RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
LDLRAD3-202ENST00000524419 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
LDLRAD3-202ENST00000524419 ADGRB3O60242 1522 aa18.69■□□□□ 0.58
LDLRAD3-202ENST00000524419 ABCC3O15438 1527 aa18.69■□□□□ 0.58
LDLRAD3-202ENST00000524419 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
LDLRAD3-202ENST00000524419 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
LDLRAD3-202ENST00000524419 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
LDLRAD3-202ENST00000524419 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
LDLRAD3-202ENST00000524419 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
LDLRAD3-202ENST00000524419 NPATQ14207 1427 aa18.66■□□□□ 0.58
LDLRAD3-202ENST00000524419 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
LDLRAD3-202ENST00000524419 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
LDLRAD3-202ENST00000524419 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
LDLRAD3-202ENST00000524419 PPLO60437 1756 aa18.65■□□□□ 0.58
LDLRAD3-202ENST00000524419 GGT6Q6P531 493 aa18.64■□□□□ 0.58
LDLRAD3-202ENST00000524419 NRXN1Q9ULB1 1477 aa18.64■□□□□ 0.57
LDLRAD3-202ENST00000524419 RAPGEF3O95398 923 aa18.64■□□□□ 0.57
LDLRAD3-202ENST00000524419 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
LDLRAD3-202ENST00000524419 SYNMO15061 1565 aa18.64■□□□□ 0.57
LDLRAD3-202ENST00000524419 PER1O15534 1290 aaPredicted RBP18.62■□□□□ 0.57
LDLRAD3-202ENST00000524419 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
LDLRAD3-202ENST00000524419 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
LDLRAD3-202ENST00000524419 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
LDLRAD3-202ENST00000524419 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
LDLRAD3-202ENST00000524419 PANK3Q9H999 370 aa18.61■□□□□ 0.57
LDLRAD3-202ENST00000524419 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
LDLRAD3-202ENST00000524419 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
LDLRAD3-202ENST00000524419 MYOM1P52179 1685 aa18.59■□□□□ 0.57
LDLRAD3-202ENST00000524419 ADGRF5Q8IZF2 1346 aa18.59■□□□□ 0.57
LDLRAD3-202ENST00000524419 MYO3AQ8NEV4 1616 aa18.59■□□□□ 0.57
LDLRAD3-202ENST00000524419 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
LDLRAD3-202ENST00000524419 NOS1P29475 1434 aa18.59■□□□□ 0.57
LDLRAD3-202ENST00000524419 PIK3C2BO00750 1634 aa18.58■□□□□ 0.57
LDLRAD3-202ENST00000524419 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.56
LDLRAD3-202ENST00000524419 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.56
LDLRAD3-202ENST00000524419 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
LDLRAD3-202ENST00000524419 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
LDLRAD3-202ENST00000524419 YEATS2Q9ULM3 1422 aa18.56■□□□□ 0.56
LDLRAD3-202ENST00000524419 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
LDLRAD3-202ENST00000524419 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
LDLRAD3-202ENST00000524419 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
LDLRAD3-202ENST00000524419 TSPOAP1O95153 1857 aa18.54■□□□□ 0.56
LDLRAD3-202ENST00000524419 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
LDLRAD3-202ENST00000524419 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
LDLRAD3-202ENST00000524419 ERVK-7P63135 1459 aa18.51■□□□□ 0.55
LDLRAD3-202ENST00000524419 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
LDLRAD3-202ENST00000524419 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
LDLRAD3-202ENST00000524419 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
LDLRAD3-202ENST00000524419 ASXL1Q8IXJ9 1541 aa18.5■□□□□ 0.55
LDLRAD3-202ENST00000524419 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
LDLRAD3-202ENST00000524419 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
LDLRAD3-202ENST00000524419 SBNO2Q9Y2G9 1366 aa18.49■□□□□ 0.55
LDLRAD3-202ENST00000524419 INSRP06213 1382 aa18.49■□□□□ 0.55
LDLRAD3-202ENST00000524419 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
LDLRAD3-202ENST00000524419 ADGRB1O14514 1584 aa18.48■□□□□ 0.55
LDLRAD3-202ENST00000524419 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
LDLRAD3-202ENST00000524419 RBM19Q9Y4C8 960 aaKnown RBP18.47■□□□□ 0.55
LDLRAD3-202ENST00000524419 REREQ9P2R6 1566 aa18.46■□□□□ 0.55
LDLRAD3-202ENST00000524419 C14orf93Q9H972 538 aaKnown RBP18.46■□□□□ 0.55
LDLRAD3-202ENST00000524419 MYO5BQ9ULV0 1848 aa18.45■□□□□ 0.54
LDLRAD3-202ENST00000524419 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
LDLRAD3-202ENST00000524419 NPC1L1Q9UHC9 1359 aa18.45■□□□□ 0.54
LDLRAD3-202ENST00000524419 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
LDLRAD3-202ENST00000524419 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
LDLRAD3-202ENST00000524419 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
LDLRAD3-202ENST00000524419 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
LDLRAD3-202ENST00000524419 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
LDLRAD3-202ENST00000524419 AGLP35573 1532 aa18.41■□□□□ 0.54
LDLRAD3-202ENST00000524419 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
LDLRAD3-202ENST00000524419 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
LDLRAD3-202ENST00000524419 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
LDLRAD3-202ENST00000524419 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
LDLRAD3-202ENST00000524419 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
LDLRAD3-202ENST00000524419 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
LDLRAD3-202ENST00000524419 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
LDLRAD3-202ENST00000524419 IDI1Q13907 227 aa18.38■□□□□ 0.53
LDLRAD3-202ENST00000524419 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
LDLRAD3-202ENST00000524419 CLTCQ00610 1675 aaKnown RBP18.37■□□□□ 0.53
LDLRAD3-202ENST00000524419 KDM4FA0A1W2PPD8 638 aa18.36■□□□□ 0.53
LDLRAD3-202ENST00000524419 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
LDLRAD3-202ENST00000524419 ARHGEF40Q8TER5 1519 aa18.35■□□□□ 0.53
LDLRAD3-202ENST00000524419 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
LDLRAD3-202ENST00000524419 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
LDLRAD3-202ENST00000524419 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
LDLRAD3-202ENST00000524419 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
LDLRAD3-202ENST00000524419 USP32Q8NFA0 1604 aa18.32■□□□□ 0.52
LDLRAD3-202ENST00000524419 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
LDLRAD3-202ENST00000524419 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
LDLRAD3-202ENST00000524419 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
LDLRAD3-202ENST00000524419 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
LDLRAD3-202ENST00000524419 SPATA31D1Q6ZQQ2 1576 aa18.29■□□□□ 0.52
LDLRAD3-202ENST00000524419 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
LDLRAD3-202ENST00000524419 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
LDLRAD3-202ENST00000524419 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
LDLRAD3-202ENST00000524419 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
LDLRAD3-202ENST00000524419 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
LDLRAD3-202ENST00000524419 RCAN3Q9UKA8 241 aa18.26■□□□□ 0.51
LDLRAD3-202ENST00000524419 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
LDLRAD3-202ENST00000524419 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
LDLRAD3-202ENST00000524419 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms