RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 SCAF1Q9H7N4 1312 aaKnown RBP28.38■■■□□ 2.13
CTSB-206ENST00000524500 STRCP1A6NGW2 1772 aa28.37■■■□□ 2.13
CTSB-206ENST00000524500 ZFYVE9O95405 1425 aa28.37■■■□□ 2.13
CTSB-206ENST00000524500 PIP4K2BP78356 416 aa28.36■■■□□ 2.13
CTSB-206ENST00000524500 TRIM52Q96A61 297 aa28.36■■■□□ 2.13
CTSB-206ENST00000524500 PLEKHG1Q9ULL1 1385 aa28.34■■■□□ 2.13
CTSB-206ENST00000524500 KCNA6P17658 529 aa28.33■■■□□ 2.13
CTSB-206ENST00000524500 MYO5BQ9ULV0 1848 aa28.33■■■□□ 2.13
CTSB-206ENST00000524500 SPHKAPQ2M3C7 1700 aa28.29■■■□□ 2.12
CTSB-206ENST00000524500 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
CTSB-206ENST00000524500 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
CTSB-206ENST00000524500 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
CTSB-206ENST00000524500 PROSER2Q86WR7 435 aaPredicted RBP28.25■■■□□ 2.11
CTSB-206ENST00000524500 ZNF326Q5BKZ1 582 aaKnown RBP28.24■■■□□ 2.11
CTSB-206ENST00000524500 TBX22Q9Y458 520 aa28.24■■■□□ 2.11
CTSB-206ENST00000524500 TRPM2O94759 1503 aa28.22■■■□□ 2.11
CTSB-206ENST00000524500 TMEM94Q12767 1356 aa28.22■■■□□ 2.11
CTSB-206ENST00000524500 NKTRP30414 1462 aaKnown RBP28.21■■■□□ 2.11
CTSB-206ENST00000524500 HSPA1LP34931 641 aa28.2■■■□□ 2.1
CTSB-206ENST00000524500 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
CTSB-206ENST00000524500 NWD1Q149M9 1564 aa28.19■■■□□ 2.1
CTSB-206ENST00000524500 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
CTSB-206ENST00000524500 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
CTSB-206ENST00000524500 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
CTSB-206ENST00000524500 CLTCL1P53675 1640 aa28.15■■■□□ 2.1
CTSB-206ENST00000524500 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
CTSB-206ENST00000524500 PIK3R4Q99570 1358 aa28.14■■■□□ 2.1
CTSB-206ENST00000524500 RBM33Q96EV2 1170 aaKnown RBP28.14■■■□□ 2.1
CTSB-206ENST00000524500 XIRP1Q702N8 1843 aaKnown RBP28.13■■■□□ 2.09
CTSB-206ENST00000524500 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
CTSB-206ENST00000524500 MSH6P52701 1360 aa28.1■■■□□ 2.09
CTSB-206ENST00000524500 MPHOSPH9Q99550 1183 aa28.08■■■□□ 2.09
CTSB-206ENST00000524500 KIF1BO60333 1816 aa28.08■■■□□ 2.09
CTSB-206ENST00000524500 FOXD1Q16676 465 aa28.06■■■□□ 2.08
CTSB-206ENST00000524500 SETD5Q9C0A6 1442 aa28.06■■■□□ 2.08
CTSB-206ENST00000524500 NCOA3Q9Y6Q9 1424 aa28.05■■■□□ 2.08
CTSB-206ENST00000524500 SETBP1Q9Y6X0 1596 aa28.05■■■□□ 2.08
CTSB-206ENST00000524500 NEXMIFQ5QGS0 1516 aa28.04■■■□□ 2.08
CTSB-206ENST00000524500 VGFO15240 615 aaPredicted RBP28.04■■■□□ 2.08
CTSB-206ENST00000524500 C14orf37Q86TY3 774 aa28.04■■■□□ 2.08
CTSB-206ENST00000524500 AMOTL2Q9Y2J4 779 aa28.04■■■□□ 2.08
CTSB-206ENST00000524500 FAM135BQ49AJ0 1406 aa28.03■■■□□ 2.08
CTSB-206ENST00000524500 RPGRIP1LQ68CZ1 1315 aa28.03■■■□□ 2.08
CTSB-206ENST00000524500 CCDC144AA2RUR9 1427 aa28.01■■■□□ 2.07
CTSB-206ENST00000524500 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
CTSB-206ENST00000524500 PTPRUQ92729 1446 aa27.99■■■□□ 2.07
CTSB-206ENST00000524500 SLAIN2Q9P270 581 aa27.98■■■□□ 2.07
CTSB-206ENST00000524500 C19orf44Q9H6X5 657 aa27.96■■■□□ 2.07
CTSB-206ENST00000524500 METP08581 1390 aa27.96■■■□□ 2.07
CTSB-206ENST00000524500 ATF3P18847 181 aa27.94■■■□□ 2.06
CTSB-206ENST00000524500 CADPS2Q86UW7 1296 aa27.94■■■□□ 2.06
CTSB-206ENST00000524500 RAB3GAP2Q9H2M9 1393 aa27.94■■■□□ 2.06
CTSB-206ENST00000524500 ROBO1Q9Y6N7 1651 aa27.91■■■□□ 2.06
CTSB-206ENST00000524500 RGL3Q3MIN7 710 aa27.9■■■□□ 2.06
CTSB-206ENST00000524500 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.06
CTSB-206ENST00000524500 MED1Q15648 1581 aaPredicted RBP27.89■■■□□ 2.05
CTSB-206ENST00000524500 ILDR2Q71H61 639 aa27.87■■■□□ 2.05
CTSB-206ENST00000524500 PPLO60437 1756 aa27.86■■■□□ 2.05
CTSB-206ENST00000524500 SPATA31E1Q6ZUB1 1445 aa27.85■■■□□ 2.05
CTSB-206ENST00000524500 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.85■■■□□ 2.05
CTSB-206ENST00000524500 ANKRD30BQ9BXX2 1392 aa27.84■■■□□ 2.05
CTSB-206ENST00000524500 PHF23Q9BUL5 403 aaPredicted RBP27.83■■■□□ 2.05
CTSB-206ENST00000524500 DCCP43146 1447 aa27.83■■■□□ 2.05
CTSB-206ENST00000524500 HRCP23327 699 aa27.81■■■□□ 2.04
CTSB-206ENST00000524500 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
CTSB-206ENST00000524500 PTCH1Q13635 1447 aa27.77■■■□□ 2.04
CTSB-206ENST00000524500 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
CTSB-206ENST00000524500 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
CTSB-206ENST00000524500 PHLPP1O60346 1717 aa27.74■■■□□ 2.03
CTSB-206ENST00000524500 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
CTSB-206ENST00000524500 BRINP3Q76B58 766 aa27.72■■■□□ 2.03
CTSB-206ENST00000524500 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
CTSB-206ENST00000524500 IFT172Q9UG01 1749 aa27.71■■■□□ 2.03
CTSB-206ENST00000524500 JCADQ9P266 1359 aa27.71■■■□□ 2.03
CTSB-206ENST00000524500 MST1RQ04912 1400 aa27.7■■■□□ 2.03
CTSB-206ENST00000524500 PIK3C2GO75747 1445 aa27.69■■■□□ 2.02
CTSB-206ENST00000524500 SOCS7O14512 581 aa27.69■■■□□ 2.02
CTSB-206ENST00000524500 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
CTSB-206ENST00000524500 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
CTSB-206ENST00000524500 STK26Q9P289 416 aa27.66■■■□□ 2.02
CTSB-206ENST00000524500 COL16A1Q07092 1604 aaPredicted RBP27.65■■■□□ 2.02
CTSB-206ENST00000524500 LRPPRCP42704 1394 aaKnown RBP27.64■■■□□ 2.02
CTSB-206ENST00000524500 ASXL1Q8IXJ9 1541 aa27.64■■■□□ 2.02
CTSB-206ENST00000524500 TMEM132EQ6IEE7 984 aa27.63■■■□□ 2.01
CTSB-206ENST00000524500 MYOM2P54296 1465 aa27.63■■■□□ 2.01
CTSB-206ENST00000524500 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
CTSB-206ENST00000524500 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
CTSB-206ENST00000524500 TECPR2O15040 1411 aa27.6■■■□□ 2.01
CTSB-206ENST00000524500 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
CTSB-206ENST00000524500 NRXN1Q9ULB1 1477 aa27.59■■■□□ 2.01
CTSB-206ENST00000524500 SPATA31A6Q5VVP1 1343 aa27.59■■■□□ 2.01
CTSB-206ENST00000524500 YTHDC2Q9H6S0 1430 aaKnown RBP27.58■■■□□ 2
CTSB-206ENST00000524500 CFAP70Q5T0N1 1121 aa27.57■■■□□ 2
CTSB-206ENST00000524500 WAPLQ7Z5K2 1190 aa27.56■■■□□ 2
CTSB-206ENST00000524500 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
CTSB-206ENST00000524500 STAC3Q96MF2 364 aa27.55■■■□□ 2
CTSB-206ENST00000524500 LAMC1P11047 1609 aa27.54■■■□□ 2
CTSB-206ENST00000524500 DCAF11Q8TEB1 546 aa27.54■■■□□ 2
CTSB-206ENST00000524500 LRRC59Q96AG4 307 aaKnown RBP27.54■■■□□ 2
CTSB-206ENST00000524500 RGS17Q9UGC6 210 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms