RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 NAIPQ13075 1403 aa16.47■□□□□ 0.23
PVT1-216ENST00000523068 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
PVT1-216ENST00000523068 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
PVT1-216ENST00000523068 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
PVT1-216ENST00000523068 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
PVT1-216ENST00000523068 BCANQ96GW7 911 aa16.46■□□□□ 0.23
PVT1-216ENST00000523068 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.45■□□□□ 0.22
PVT1-216ENST00000523068 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
PVT1-216ENST00000523068 SLC26A8Q96RN1 970 aa16.44■□□□□ 0.22
PVT1-216ENST00000523068 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
PVT1-216ENST00000523068 CHD2O14647 1828 aaKnown RBP16.43■□□□□ 0.22
PVT1-216ENST00000523068 KCNA6P17658 529 aa16.43■□□□□ 0.22
PVT1-216ENST00000523068 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
PVT1-216ENST00000523068 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
PVT1-216ENST00000523068 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
PVT1-216ENST00000523068 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
PVT1-216ENST00000523068 KIF1BO60333 1816 aa16.41■□□□□ 0.22
PVT1-216ENST00000523068 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
PVT1-216ENST00000523068 TRPM2O94759 1503 aa16.39■□□□□ 0.21
PVT1-216ENST00000523068 HSPA1LP34931 641 aa16.38■□□□□ 0.21
PVT1-216ENST00000523068 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
PVT1-216ENST00000523068 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
PVT1-216ENST00000523068 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
PVT1-216ENST00000523068 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
PVT1-216ENST00000523068 TMEM94Q12767 1356 aa16.37■□□□□ 0.21
PVT1-216ENST00000523068 PIK3R4Q99570 1358 aa16.35■□□□□ 0.21
PVT1-216ENST00000523068 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
PVT1-216ENST00000523068 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
PVT1-216ENST00000523068 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
PVT1-216ENST00000523068 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
PVT1-216ENST00000523068 MSH6P52701 1360 aa16.32■□□□□ 0.2
PVT1-216ENST00000523068 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
PVT1-216ENST00000523068 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
PVT1-216ENST00000523068 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
PVT1-216ENST00000523068 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
PVT1-216ENST00000523068 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
PVT1-216ENST00000523068 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
PVT1-216ENST00000523068 RBM33Q96EV2 1170 aaKnown RBP16.29■□□□□ 0.2
PVT1-216ENST00000523068 ROBO1Q9Y6N7 1651 aa16.29■□□□□ 0.2
PVT1-216ENST00000523068 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
PVT1-216ENST00000523068 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
PVT1-216ENST00000523068 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
PVT1-216ENST00000523068 C14orf37Q86TY3 774 aa16.25■□□□□ 0.19
PVT1-216ENST00000523068 PPLO60437 1756 aa16.25■□□□□ 0.19
PVT1-216ENST00000523068 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
PVT1-216ENST00000523068 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
PVT1-216ENST00000523068 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
PVT1-216ENST00000523068 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
PVT1-216ENST00000523068 ILDR2Q71H61 639 aa16.23■□□□□ 0.19
PVT1-216ENST00000523068 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
PVT1-216ENST00000523068 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
PVT1-216ENST00000523068 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
PVT1-216ENST00000523068 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
PVT1-216ENST00000523068 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
PVT1-216ENST00000523068 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
PVT1-216ENST00000523068 PHLPP1O60346 1717 aa16.21■□□□□ 0.19
PVT1-216ENST00000523068 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
PVT1-216ENST00000523068 ATF3P18847 181 aa16.2■□□□□ 0.18
PVT1-216ENST00000523068 FOXD1Q16676 465 aa16.2■□□□□ 0.18
PVT1-216ENST00000523068 METP08581 1390 aa16.19■□□□□ 0.18
PVT1-216ENST00000523068 DCCP43146 1447 aa16.18■□□□□ 0.18
PVT1-216ENST00000523068 IFT172Q9UG01 1749 aa16.17■□□□□ 0.18
PVT1-216ENST00000523068 SOCS7O14512 581 aa16.15■□□□□ 0.18
PVT1-216ENST00000523068 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
PVT1-216ENST00000523068 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
PVT1-216ENST00000523068 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
PVT1-216ENST00000523068 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
PVT1-216ENST00000523068 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
PVT1-216ENST00000523068 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
PVT1-216ENST00000523068 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
PVT1-216ENST00000523068 ADGRL3Q9HAR2 1447 aa16.12■□□□□ 0.17
PVT1-216ENST00000523068 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
PVT1-216ENST00000523068 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
PVT1-216ENST00000523068 JCADQ9P266 1359 aa16.1■□□□□ 0.17
PVT1-216ENST00000523068 MST1RQ04912 1400 aa16.09■□□□□ 0.17
PVT1-216ENST00000523068 ASXL1Q8IXJ9 1541 aa16.08■□□□□ 0.16
PVT1-216ENST00000523068 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
PVT1-216ENST00000523068 SHPRHQ149N8 1683 aa16.08■□□□□ 0.16
PVT1-216ENST00000523068 BRINP3Q76B58 766 aa16.07■□□□□ 0.16
PVT1-216ENST00000523068 ADGRF5Q8IZF2 1346 aa16.07■□□□□ 0.16
PVT1-216ENST00000523068 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
PVT1-216ENST00000523068 KNDC1Q76NI1 1749 aa16.06■□□□□ 0.16
PVT1-216ENST00000523068 HRCP23327 699 aa16.06■□□□□ 0.16
PVT1-216ENST00000523068 LAMC1P11047 1609 aa16.05■□□□□ 0.16
PVT1-216ENST00000523068 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
PVT1-216ENST00000523068 MYOM2P54296 1465 aa16.03■□□□□ 0.16
PVT1-216ENST00000523068 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
PVT1-216ENST00000523068 TECPR2O15040 1411 aa16.02■□□□□ 0.16
PVT1-216ENST00000523068 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.15
PVT1-216ENST00000523068 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
PVT1-216ENST00000523068 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
PVT1-216ENST00000523068 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
PVT1-216ENST00000523068 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
PVT1-216ENST00000523068 ABCC11Q96J66 1382 aa16■□□□□ 0.15
PVT1-216ENST00000523068 STK26Q9P289 416 aa15.99■□□□□ 0.15
PVT1-216ENST00000523068 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
PVT1-216ENST00000523068 LRRC59Q96AG4 307 aaKnown RBP15.98■□□□□ 0.15
PVT1-216ENST00000523068 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
PVT1-216ENST00000523068 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
PVT1-216ENST00000523068 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms