RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FOXD1Q16676 465 aa7.92□□□□□ -1.14
HMGB1P40-201ENST00000525121 CLTCL1P53675 1640 aa7.92□□□□□ -1.14
HMGB1P40-201ENST00000525121 LTKP29376 864 aa7.91□□□□□ -1.14
HMGB1P40-201ENST00000525121 PLEKHG1Q9ULL1 1385 aa7.91□□□□□ -1.14
HMGB1P40-201ENST00000525121 ZFYVE9O95405 1425 aa7.91□□□□□ -1.14
HMGB1P40-201ENST00000525121 RPGRIP1LQ68CZ1 1315 aa7.9□□□□□ -1.14
HMGB1P40-201ENST00000525121 ZNF335Q9H4Z2 1342 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P40-201ENST00000525121 CPS1P31327 1500 aa7.89□□□□□ -1.15
HMGB1P40-201ENST00000525121 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
HMGB1P40-201ENST00000525121 KIF1BO60333 1816 aa7.89□□□□□ -1.15
HMGB1P40-201ENST00000525121 VGFO15240 615 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P40-201ENST00000525121 NUTM2DQ5VT03 806 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P40-201ENST00000525121 SLC26A8Q96RN1 970 aa7.88□□□□□ -1.15
HMGB1P40-201ENST00000525121 DIP2AQ14689 1571 aa7.88□□□□□ -1.15
HMGB1P40-201ENST00000525121 IQSEC2Q5JU85 1478 aa7.87□□□□□ -1.15
HMGB1P40-201ENST00000525121 ANKRD30BQ9BXX2 1392 aa7.87□□□□□ -1.15
HMGB1P40-201ENST00000525121 RGL3Q3MIN7 710 aa7.87□□□□□ -1.15
HMGB1P40-201ENST00000525121 SENP3Q9H4L4 574 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P40-201ENST00000525121 NEXMIFQ5QGS0 1516 aa7.87□□□□□ -1.15
HMGB1P40-201ENST00000525121 LTBP4Q8N2S1 1624 aa7.86□□□□□ -1.15
HMGB1P40-201ENST00000525121 TBX22Q9Y458 520 aa7.86□□□□□ -1.15
HMGB1P40-201ENST00000525121 MYO5BQ9ULV0 1848 aa7.86□□□□□ -1.15
HMGB1P40-201ENST00000525121 PIK3R4Q99570 1358 aa7.85□□□□□ -1.15
HMGB1P40-201ENST00000525121 KCNA6P17658 529 aa7.85□□□□□ -1.15
HMGB1P40-201ENST00000525121 NKTRP30414 1462 aaKnown RBP7.85□□□□□ -1.15
HMGB1P40-201ENST00000525121 SPATA31E1Q6ZUB1 1445 aa7.85□□□□□ -1.15
HMGB1P40-201ENST00000525121 SETBP1Q9Y6X0 1596 aa7.84□□□□□ -1.15
HMGB1P40-201ENST00000525121 FBXO41Q8TF61 875 aa7.84□□□□□ -1.15
HMGB1P40-201ENST00000525121 PROSER2Q86WR7 435 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P40-201ENST00000525121 ADAMTS13Q76LX8 1427 aa7.83□□□□□ -1.16
HMGB1P40-201ENST00000525121 MYOM2P54296 1465 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 UBAP1LF5GYI3 381 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 TOM1O60784 492 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 PCGF6Q9BYE7 350 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 LRRC7Q96NW7 1537 aa7.82□□□□□ -1.16
HMGB1P40-201ENST00000525121 AMOTL2Q9Y2J4 779 aa7.81□□□□□ -1.16
HMGB1P40-201ENST00000525121 PPLO60437 1756 aa7.81□□□□□ -1.16
HMGB1P40-201ENST00000525121 MSH6P52701 1360 aa7.81□□□□□ -1.16
HMGB1P40-201ENST00000525121 TMEM94Q12767 1356 aa7.81□□□□□ -1.16
HMGB1P40-201ENST00000525121 DHX57Q6P158 1386 aaKnown RBP7.81□□□□□ -1.16
HMGB1P40-201ENST00000525121 ADGRF5Q8IZF2 1346 aa7.8□□□□□ -1.16
HMGB1P40-201ENST00000525121 SCAF1Q9H7N4 1312 aaKnown RBP7.8□□□□□ -1.16
HMGB1P40-201ENST00000525121 DCAF11Q8TEB1 546 aa7.8□□□□□ -1.16
HMGB1P40-201ENST00000525121 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
HMGB1P40-201ENST00000525121 NRXN3Q9Y4C0 1643 aa7.8□□□□□ -1.16
HMGB1P40-201ENST00000525121 PIK3C2GO75747 1445 aa7.79□□□□□ -1.16
HMGB1P40-201ENST00000525121 LAMC1P11047 1609 aa7.79□□□□□ -1.16
HMGB1P40-201ENST00000525121 ALKQ9UM73 1620 aa7.79□□□□□ -1.16
HMGB1P40-201ENST00000525121 NEUROD1Q13562 356 aa7.79□□□□□ -1.16
HMGB1P40-201ENST00000525121 METP08581 1390 aa7.79□□□□□ -1.16
HMGB1P40-201ENST00000525121 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
HMGB1P40-201ENST00000525121 IFT172Q9UG01 1749 aa7.78□□□□□ -1.16
HMGB1P40-201ENST00000525121 ILDR1Q86SU0 546 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P40-201ENST00000525121 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
HMGB1P40-201ENST00000525121 STRCP1A6NGW2 1772 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 NRXN1Q9ULB1 1477 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 TONSLQ96HA7 1378 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 ATF3P18847 181 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 PIP4K2BP78356 416 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 CHD2O14647 1828 aaKnown RBP7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 XRN1Q8IZH2 1706 aaKnown RBP7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 PTPRUQ92729 1446 aa7.77□□□□□ -1.17
HMGB1P40-201ENST00000525121 LRPPRCP42704 1394 aaKnown RBP7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 CADPS2Q86UW7 1296 aa7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 C14orf93Q9H972 538 aaKnown RBP7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 STK26Q9P289 416 aa7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 PRAG1Q86YV5 1406 aa7.76□□□□□ -1.17
HMGB1P40-201ENST00000525121 CFAP70Q5T0N1 1121 aa7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 TMEM132EQ6IEE7 984 aa7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 SIN3AQ96ST3 1273 aa7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 C19orf44Q9H6X5 657 aa7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 DCCP43146 1447 aa7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 YTHDC2Q9H6S0 1430 aaKnown RBP7.75□□□□□ -1.17
HMGB1P40-201ENST00000525121 ABCC11Q96J66 1382 aa7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 CCER1Q8TC90 406 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 L3MBTL2Q969R5 705 aa7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 TECPR2O15040 1411 aa7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 ADGRL3Q9HAR2 1447 aa7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 SETD1AO15047 1707 aaKnown RBP7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 CLSPNQ9HAW4 1339 aa7.74□□□□□ -1.17
HMGB1P40-201ENST00000525121 ROBO2Q9HCK4 1378 aa7.73□□□□□ -1.17
HMGB1P40-201ENST00000525121 FAM135BQ49AJ0 1406 aa7.73□□□□□ -1.17
HMGB1P40-201ENST00000525121 POGKQ9P215 609 aa7.73□□□□□ -1.17
HMGB1P40-201ENST00000525121 ASXL1Q8IXJ9 1541 aa7.73□□□□□ -1.17
HMGB1P40-201ENST00000525121 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
HMGB1P40-201ENST00000525121 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
HMGB1P40-201ENST00000525121 SIRT1Q96EB6 747 aa7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 TRAK1Q9UPV9 953 aa7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 DLC1Q96QB1 1528 aa7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 ADGRB1O14514 1584 aa7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 XIRP1Q702N8 1843 aaKnown RBP7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 ROCK2O75116 1388 aaKnown RBP7.71□□□□□ -1.18
HMGB1P40-201ENST00000525121 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P40-201ENST00000525121 KIAA1210Q9ULL0 1709 aa7.7□□□□□ -1.18
HMGB1P40-201ENST00000525121 WAPLQ7Z5K2 1190 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms