RNA–Protein interactions for RNA: ENST00000523315.1

EBF1-209, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-209ENST00000523315 SLIT1O75093 1534 aa20.75■□□□□ 0.91
EBF1-209ENST00000523315 PIP4K2BP78356 416 aa20.75■□□□□ 0.91
EBF1-209ENST00000523315 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
EBF1-209ENST00000523315 KDM5AP29375 1690 aaKnown RBP20.73■□□□□ 0.91
EBF1-209ENST00000523315 FOXD1Q16676 465 aa20.71■□□□□ 0.91
EBF1-209ENST00000523315 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.9
EBF1-209ENST00000523315 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
EBF1-209ENST00000523315 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
EBF1-209ENST00000523315 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
EBF1-209ENST00000523315 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
EBF1-209ENST00000523315 TOM1O60784 492 aa20.69■□□□□ 0.9
EBF1-209ENST00000523315 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
EBF1-209ENST00000523315 SLC26A8Q96RN1 970 aa20.67■□□□□ 0.9
EBF1-209ENST00000523315 HSPA1LP34931 641 aa20.66■□□□□ 0.9
EBF1-209ENST00000523315 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
EBF1-209ENST00000523315 BCANQ96GW7 911 aa20.65■□□□□ 0.9
EBF1-209ENST00000523315 KIF1BO60333 1816 aa20.64■□□□□ 0.9
EBF1-209ENST00000523315 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
EBF1-209ENST00000523315 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
EBF1-209ENST00000523315 ANKRD30BQ9BXX2 1392 aa20.61■□□□□ 0.89
EBF1-209ENST00000523315 HDGFP51858 240 aaKnown RBP20.61■□□□□ 0.89
EBF1-209ENST00000523315 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
EBF1-209ENST00000523315 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
EBF1-209ENST00000523315 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
EBF1-209ENST00000523315 DHX57Q6P158 1386 aaKnown RBP20.59■□□□□ 0.89
EBF1-209ENST00000523315 PPP1R15AO75807 674 aaPredicted RBP20.59■□□□□ 0.89
EBF1-209ENST00000523315 MYO5BQ9ULV0 1848 aa20.59■□□□□ 0.89
EBF1-209ENST00000523315 RIMS2Q9UQ26 1411 aa20.59■□□□□ 0.89
EBF1-209ENST00000523315 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
EBF1-209ENST00000523315 ZFYVE9O95405 1425 aa20.58■□□□□ 0.88
EBF1-209ENST00000523315 KCNA6P17658 529 aa20.56■□□□□ 0.88
EBF1-209ENST00000523315 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
EBF1-209ENST00000523315 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
EBF1-209ENST00000523315 PLEKHG1Q9ULL1 1385 aa20.53■□□□□ 0.88
EBF1-209ENST00000523315 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
EBF1-209ENST00000523315 SPATA31E1Q6ZUB1 1445 aa20.52■□□□□ 0.87
EBF1-209ENST00000523315 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
EBF1-209ENST00000523315 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
EBF1-209ENST00000523315 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
EBF1-209ENST00000523315 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
EBF1-209ENST00000523315 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
EBF1-209ENST00000523315 PPLO60437 1756 aa20.45■□□□□ 0.86
EBF1-209ENST00000523315 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
EBF1-209ENST00000523315 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
EBF1-209ENST00000523315 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
EBF1-209ENST00000523315 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
EBF1-209ENST00000523315 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
EBF1-209ENST00000523315 CCER1Q8TC90 406 aaPredicted RBP20.41■□□□□ 0.86
EBF1-209ENST00000523315 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
EBF1-209ENST00000523315 MYOM2P54296 1465 aa20.41■□□□□ 0.86
EBF1-209ENST00000523315 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
EBF1-209ENST00000523315 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
EBF1-209ENST00000523315 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
EBF1-209ENST00000523315 MSH6P52701 1360 aa20.39■□□□□ 0.85
EBF1-209ENST00000523315 STAC3Q96MF2 364 aa20.39■□□□□ 0.85
EBF1-209ENST00000523315 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
EBF1-209ENST00000523315 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
EBF1-209ENST00000523315 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
EBF1-209ENST00000523315 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
EBF1-209ENST00000523315 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
EBF1-209ENST00000523315 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
EBF1-209ENST00000523315 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
EBF1-209ENST00000523315 TONSLQ96HA7 1378 aa20.35■□□□□ 0.85
EBF1-209ENST00000523315 SOCS7O14512 581 aa20.35■□□□□ 0.85
EBF1-209ENST00000523315 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
EBF1-209ENST00000523315 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
EBF1-209ENST00000523315 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
EBF1-209ENST00000523315 NRXN3Q9Y4C0 1643 aa20.34■□□□□ 0.85
EBF1-209ENST00000523315 KDM2AQ9Y2K7 1162 aa20.33■□□□□ 0.85
EBF1-209ENST00000523315 PIK3C2GO75747 1445 aa20.33■□□□□ 0.84
EBF1-209ENST00000523315 PIK3R4Q99570 1358 aa20.33■□□□□ 0.84
EBF1-209ENST00000523315 ROBO1Q9Y6N7 1651 aa20.32■□□□□ 0.84
EBF1-209ENST00000523315 LAMC1P11047 1609 aa20.32■□□□□ 0.84
EBF1-209ENST00000523315 METP08581 1390 aa20.32■□□□□ 0.84
EBF1-209ENST00000523315 NRXN1Q9ULB1 1477 aa20.31■□□□□ 0.84
EBF1-209ENST00000523315 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
EBF1-209ENST00000523315 ATF3P18847 181 aa20.27■□□□□ 0.84
EBF1-209ENST00000523315 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
EBF1-209ENST00000523315 NCOA3Q9Y6Q9 1424 aa20.27■□□□□ 0.83
EBF1-209ENST00000523315 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
EBF1-209ENST00000523315 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
EBF1-209ENST00000523315 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
EBF1-209ENST00000523315 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
EBF1-209ENST00000523315 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
EBF1-209ENST00000523315 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
EBF1-209ENST00000523315 CFAP70Q5T0N1 1121 aa20.21■□□□□ 0.83
EBF1-209ENST00000523315 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
EBF1-209ENST00000523315 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
EBF1-209ENST00000523315 KIAA1210Q9ULL0 1709 aa20.19■□□□□ 0.82
EBF1-209ENST00000523315 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
EBF1-209ENST00000523315 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
EBF1-209ENST00000523315 LRPPRCP42704 1394 aaKnown RBP20.18■□□□□ 0.82
EBF1-209ENST00000523315 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
EBF1-209ENST00000523315 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
EBF1-209ENST00000523315 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
EBF1-209ENST00000523315 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
EBF1-209ENST00000523315 STK26Q9P289 416 aa20.15■□□□□ 0.82
EBF1-209ENST00000523315 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
EBF1-209ENST00000523315 JCADQ9P266 1359 aa20.15■□□□□ 0.82
EBF1-209ENST00000523315 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms