RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
LMO1-203ENST00000524379 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
LMO1-203ENST00000524379 LTKP29376 864 aa27.22■■□□□ 1.95
LMO1-203ENST00000524379 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
LMO1-203ENST00000524379 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
LMO1-203ENST00000524379 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
LMO1-203ENST00000524379 IFT172Q9UG01 1749 aa27.19■■□□□ 1.94
LMO1-203ENST00000524379 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
LMO1-203ENST00000524379 ZNF335Q9H4Z2 1342 aaPredicted RBP27.17■■□□□ 1.94
LMO1-203ENST00000524379 PPLO60437 1756 aa27.17■■□□□ 1.94
LMO1-203ENST00000524379 NUTM2DQ5VT03 806 aaPredicted RBP27.17■■□□□ 1.94
LMO1-203ENST00000524379 SCAF11Q99590 1463 aaKnown RBP27.17■■□□□ 1.94
LMO1-203ENST00000524379 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
LMO1-203ENST00000524379 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
LMO1-203ENST00000524379 TXNDC2Q86VQ3 553 aa27.15■■□□□ 1.94
LMO1-203ENST00000524379 IQSEC2Q5JU85 1478 aa27.14■■□□□ 1.94
LMO1-203ENST00000524379 ANKLE2Q86XL3 938 aa27.13■■□□□ 1.93
LMO1-203ENST00000524379 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
LMO1-203ENST00000524379 MED14O60244 1454 aa27.12■■□□□ 1.93
LMO1-203ENST00000524379 ADGRF5Q8IZF2 1346 aa27.09■■□□□ 1.93
LMO1-203ENST00000524379 L3MBTL2Q969R5 705 aa27.08■■□□□ 1.93
LMO1-203ENST00000524379 EID1Q9Y6B2 187 aa27.08■■□□□ 1.93
LMO1-203ENST00000524379 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
LMO1-203ENST00000524379 MYOM2P54296 1465 aa27.07■■□□□ 1.92
LMO1-203ENST00000524379 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.07■■□□□ 1.92
LMO1-203ENST00000524379 NRXN3Q9Y4C0 1643 aa27.07■■□□□ 1.92
LMO1-203ENST00000524379 PLEKHG1Q9ULL1 1385 aa27.07■■□□□ 1.92
LMO1-203ENST00000524379 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
LMO1-203ENST00000524379 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
LMO1-203ENST00000524379 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
LMO1-203ENST00000524379 DCAF11Q8TEB1 546 aa27.04■■□□□ 1.92
LMO1-203ENST00000524379 UBAP1LF5GYI3 381 aa27.03■■□□□ 1.92
LMO1-203ENST00000524379 PPP1R15AO75807 674 aaPredicted RBP27.03■■□□□ 1.92
LMO1-203ENST00000524379 ADAMTS13Q76LX8 1427 aa27.03■■□□□ 1.92
LMO1-203ENST00000524379 SETBP1Q9Y6X0 1596 aa27.03■■□□□ 1.92
LMO1-203ENST00000524379 VGFO15240 615 aaPredicted RBP27.01■■□□□ 1.91
LMO1-203ENST00000524379 HDGFP51858 240 aaKnown RBP27.01■■□□□ 1.91
LMO1-203ENST00000524379 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.91
LMO1-203ENST00000524379 PIK3C2GO75747 1445 aa27■■□□□ 1.91
LMO1-203ENST00000524379 TONSLQ96HA7 1378 aa26.98■■□□□ 1.91
LMO1-203ENST00000524379 SETD1AO15047 1707 aaKnown RBP26.97■■□□□ 1.91
LMO1-203ENST00000524379 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
LMO1-203ENST00000524379 SLC26A8Q96RN1 970 aa26.96■■□□□ 1.91
LMO1-203ENST00000524379 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
LMO1-203ENST00000524379 PRAG1Q86YV5 1406 aa26.94■■□□□ 1.9
LMO1-203ENST00000524379 ASXL1Q8IXJ9 1541 aa26.92■■□□□ 1.9
LMO1-203ENST00000524379 NBPF8Q3BBV2 869 aa26.91■■□□□ 1.9
LMO1-203ENST00000524379 STAC3Q96MF2 364 aa26.91■■□□□ 1.9
LMO1-203ENST00000524379 DIP2AQ14689 1571 aa26.91■■□□□ 1.9
LMO1-203ENST00000524379 BCANQ96GW7 911 aa26.9■■□□□ 1.9
LMO1-203ENST00000524379 TBX22Q9Y458 520 aa26.9■■□□□ 1.9
LMO1-203ENST00000524379 METP08581 1390 aa26.89■■□□□ 1.9
LMO1-203ENST00000524379 CFAP70Q5T0N1 1121 aa26.89■■□□□ 1.9
LMO1-203ENST00000524379 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
LMO1-203ENST00000524379 CPS1P31327 1500 aa26.87■■□□□ 1.89
LMO1-203ENST00000524379 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
LMO1-203ENST00000524379 PTPRUQ92729 1446 aa26.87■■□□□ 1.89
LMO1-203ENST00000524379 TOM1O60784 492 aa26.85■■□□□ 1.89
LMO1-203ENST00000524379 ADGRB1O14514 1584 aa26.84■■□□□ 1.89
LMO1-203ENST00000524379 STRCP1A6NGW2 1772 aa26.84■■□□□ 1.89
LMO1-203ENST00000524379 LAMC1P11047 1609 aa26.83■■□□□ 1.89
LMO1-203ENST00000524379 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.88
LMO1-203ENST00000524379 ILDR2Q71H61 639 aa26.82■■□□□ 1.88
LMO1-203ENST00000524379 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
LMO1-203ENST00000524379 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
LMO1-203ENST00000524379 NWD1Q149M9 1564 aa26.81■■□□□ 1.88
LMO1-203ENST00000524379 PIP4K2BP78356 416 aa26.81■■□□□ 1.88
LMO1-203ENST00000524379 TMEM132EQ6IEE7 984 aa26.81■■□□□ 1.88
LMO1-203ENST00000524379 NBPF1Q3BBV0 1214 aa26.8■■□□□ 1.88
LMO1-203ENST00000524379 PIK3R4Q99570 1358 aa26.8■■□□□ 1.88
LMO1-203ENST00000524379 CHD2O14647 1828 aaKnown RBP26.79■■□□□ 1.88
LMO1-203ENST00000524379 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
LMO1-203ENST00000524379 RALGAPBQ86X10 1494 aa26.75■■□□□ 1.87
LMO1-203ENST00000524379 KCNA6P17658 529 aa26.75■■□□□ 1.87
LMO1-203ENST00000524379 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
LMO1-203ENST00000524379 LRPPRCP42704 1394 aaKnown RBP26.73■■□□□ 1.87
LMO1-203ENST00000524379 HSPA1LP34931 641 aa26.73■■□□□ 1.87
LMO1-203ENST00000524379 AMOTL2Q9Y2J4 779 aa26.72■■□□□ 1.87
LMO1-203ENST00000524379 GPRASP1Q5JY77 1395 aa26.71■■□□□ 1.87
LMO1-203ENST00000524379 TECPR2O15040 1411 aa26.7■■□□□ 1.86
LMO1-203ENST00000524379 KNDC1Q76NI1 1749 aa26.69■■□□□ 1.86
LMO1-203ENST00000524379 ROBO2Q9HCK4 1378 aa26.69■■□□□ 1.86
LMO1-203ENST00000524379 STK26Q9P289 416 aa26.68■■□□□ 1.86
LMO1-203ENST00000524379 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
LMO1-203ENST00000524379 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
LMO1-203ENST00000524379 SOCS7O14512 581 aa26.67■■□□□ 1.86
LMO1-203ENST00000524379 ROCK2O75116 1388 aaKnown RBP26.67■■□□□ 1.86
LMO1-203ENST00000524379 LRRC7Q96NW7 1537 aa26.66■■□□□ 1.86
LMO1-203ENST00000524379 PTCH1Q13635 1447 aa26.65■■□□□ 1.86
LMO1-203ENST00000524379 PLEKHH1Q9ULM0 1364 aa26.63■■□□□ 1.85
LMO1-203ENST00000524379 RBM33Q96EV2 1170 aaKnown RBP26.63■■□□□ 1.85
LMO1-203ENST00000524379 DLC1Q96QB1 1528 aa26.63■■□□□ 1.85
LMO1-203ENST00000524379 TRAK1Q9UPV9 953 aa26.62■■□□□ 1.85
LMO1-203ENST00000524379 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
LMO1-203ENST00000524379 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
LMO1-203ENST00000524379 TMEM94Q12767 1356 aa26.58■■□□□ 1.85
LMO1-203ENST00000524379 WAPLQ7Z5K2 1190 aa26.58■■□□□ 1.85
LMO1-203ENST00000524379 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
LMO1-203ENST00000524379 FAM135BQ49AJ0 1406 aa26.57■■□□□ 1.84
LMO1-203ENST00000524379 SIRT1Q96EB6 747 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms