RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 FOXD1Q16676 465 aa23.78■■□□□ 1.4
TRAPPC9-214ENST00000523777 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
TRAPPC9-214ENST00000523777 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
TRAPPC9-214ENST00000523777 PPP1R15AO75807 674 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC9-214ENST00000523777 ZNF326Q5BKZ1 582 aaKnown RBP23.75■■□□□ 1.39
TRAPPC9-214ENST00000523777 RPGRIP1LQ68CZ1 1315 aa23.72■■□□□ 1.39
TRAPPC9-214ENST00000523777 PLEKHG1Q9ULL1 1385 aa23.7■■□□□ 1.38
TRAPPC9-214ENST00000523777 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
TRAPPC9-214ENST00000523777 BCANQ96GW7 911 aa23.68■■□□□ 1.38
TRAPPC9-214ENST00000523777 VGFO15240 615 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC9-214ENST00000523777 NEXMIFQ5QGS0 1516 aa23.64■■□□□ 1.37
TRAPPC9-214ENST00000523777 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC9-214ENST00000523777 SPATA31E1Q6ZUB1 1445 aa23.63■■□□□ 1.37
TRAPPC9-214ENST00000523777 CPS1P31327 1500 aa23.62■■□□□ 1.37
TRAPPC9-214ENST00000523777 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
TRAPPC9-214ENST00000523777 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
TRAPPC9-214ENST00000523777 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
TRAPPC9-214ENST00000523777 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC9-214ENST00000523777 CERKQ8TCT0 537 aa23.6■■□□□ 1.37
TRAPPC9-214ENST00000523777 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
TRAPPC9-214ENST00000523777 PPLO60437 1756 aa23.59■■□□□ 1.37
TRAPPC9-214ENST00000523777 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
TRAPPC9-214ENST00000523777 RGL3Q3MIN7 710 aa23.58■■□□□ 1.37
TRAPPC9-214ENST00000523777 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
TRAPPC9-214ENST00000523777 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
TRAPPC9-214ENST00000523777 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
TRAPPC9-214ENST00000523777 ADAMTS13Q76LX8 1427 aa23.54■■□□□ 1.36
TRAPPC9-214ENST00000523777 KCNA6P17658 529 aa23.54■■□□□ 1.36
TRAPPC9-214ENST00000523777 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
TRAPPC9-214ENST00000523777 PCGF6Q9BYE7 350 aa23.52■■□□□ 1.36
TRAPPC9-214ENST00000523777 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
TRAPPC9-214ENST00000523777 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
TRAPPC9-214ENST00000523777 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
TRAPPC9-214ENST00000523777 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
TRAPPC9-214ENST00000523777 STRCP1A6NGW2 1772 aa23.48■■□□□ 1.35
TRAPPC9-214ENST00000523777 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
TRAPPC9-214ENST00000523777 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC9-214ENST00000523777 MYOM2P54296 1465 aa23.47■■□□□ 1.35
TRAPPC9-214ENST00000523777 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
TRAPPC9-214ENST00000523777 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
TRAPPC9-214ENST00000523777 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
TRAPPC9-214ENST00000523777 FBXO41Q8TF61 875 aa23.43■■□□□ 1.34
TRAPPC9-214ENST00000523777 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
TRAPPC9-214ENST00000523777 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC9-214ENST00000523777 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
TRAPPC9-214ENST00000523777 NRXN1Q9ULB1 1477 aa23.41■■□□□ 1.34
TRAPPC9-214ENST00000523777 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
TRAPPC9-214ENST00000523777 LAMC1P11047 1609 aa23.39■■□□□ 1.33
TRAPPC9-214ENST00000523777 NCOA3Q9Y6Q9 1424 aa23.39■■□□□ 1.33
TRAPPC9-214ENST00000523777 SETD1AO15047 1707 aaKnown RBP23.39■■□□□ 1.33
TRAPPC9-214ENST00000523777 METP08581 1390 aa23.39■■□□□ 1.33
TRAPPC9-214ENST00000523777 TOM1O60784 492 aa23.36■■□□□ 1.33
TRAPPC9-214ENST00000523777 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-214ENST00000523777 KDM2AQ9Y2K7 1162 aa23.36■■□□□ 1.33
TRAPPC9-214ENST00000523777 TMEM94Q12767 1356 aa23.36■■□□□ 1.33
TRAPPC9-214ENST00000523777 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-214ENST00000523777 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
TRAPPC9-214ENST00000523777 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
TRAPPC9-214ENST00000523777 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
TRAPPC9-214ENST00000523777 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.32
TRAPPC9-214ENST00000523777 PRAG1Q86YV5 1406 aa23.33■■□□□ 1.32
TRAPPC9-214ENST00000523777 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
TRAPPC9-214ENST00000523777 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
TRAPPC9-214ENST00000523777 MSH6P52701 1360 aa23.3■■□□□ 1.32
TRAPPC9-214ENST00000523777 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
TRAPPC9-214ENST00000523777 LRPPRCP42704 1394 aaKnown RBP23.28■■□□□ 1.32
TRAPPC9-214ENST00000523777 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
TRAPPC9-214ENST00000523777 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
TRAPPC9-214ENST00000523777 ABCC11Q96J66 1382 aa23.27■■□□□ 1.32
TRAPPC9-214ENST00000523777 L3MBTL2Q969R5 705 aa23.27■■□□□ 1.32
TRAPPC9-214ENST00000523777 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
TRAPPC9-214ENST00000523777 TECPR2O15040 1411 aa23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 KNDC1Q76NI1 1749 aa23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
TRAPPC9-214ENST00000523777 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
TRAPPC9-214ENST00000523777 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
TRAPPC9-214ENST00000523777 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
TRAPPC9-214ENST00000523777 CADPS2Q86UW7 1296 aa23.22■■□□□ 1.31
TRAPPC9-214ENST00000523777 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
TRAPPC9-214ENST00000523777 DCCP43146 1447 aa23.22■■□□□ 1.31
TRAPPC9-214ENST00000523777 ATF3P18847 181 aa23.21■■□□□ 1.31
TRAPPC9-214ENST00000523777 STK26Q9P289 416 aa23.21■■□□□ 1.31
TRAPPC9-214ENST00000523777 ROBO2Q9HCK4 1378 aa23.21■■□□□ 1.31
TRAPPC9-214ENST00000523777 FAM135BQ49AJ0 1406 aa23.2■■□□□ 1.3
TRAPPC9-214ENST00000523777 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC9-214ENST00000523777 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
TRAPPC9-214ENST00000523777 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
TRAPPC9-214ENST00000523777 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
TRAPPC9-214ENST00000523777 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
TRAPPC9-214ENST00000523777 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC9-214ENST00000523777 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
TRAPPC9-214ENST00000523777 PIP4K2BP78356 416 aa23.16■■□□□ 1.3
TRAPPC9-214ENST00000523777 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
TRAPPC9-214ENST00000523777 NALCNQ8IZF0 1738 aa23.13■■□□□ 1.29
TRAPPC9-214ENST00000523777 POGKQ9P215 609 aa23.11■■□□□ 1.29
TRAPPC9-214ENST00000523777 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
TRAPPC9-214ENST00000523777 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms