RNA–Protein interactions for RNA: ENST00000523466.5

GM2A-203, Transcript of GM2 ganglioside activator, humanhuman

TSL 3

Gene GM2A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-203ENST00000523466 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
GM2A-203ENST00000523466 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
GM2A-203ENST00000523466 MYO5BQ9ULV0 1848 aa12.2□□□□□ -0.46
GM2A-203ENST00000523466 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
GM2A-203ENST00000523466 NWD1Q149M9 1564 aa12.19□□□□□ -0.46
GM2A-203ENST00000523466 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
GM2A-203ENST00000523466 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
GM2A-203ENST00000523466 GCC2Q8IWJ2 1684 aa12.18□□□□□ -0.46
GM2A-203ENST00000523466 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
GM2A-203ENST00000523466 UNC13BO14795 1591 aa12.18□□□□□ -0.46
GM2A-203ENST00000523466 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
GM2A-203ENST00000523466 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
GM2A-203ENST00000523466 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
GM2A-203ENST00000523466 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
GM2A-203ENST00000523466 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
GM2A-203ENST00000523466 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
GM2A-203ENST00000523466 BCANQ96GW7 911 aa12.16□□□□□ -0.46
GM2A-203ENST00000523466 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
GM2A-203ENST00000523466 TBX22Q9Y458 520 aa12.15□□□□□ -0.46
GM2A-203ENST00000523466 E9PCH4 1651 aa12.15□□□□□ -0.46
GM2A-203ENST00000523466 MSH6P52701 1360 aa12.15□□□□□ -0.46
GM2A-203ENST00000523466 PPP1R15AO75807 674 aaPredicted RBP12.14□□□□□ -0.47
GM2A-203ENST00000523466 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
GM2A-203ENST00000523466 SLAIN2Q9P270 581 aa12.14□□□□□ -0.47
GM2A-203ENST00000523466 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
GM2A-203ENST00000523466 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
GM2A-203ENST00000523466 ADAMTS13Q76LX8 1427 aa12.11□□□□□ -0.47
GM2A-203ENST00000523466 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
GM2A-203ENST00000523466 NUP155O75694 1391 aa12.1□□□□□ -0.47
GM2A-203ENST00000523466 PIK3R4Q99570 1358 aa12.1□□□□□ -0.47
GM2A-203ENST00000523466 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
GM2A-203ENST00000523466 PHLPP1O60346 1717 aa12.09□□□□□ -0.47
GM2A-203ENST00000523466 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
GM2A-203ENST00000523466 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
GM2A-203ENST00000523466 JCADQ9P266 1359 aa12.07□□□□□ -0.48
GM2A-203ENST00000523466 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
GM2A-203ENST00000523466 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.06□□□□□ -0.48
GM2A-203ENST00000523466 ITGAEP38570 1179 aa12.06□□□□□ -0.48
GM2A-203ENST00000523466 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
GM2A-203ENST00000523466 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
GM2A-203ENST00000523466 C14orf37Q86TY3 774 aa12.05□□□□□ -0.48
GM2A-203ENST00000523466 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
GM2A-203ENST00000523466 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
GM2A-203ENST00000523466 TRPM2O94759 1503 aa12.05□□□□□ -0.48
GM2A-203ENST00000523466 SPHKAPQ2M3C7 1700 aa12.04□□□□□ -0.48
GM2A-203ENST00000523466 ATF3P18847 181 aa12.03□□□□□ -0.48
GM2A-203ENST00000523466 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
GM2A-203ENST00000523466 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
GM2A-203ENST00000523466 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
GM2A-203ENST00000523466 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
GM2A-203ENST00000523466 SPATA31A6Q5VVP1 1343 aa12.02□□□□□ -0.49
GM2A-203ENST00000523466 XRN1Q8IZH2 1706 aaKnown RBP12.01□□□□□ -0.49
GM2A-203ENST00000523466 DCCP43146 1447 aa12.01□□□□□ -0.49
GM2A-203ENST00000523466 ZNF326Q5BKZ1 582 aaKnown RBP12□□□□□ -0.49
GM2A-203ENST00000523466 BRINP3Q76B58 766 aa12□□□□□ -0.49
GM2A-203ENST00000523466 LRP6O75581 1613 aa12□□□□□ -0.49
GM2A-203ENST00000523466 SHPRHQ149N8 1683 aa12□□□□□ -0.49
GM2A-203ENST00000523466 METP08581 1390 aa11.99□□□□□ -0.49
GM2A-203ENST00000523466 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
GM2A-203ENST00000523466 RRBP1Q9P2E9 1410 aaKnown RBP11.98□□□□□ -0.49
GM2A-203ENST00000523466 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
GM2A-203ENST00000523466 NAIPQ13075 1403 aa11.97□□□□□ -0.49
GM2A-203ENST00000523466 MST1RQ04912 1400 aa11.96□□□□□ -0.49
GM2A-203ENST00000523466 KIF1BO60333 1816 aa11.96□□□□□ -0.49
GM2A-203ENST00000523466 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
GM2A-203ENST00000523466 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.49
GM2A-203ENST00000523466 SETD1AO15047 1707 aaKnown RBP11.96□□□□□ -0.49
GM2A-203ENST00000523466 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.5
GM2A-203ENST00000523466 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
GM2A-203ENST00000523466 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
GM2A-203ENST00000523466 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
GM2A-203ENST00000523466 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
GM2A-203ENST00000523466 NUTM2BA6NNL0 878 aaPredicted RBP11.92□□□□□ -0.5
GM2A-203ENST00000523466 NUTM2EB1AL46 878 aaPredicted RBP11.92□□□□□ -0.5
GM2A-203ENST00000523466 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
GM2A-203ENST00000523466 NUTM2AQ8IVF1 878 aaPredicted RBP11.92□□□□□ -0.5
GM2A-203ENST00000523466 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
GM2A-203ENST00000523466 HFM1A2PYH4 1435 aa11.92□□□□□ -0.5
GM2A-203ENST00000523466 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 RXRBP28702 533 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 PRAG1Q86YV5 1406 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
GM2A-203ENST00000523466 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
GM2A-203ENST00000523466 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
GM2A-203ENST00000523466 AFF2P51816 1311 aa11.89□□□□□ -0.51
GM2A-203ENST00000523466 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
GM2A-203ENST00000523466 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
GM2A-203ENST00000523466 LAMC1P11047 1609 aa11.89□□□□□ -0.51
GM2A-203ENST00000523466 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
GM2A-203ENST00000523466 PPLO60437 1756 aa11.88□□□□□ -0.51
GM2A-203ENST00000523466 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
GM2A-203ENST00000523466 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
GM2A-203ENST00000523466 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
GM2A-203ENST00000523466 C8orf37Q96NL8 207 aa11.85□□□□□ -0.51
GM2A-203ENST00000523466 QTRT2Q9H974 415 aaKnown RBP11.84□□□□□ -0.51
GM2A-203ENST00000523466 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.52
GM2A-203ENST00000523466 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
GM2A-203ENST00000523466 ADGRF5Q8IZF2 1346 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms