.71■■□□□ 1.39
ME3-204ENST00000525957 TBX22Q9Y458 520 aa23.71■■□□□ 1.39
ME3-204ENST00000525957 TRPM2O94759 1503 aa23.69■■□□□ 1.38
ME3-204ENST00000525957 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
ME3-204ENST00000525957 COL16A1Q07092 1604 aaPredicted RBP23.65■■□□□ 1.38
ME3-204ENST00000525957 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
ME3-204ENST00000525957 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
ME3-204ENST00000525957 PTPRUQ92729 1446 aa23.63■■□□□ 1.37
ME3-204ENST00000525957 PIK3R4Q99570 1358 aa23.63■■□□□ 1.37
ME3-204ENST00000525957 JCADQ9P266 1359 aa23.63■■□□□ 1.37
ME3-204ENST00000525957 NRXN3Q9Y4C0 1643 aa23.62■■□□□ 1.37
ME3-204ENST00000525957 NCOA3Q9Y6Q9 1424 aa23.61■■□□□ 1.37
ME3-204ENST00000525957 ATF3P18847 181 aa23.61■■□□□ 1.37
ME3-204ENST00000525957 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
ME3-204ENST00000525957 CLTCL1P53675 1640 aa23.61■■□□□ 1.37
ME3-204ENST00000525957 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
ME3-204ENST00000525957 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
ME3-204ENST00000525957 CADPS2Q86UW7 1296 aa23.58■■□□□ 1.37
ME3-204ENST00000525957 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
ME3-204ENST00000525957 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
ME3-204ENST00000525957 AHDC1Q5TGY3 1603 aaPredicted RBP23.56■■□□□ 1.36
ME3-204ENST00000525957 LRP6O75581 1613 aa23.55■■□□□ 1.36
ME3-204ENST00000525957 RRBP1Q9P2E9 1410 aaKnown RBP23.55■■□□□ 1.36
ME3-204ENST00000525957 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
ME3-204ENST00000525957 NAIPQ13075 1403 aa23.53■■□□□ 1.36
ME3-204ENST00000525957 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
ME3-204ENST00000525957 METP08581 1390 aa23.52■■□□□ 1.36
ME3-204ENST00000525957 KIF1BO60333 1816 aa23.52■■□□□ 1.36
ME3-204ENST00000525957 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
ME3-204ENST00000525957 BRINP3Q76B58 766 aa23.5■■□□□ 1.35
ME3-204ENST00000525957 DCCP43146 1447 aa23.5■■□□□ 1.35
ME3-204ENST00000525957 ASXL1Q8IXJ9 1541 aa23.49■■□□□ 1.35
ME3-204ENST00000525957 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
ME3-204ENST00000525957 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
ME3-204ENST00000525957 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
ME3-204ENST00000525957 MST1RQ04912 1400 aa23.46■■□□□ 1.35
ME3-204ENST00000525957 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
ME3-204ENST00000525957 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
ME3-204ENST00000525957 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
ME3-204ENST00000525957 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
ME3-204ENST00000525957 NHSL1Q5SYE7 1610 aa23.43■■□□□ 1.34
ME3-204ENST00000525957 HFM1A2PYH4 1435 aa23.42■■□□□ 1.34
ME3-204ENST00000525957 DDX17Q92841 729 aaKnown RBP23.4■■□□□ 1.34
ME3-204ENST00000525957 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
ME3-204ENST00000525957 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
ME3-204ENST00000525957 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
ME3-204ENST00000525957 PPLO60437 1756 aa23.35■■□□□ 1.33
ME3-204ENST00000525957 PTCH1Q13635 1447 aa23.34■■□□□ 1.33
ME3-204ENST00000525957 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
ME3-204ENST00000525957 FOXD1Q16676 465 aa23.34■■□□□ 1.33
ME3-204ENST00000525957 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
ME3-204ENST00000525957 AFF2P51816 1311 aa23.32■■□□□ 1.32
ME3-204ENST00000525957 C1orf167Q5SNV9 1468 aa23.31■■□□□ 1.32
ME3-204ENST00000525957 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
ME3-204ENST00000525957 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
ME3-204ENST00000525957 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
ME3-204ENST00000525957 RXRBP28702 533 aa23.27■■□□□ 1.32
ME3-204ENST00000525957 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
ME3-204ENST00000525957 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
ME3-204ENST00000525957 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
ME3-204ENST00000525957 ADAMTS2O95450 1211 aa23.23■■□□□ 1.31
ME3-204ENST00000525957 RGL3Q3MIN7 710 aa23.23■■□□□ 1.31
ME3-204ENST00000525957 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
ME3-204ENST00000525957 LAMC1P11047 1609 aa23.22■■□□□ 1.31
ME3-204ENST00000525957 ADGRF5Q8IZF2 1346 aa23.21■■□□□ 1.31
ME3-204ENST00000525957 UPF1Q92900 1129 aaKnown RBP eCLIP23.2■■□□□ 1.3
ME3-204ENST00000525957 STK26Q9P289 416 aa23.2■■□□□ 1.3
ME3-204ENST00000525957 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
ME3-204ENST00000525957 CDC42BPGQ6DT37 1551 aa23.19■■□□□ 1.3
ME3-204ENST00000525957 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
ME3-204ENST00000525957 RGS12O14924 1447 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms