RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 BCANQ96GW7 911 aa28.26■■■□□ 2.11
SPIDR-220ENST00000522900 NUTM2DQ5VT03 806 aaPredicted RBP28.24■■■□□ 2.11
SPIDR-220ENST00000522900 MYO5BQ9ULV0 1848 aa28.22■■■□□ 2.11
SPIDR-220ENST00000522900 HFM1A2PYH4 1435 aa28.21■■■□□ 2.11
SPIDR-220ENST00000522900 PPP1R15AO75807 674 aaPredicted RBP28.21■■■□□ 2.11
SPIDR-220ENST00000522900 HDGFP51858 240 aaKnown RBP28.21■■■□□ 2.11
SPIDR-220ENST00000522900 KCNA6P17658 529 aa28.2■■■□□ 2.1
SPIDR-220ENST00000522900 TRIM52Q96A61 297 aa28.2■■■□□ 2.1
SPIDR-220ENST00000522900 ALKQ9UM73 1620 aa28.2■■■□□ 2.1
SPIDR-220ENST00000522900 PLEKHG1Q9ULL1 1385 aa28.19■■■□□ 2.1
SPIDR-220ENST00000522900 HSPA1LP34931 641 aa28.17■■■□□ 2.1
SPIDR-220ENST00000522900 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.17■■■□□ 2.1
SPIDR-220ENST00000522900 RBM33Q96EV2 1170 aaKnown RBP28.16■■■□□ 2.1
SPIDR-220ENST00000522900 PROSER2Q86WR7 435 aaPredicted RBP28.13■■■□□ 2.09
SPIDR-220ENST00000522900 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
SPIDR-220ENST00000522900 TBX22Q9Y458 520 aa28.11■■■□□ 2.09
SPIDR-220ENST00000522900 DISP3Q9P2K9 1392 aa28.1■■■□□ 2.09
SPIDR-220ENST00000522900 SLC4A1APQ9BWU0 796 aaKnown RBP28.09■■■□□ 2.09
SPIDR-220ENST00000522900 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
SPIDR-220ENST00000522900 XIRP1Q702N8 1843 aaKnown RBP28.08■■■□□ 2.09
SPIDR-220ENST00000522900 ADAMTS13Q76LX8 1427 aa28.08■■■□□ 2.09
SPIDR-220ENST00000522900 ZNF326Q5BKZ1 582 aaKnown RBP28.07■■■□□ 2.08
SPIDR-220ENST00000522900 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
SPIDR-220ENST00000522900 CLTCL1P53675 1640 aa28.03■■■□□ 2.08
SPIDR-220ENST00000522900 TRPM2O94759 1503 aa28.02■■■□□ 2.08
SPIDR-220ENST00000522900 FOXD1Q16676 465 aa28.02■■■□□ 2.08
SPIDR-220ENST00000522900 NKTRP30414 1462 aaKnown RBP28.02■■■□□ 2.08
SPIDR-220ENST00000522900 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
SPIDR-220ENST00000522900 ILDR2Q71H61 639 aa27.96■■■□□ 2.07
SPIDR-220ENST00000522900 PTPRUQ92729 1446 aa27.94■■■□□ 2.06
SPIDR-220ENST00000522900 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
SPIDR-220ENST00000522900 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
SPIDR-220ENST00000522900 PIK3R4Q99570 1358 aa27.94■■■□□ 2.06
SPIDR-220ENST00000522900 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
SPIDR-220ENST00000522900 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
SPIDR-220ENST00000522900 MSH6P52701 1360 aa27.91■■■□□ 2.06
SPIDR-220ENST00000522900 FAM135BQ49AJ0 1406 aa27.91■■■□□ 2.06
SPIDR-220ENST00000522900 NRXN3Q9Y4C0 1643 aa27.9■■■□□ 2.06
SPIDR-220ENST00000522900 METP08581 1390 aa27.89■■■□□ 2.06
SPIDR-220ENST00000522900 SETBP1Q9Y6X0 1596 aa27.89■■■□□ 2.05
SPIDR-220ENST00000522900 SETD5Q9C0A6 1442 aa27.88■■■□□ 2.05
SPIDR-220ENST00000522900 SLAIN2Q9P270 581 aa27.87■■■□□ 2.05
SPIDR-220ENST00000522900 C14orf37Q86TY3 774 aa27.86■■■□□ 2.05
SPIDR-220ENST00000522900 KIF1BO60333 1816 aa27.85■■■□□ 2.05
SPIDR-220ENST00000522900 NCOA3Q9Y6Q9 1424 aa27.85■■■□□ 2.05
SPIDR-220ENST00000522900 VGFO15240 615 aaPredicted RBP27.84■■■□□ 2.05
SPIDR-220ENST00000522900 RPGRIP1LQ68CZ1 1315 aa27.83■■■□□ 2.05
SPIDR-220ENST00000522900 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
SPIDR-220ENST00000522900 MED1Q15648 1581 aaPredicted RBP27.8■■■□□ 2.04
SPIDR-220ENST00000522900 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
SPIDR-220ENST00000522900 RGL3Q3MIN7 710 aa27.79■■■□□ 2.04
SPIDR-220ENST00000522900 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
SPIDR-220ENST00000522900 CCDC144AA2RUR9 1427 aa27.78■■■□□ 2.04
SPIDR-220ENST00000522900 ATF3P18847 181 aa27.76■■■□□ 2.03
SPIDR-220ENST00000522900 CADPS2Q86UW7 1296 aa27.76■■■□□ 2.03
SPIDR-220ENST00000522900 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
SPIDR-220ENST00000522900 ACIN1Q9UKV3 1341 aaKnown RBP27.75■■■□□ 2.03
SPIDR-220ENST00000522900 SPATA31E1Q6ZUB1 1445 aa27.74■■■□□ 2.03
SPIDR-220ENST00000522900 ADGRF5Q8IZF2 1346 aa27.73■■■□□ 2.03
SPIDR-220ENST00000522900 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.73■■■□□ 2.03
SPIDR-220ENST00000522900 PPLO60437 1756 aa27.69■■■□□ 2.02
SPIDR-220ENST00000522900 PHF23Q9BUL5 403 aaPredicted RBP27.66■■■□□ 2.02
SPIDR-220ENST00000522900 ROBO2Q9HCK4 1378 aa27.65■■■□□ 2.02
SPIDR-220ENST00000522900 SETD1AO15047 1707 aaKnown RBP27.65■■■□□ 2.02
SPIDR-220ENST00000522900 BRINP3Q76B58 766 aa27.64■■■□□ 2.02
SPIDR-220ENST00000522900 SOCS7O14512 581 aa27.63■■■□□ 2.01
SPIDR-220ENST00000522900 DCCP43146 1447 aa27.63■■■□□ 2.01
SPIDR-220ENST00000522900 ANKRD30BQ9BXX2 1392 aa27.62■■■□□ 2.01
SPIDR-220ENST00000522900 ADGRL3Q9HAR2 1447 aa27.61■■■□□ 2.01
SPIDR-220ENST00000522900 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
SPIDR-220ENST00000522900 MST1RQ04912 1400 aa27.59■■■□□ 2.01
SPIDR-220ENST00000522900 HRCP23327 699 aa27.59■■■□□ 2.01
SPIDR-220ENST00000522900 PTCH1Q13635 1447 aa27.58■■■□□ 2.01
SPIDR-220ENST00000522900 RGS17Q9UGC6 210 aaPredicted RBP27.58■■■□□ 2.01
SPIDR-220ENST00000522900 TMEM132EQ6IEE7 984 aa27.57■■■□□ 2
SPIDR-220ENST00000522900 STK26Q9P289 416 aa27.56■■■□□ 2
SPIDR-220ENST00000522900 JCADQ9P266 1359 aa27.56■■■□□ 2
SPIDR-220ENST00000522900 PRAG1Q86YV5 1406 aa27.55■■■□□ 2
SPIDR-220ENST00000522900 COL16A1Q07092 1604 aaPredicted RBP27.55■■■□□ 2
SPIDR-220ENST00000522900 IFT172Q9UG01 1749 aa27.55■■■□□ 2
SPIDR-220ENST00000522900 NALCNQ8IZF0 1738 aa27.54■■■□□ 2
SPIDR-220ENST00000522900 PIK3C2GO75747 1445 aa27.53■■■□□ 2
SPIDR-220ENST00000522900 DDX17Q92841 729 aaKnown RBP27.52■■■□□ 2
SPIDR-220ENST00000522900 AHDC1Q5TGY3 1603 aaPredicted RBP27.52■■■□□ 2
SPIDR-220ENST00000522900 WAPLQ7Z5K2 1190 aa27.51■■□□□ 1.99
SPIDR-220ENST00000522900 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
SPIDR-220ENST00000522900 LRPPRCP42704 1394 aaKnown RBP27.49■■□□□ 1.99
SPIDR-220ENST00000522900 CFAP70Q5T0N1 1121 aa27.49■■□□□ 1.99
SPIDR-220ENST00000522900 C14orf93Q9H972 538 aaKnown RBP27.49■■□□□ 1.99
SPIDR-220ENST00000522900 C1orf167Q5SNV9 1468 aa27.49■■□□□ 1.99
SPIDR-220ENST00000522900 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
SPIDR-220ENST00000522900 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
SPIDR-220ENST00000522900 NRXN1Q9ULB1 1477 aa27.45■■□□□ 1.99
SPIDR-220ENST00000522900 PLEKHH1Q9ULM0 1364 aa27.45■■□□□ 1.98
SPIDR-220ENST00000522900 TECPR2O15040 1411 aa27.44■■□□□ 1.98
SPIDR-220ENST00000522900 MYOM2P54296 1465 aa27.44■■□□□ 1.98
SPIDR-220ENST00000522900 POTEAQ6S8J7 498 aa27.43■■□□□ 1.98
SPIDR-220ENST00000522900 SPATA31A6Q5VVP1 1343 aa27.42■■□□□ 1.98
SPIDR-220ENST00000522900 YTHDC2Q9H6S0 1430 aaKnown RBP27.42■■□□□ 1.98
SPIDR-220ENST00000522900 KDM2AQ9Y2K7 1162 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms