RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 CHGAP10645 457 aaKnown RBP37.29■■■■□ 3.56
ROM1-203ENST00000525947 SPHKAPQ2M3C7 1700 aa37.28■■■■□ 3.56
ROM1-203ENST00000525947 BCANQ96GW7 911 aa37.28■■■■□ 3.56
ROM1-203ENST00000525947 HSPA1LP34931 641 aa37.27■■■■□ 3.56
ROM1-203ENST00000525947 RIMS2Q9UQ26 1411 aa37.24■■■■□ 3.55
ROM1-203ENST00000525947 CHD2O14647 1828 aaKnown RBP37.24■■■■□ 3.55
ROM1-203ENST00000525947 ZFYVE9O95405 1425 aa37.22■■■■□ 3.55
ROM1-203ENST00000525947 PPP1R15AO75807 674 aaPredicted RBP37.19■■■■□ 3.54
ROM1-203ENST00000525947 NUTM2DQ5VT03 806 aaPredicted RBP37.16■■■■□ 3.54
ROM1-203ENST00000525947 ILDR2Q71H61 639 aa37.16■■■■□ 3.54
ROM1-203ENST00000525947 KCNA6P17658 529 aa37.15■■■■□ 3.54
ROM1-203ENST00000525947 NWD1Q149M9 1564 aa37.14■■■■□ 3.54
ROM1-203ENST00000525947 HDGFP51858 240 aaKnown RBP37.13■■■■□ 3.53
ROM1-203ENST00000525947 RBM33Q96EV2 1170 aaKnown RBP37.13■■■■□ 3.53
ROM1-203ENST00000525947 PLEKHG1Q9ULL1 1385 aa37.13■■■■□ 3.53
ROM1-203ENST00000525947 NAIPQ13075 1403 aa37.12■■■■□ 3.53
ROM1-203ENST00000525947 PROSER2Q86WR7 435 aaPredicted RBP37.1■■■■□ 3.53
ROM1-203ENST00000525947 TMEM94Q12767 1356 aa37.09■■■■□ 3.53
ROM1-203ENST00000525947 KIF1BO60333 1816 aa37.09■■■■□ 3.53
ROM1-203ENST00000525947 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.06■■■■□ 3.52
ROM1-203ENST00000525947 MED1Q15648 1581 aaPredicted RBP37.04■■■■□ 3.52
ROM1-203ENST00000525947 CLTCL1P53675 1640 aa37.03■■■■□ 3.52
ROM1-203ENST00000525947 NKTRP30414 1462 aaKnown RBP37.03■■■■□ 3.52
ROM1-203ENST00000525947 TRIM52Q96A61 297 aa36.99■■■■□ 3.51
ROM1-203ENST00000525947 ROBO1Q9Y6N7 1651 aa36.97■■■■□ 3.51
ROM1-203ENST00000525947 DIP2AQ14689 1571 aa36.97■■■■□ 3.51
ROM1-203ENST00000525947 ADAMTS13Q76LX8 1427 aa36.97■■■■□ 3.51
ROM1-203ENST00000525947 TBX22Q9Y458 520 aa36.97■■■■□ 3.51
ROM1-203ENST00000525947 HFM1A2PYH4 1435 aa36.95■■■■□ 3.51
ROM1-203ENST00000525947 ZNF326Q5BKZ1 582 aaKnown RBP36.94■■■■□ 3.5
ROM1-203ENST00000525947 TRPM2O94759 1503 aa36.93■■■■□ 3.5
ROM1-203ENST00000525947 NRXN3Q9Y4C0 1643 aa36.92■■■■□ 3.5
ROM1-203ENST00000525947 MSH6P52701 1360 aa36.89■■■■□ 3.5
ROM1-203ENST00000525947 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.86■■■■□ 3.49
ROM1-203ENST00000525947 FAM135BQ49AJ0 1406 aa36.85■■■■□ 3.49
ROM1-203ENST00000525947 NEXMIFQ5QGS0 1516 aa36.84■■■■□ 3.49
ROM1-203ENST00000525947 SETBP1Q9Y6X0 1596 aa36.82■■■■□ 3.48
ROM1-203ENST00000525947 C14orf37Q86TY3 774 aa36.81■■■■□ 3.48
ROM1-203ENST00000525947 SLC4A1APQ9BWU0 796 aaKnown RBP36.81■■■■□ 3.48
ROM1-203ENST00000525947 PHLPP1O60346 1717 aa36.81■■■■□ 3.48
ROM1-203ENST00000525947 PTPRUQ92729 1446 aa36.8■■■■□ 3.48
ROM1-203ENST00000525947 PIK3R4Q99570 1358 aa36.79■■■■□ 3.48
ROM1-203ENST00000525947 SOCS7O14512 581 aa36.78■■■■□ 3.48
ROM1-203ENST00000525947 XRN1Q8IZH2 1706 aaKnown RBP36.77■■■■□ 3.48
ROM1-203ENST00000525947 AMOTL2Q9Y2J4 779 aa36.77■■■■□ 3.48
ROM1-203ENST00000525947 SLAIN2Q9P270 581 aa36.75■■■■□ 3.47
ROM1-203ENST00000525947 PPLO60437 1756 aa36.75■■■■□ 3.47
ROM1-203ENST00000525947 PHF23Q9BUL5 403 aaPredicted RBP36.74■■■■□ 3.47
ROM1-203ENST00000525947 FOXD1Q16676 465 aa36.72■■■■□ 3.47
ROM1-203ENST00000525947 NCOA3Q9Y6Q9 1424 aa36.7■■■■□ 3.47
ROM1-203ENST00000525947 SETD1AO15047 1707 aaKnown RBP36.68■■■■□ 3.46
ROM1-203ENST00000525947 METP08581 1390 aa36.67■■■■□ 3.46
ROM1-203ENST00000525947 ATF3P18847 181 aa36.63■■■■□ 3.45
ROM1-203ENST00000525947 C19orf44Q9H6X5 657 aa36.63■■■■□ 3.45
ROM1-203ENST00000525947 CADPS2Q86UW7 1296 aa36.6■■■■□ 3.45
ROM1-203ENST00000525947 NALCNQ8IZF0 1738 aa36.59■■■■□ 3.45
ROM1-203ENST00000525947 COL16A1Q07092 1604 aaPredicted RBP36.58■■■■□ 3.45
ROM1-203ENST00000525947 MPHOSPH9Q99550 1183 aa36.57■■■■□ 3.44
ROM1-203ENST00000525947 VGFO15240 615 aaPredicted RBP36.56■■■■□ 3.44
ROM1-203ENST00000525947 IFT172Q9UG01 1749 aa36.56■■■■□ 3.44
ROM1-203ENST00000525947 RPGRIP1LQ68CZ1 1315 aa36.52■■■■□ 3.44
ROM1-203ENST00000525947 CCDC144AA2RUR9 1427 aa36.51■■■■□ 3.43
ROM1-203ENST00000525947 SETD5Q9C0A6 1442 aa36.49■■■■□ 3.43
ROM1-203ENST00000525947 AHDC1Q5TGY3 1603 aaPredicted RBP36.48■■■■□ 3.43
ROM1-203ENST00000525947 RGL3Q3MIN7 710 aa36.47■■■■□ 3.43
ROM1-203ENST00000525947 RGS17Q9UGC6 210 aaPredicted RBP36.47■■■■□ 3.43
ROM1-203ENST00000525947 DCCP43146 1447 aa36.46■■■■□ 3.43
ROM1-203ENST00000525947 JCADQ9P266 1359 aa36.44■■■■□ 3.42
ROM1-203ENST00000525947 ADGRL3Q9HAR2 1447 aa36.42■■■■□ 3.42
ROM1-203ENST00000525947 SHPRHQ149N8 1683 aa36.42■■■■□ 3.42
ROM1-203ENST00000525947 BRINP3Q76B58 766 aa36.42■■■■□ 3.42
ROM1-203ENST00000525947 MST1RQ04912 1400 aa36.42■■■■□ 3.42
ROM1-203ENST00000525947 NHSL1Q5SYE7 1610 aa36.41■■■■□ 3.42
ROM1-203ENST00000525947 ASXL1Q8IXJ9 1541 aa36.39■■■■□ 3.42
ROM1-203ENST00000525947 SPATA31E1Q6ZUB1 1445 aa36.39■■■■□ 3.42
ROM1-203ENST00000525947 ADGRF5Q8IZF2 1346 aa36.38■■■■□ 3.41
ROM1-203ENST00000525947 ROBO2Q9HCK4 1378 aa36.37■■■■□ 3.41
ROM1-203ENST00000525947 RAB3GAP2Q9H2M9 1393 aa36.36■■■■□ 3.41
ROM1-203ENST00000525947 PTCH1Q13635 1447 aa36.35■■■■□ 3.41
ROM1-203ENST00000525947 ACIN1Q9UKV3 1341 aaKnown RBP36.3■■■■□ 3.4
ROM1-203ENST00000525947 POTEAQ6S8J7 498 aa36.29■■■■□ 3.4
ROM1-203ENST00000525947 LRP6O75581 1613 aa36.29■■■■□ 3.4
ROM1-203ENST00000525947 ANKRD30BQ9BXX2 1392 aa36.27■■■■□ 3.4
ROM1-203ENST00000525947 DDX17Q92841 729 aaKnown RBP36.27■■■■□ 3.4
ROM1-203ENST00000525947 KNDC1Q76NI1 1749 aa36.25■■■■□ 3.39
ROM1-203ENST00000525947 STK26Q9P289 416 aa36.25■■■■□ 3.39
ROM1-203ENST00000525947 PRAG1Q86YV5 1406 aa36.25■■■■□ 3.39
ROM1-203ENST00000525947 SPATA31A6Q5VVP1 1343 aa36.24■■■■□ 3.39
ROM1-203ENST00000525947 C1orf167Q5SNV9 1468 aa36.24■■■■□ 3.39
ROM1-203ENST00000525947 MEX3CQ5U5Q3 659 aaKnown RBP36.22■■■■□ 3.39
ROM1-203ENST00000525947 TMEM132EQ6IEE7 984 aa36.21■■■■□ 3.39
ROM1-203ENST00000525947 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
ROM1-203ENST00000525947 NUTM2BA6NNL0 878 aaPredicted RBP36.19■■■■□ 3.38
ROM1-203ENST00000525947 NUTM2EB1AL46 878 aaPredicted RBP36.19■■■■□ 3.38
ROM1-203ENST00000525947 NUTM2AQ8IVF1 878 aaPredicted RBP36.19■■■■□ 3.38
ROM1-203ENST00000525947 ORAI2Q96SN7 254 aa36.16■■■■□ 3.38
ROM1-203ENST00000525947 WAPLQ7Z5K2 1190 aa36.15■■■■□ 3.38
ROM1-203ENST00000525947 LAMC1P11047 1609 aa36.15■■■■□ 3.38
ROM1-203ENST00000525947 RGPD8O14715 1765 aaPredicted RBP36.15■■■■□ 3.38
ROM1-203ENST00000525947 CDC42BPGQ6DT37 1551 aa36.14■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms