RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.11
PABPC1-222ENST00000523555 EID1Q9Y6B2 187 aa14.33□□□□□ -0.12
PABPC1-222ENST00000523555 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-222ENST00000523555 FOXD1Q16676 465 aa14.31□□□□□ -0.12
PABPC1-222ENST00000523555 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
PABPC1-222ENST00000523555 ALKQ9UM73 1620 aa14.3□□□□□ -0.12
PABPC1-222ENST00000523555 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
PABPC1-222ENST00000523555 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
PABPC1-222ENST00000523555 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
PABPC1-222ENST00000523555 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
PABPC1-222ENST00000523555 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
PABPC1-222ENST00000523555 NEXMIFQ5QGS0 1516 aa14.28□□□□□ -0.12
PABPC1-222ENST00000523555 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
PABPC1-222ENST00000523555 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.12
PABPC1-222ENST00000523555 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
PABPC1-222ENST00000523555 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
PABPC1-222ENST00000523555 MPHOSPH9Q99550 1183 aa14.25□□□□□ -0.13
PABPC1-222ENST00000523555 PPLO60437 1756 aa14.24□□□□□ -0.13
PABPC1-222ENST00000523555 UBAP1LF5GYI3 381 aa14.24□□□□□ -0.13
PABPC1-222ENST00000523555 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-222ENST00000523555 BCANQ96GW7 911 aa14.23□□□□□ -0.13
PABPC1-222ENST00000523555 SETD1AO15047 1707 aaKnown RBP14.22□□□□□ -0.13
PABPC1-222ENST00000523555 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
PABPC1-222ENST00000523555 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
PABPC1-222ENST00000523555 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
PABPC1-222ENST00000523555 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
PABPC1-222ENST00000523555 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
PABPC1-222ENST00000523555 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.13
PABPC1-222ENST00000523555 KCNA6P17658 529 aa14.2□□□□□ -0.14
PABPC1-222ENST00000523555 PTPRUQ92729 1446 aa14.2□□□□□ -0.14
PABPC1-222ENST00000523555 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
PABPC1-222ENST00000523555 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
PABPC1-222ENST00000523555 TBX22Q9Y458 520 aa14.18□□□□□ -0.14
PABPC1-222ENST00000523555 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
PABPC1-222ENST00000523555 XRN1Q8IZH2 1706 aaKnown RBP14.18□□□□□ -0.14
PABPC1-222ENST00000523555 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
PABPC1-222ENST00000523555 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
PABPC1-222ENST00000523555 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
PABPC1-222ENST00000523555 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
PABPC1-222ENST00000523555 METP08581 1390 aa14.15□□□□□ -0.14
PABPC1-222ENST00000523555 TOM1O60784 492 aa14.14□□□□□ -0.15
PABPC1-222ENST00000523555 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-222ENST00000523555 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.12□□□□□ -0.15
PABPC1-222ENST00000523555 PIK3R4Q99570 1358 aa14.12□□□□□ -0.15
PABPC1-222ENST00000523555 RGL3Q3MIN7 710 aa14.12□□□□□ -0.15
PABPC1-222ENST00000523555 HSPA1LP34931 641 aa14.11□□□□□ -0.15
PABPC1-222ENST00000523555 AMOTL2Q9Y2J4 779 aa14.11□□□□□ -0.15
PABPC1-222ENST00000523555 ADGRF5Q8IZF2 1346 aa14.11□□□□□ -0.15
PABPC1-222ENST00000523555 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
PABPC1-222ENST00000523555 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
PABPC1-222ENST00000523555 NALCNQ8IZF0 1738 aa14.1□□□□□ -0.15
PABPC1-222ENST00000523555 RPGRIP1LQ68CZ1 1315 aa14.1□□□□□ -0.15
PABPC1-222ENST00000523555 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
PABPC1-222ENST00000523555 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-222ENST00000523555 HRCP23327 699 aa14.08□□□□□ -0.16
PABPC1-222ENST00000523555 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
PABPC1-222ENST00000523555 MSH6P52701 1360 aa14.07□□□□□ -0.16
PABPC1-222ENST00000523555 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
PABPC1-222ENST00000523555 NCOA3Q9Y6Q9 1424 aa14.04□□□□□ -0.16
PABPC1-222ENST00000523555 NRXN1Q9ULB1 1477 aa14.04□□□□□ -0.16
PABPC1-222ENST00000523555 ROBO2Q9HCK4 1378 aa14.03□□□□□ -0.16
PABPC1-222ENST00000523555 FAM135BQ49AJ0 1406 aa14.03□□□□□ -0.16
PABPC1-222ENST00000523555 MYOM2P54296 1465 aa14.03□□□□□ -0.16
PABPC1-222ENST00000523555 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
PABPC1-222ENST00000523555 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
PABPC1-222ENST00000523555 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
PABPC1-222ENST00000523555 PTCH1Q13635 1447 aa14.01□□□□□ -0.17
PABPC1-222ENST00000523555 PRAG1Q86YV5 1406 aa14.01□□□□□ -0.17
PABPC1-222ENST00000523555 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
PABPC1-222ENST00000523555 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
PABPC1-222ENST00000523555 SLAIN2Q9P270 581 aa14□□□□□ -0.17
PABPC1-222ENST00000523555 LAMC1P11047 1609 aa14□□□□□ -0.17
PABPC1-222ENST00000523555 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
PABPC1-222ENST00000523555 DHX57Q6P158 1386 aaKnown RBP13.99□□□□□ -0.17
PABPC1-222ENST00000523555 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
PABPC1-222ENST00000523555 MST1RQ04912 1400 aa13.98□□□□□ -0.17
PABPC1-222ENST00000523555 COL16A1Q07092 1604 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-222ENST00000523555 DCCP43146 1447 aa13.98□□□□□ -0.17
PABPC1-222ENST00000523555 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
PABPC1-222ENST00000523555 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 ATF3P18847 181 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 CADPS2Q86UW7 1296 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 STK26Q9P289 416 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 NHSL1Q5SYE7 1610 aa13.96□□□□□ -0.17
PABPC1-222ENST00000523555 TECPR2O15040 1411 aa13.96□□□□□ -0.18
PABPC1-222ENST00000523555 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.18
PABPC1-222ENST00000523555 ADGRB1O14514 1584 aa13.96□□□□□ -0.18
PABPC1-222ENST00000523555 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.18
PABPC1-222ENST00000523555 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-222ENST00000523555 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
PABPC1-222ENST00000523555 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
PABPC1-222ENST00000523555 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
PABPC1-222ENST00000523555 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
PABPC1-222ENST00000523555 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-222ENST00000523555 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
PABPC1-222ENST00000523555 ABCC11Q96J66 1382 aa13.93□□□□□ -0.18
PABPC1-222ENST00000523555 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
PABPC1-222ENST00000523555 FMN2Q9NZ56 1722 aa13.92□□□□□ -0.18
PABPC1-222ENST00000523555 C1orf167Q5SNV9 1468 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms