RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-213ENST00000522504 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
TRAPPC9-213ENST00000522504 BCANQ96GW7 911 aa23.73■■□□□ 1.39
TRAPPC9-213ENST00000522504 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
TRAPPC9-213ENST00000522504 ROBO1Q9Y6N7 1651 aa23.72■■□□□ 1.39
TRAPPC9-213ENST00000522504 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
TRAPPC9-213ENST00000522504 PLEKHG1Q9ULL1 1385 aa23.7■■□□□ 1.38
TRAPPC9-213ENST00000522504 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
TRAPPC9-213ENST00000522504 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
TRAPPC9-213ENST00000522504 MYO5BQ9ULV0 1848 aa23.67■■□□□ 1.38
TRAPPC9-213ENST00000522504 MSH6P52701 1360 aa23.66■■□□□ 1.38
TRAPPC9-213ENST00000522504 SLAIN2Q9P270 581 aa23.66■■□□□ 1.38
TRAPPC9-213ENST00000522504 GCC2Q8IWJ2 1684 aa23.65■■□□□ 1.38
TRAPPC9-213ENST00000522504 PPP1R15AO75807 674 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC9-213ENST00000522504 NUTM2DQ5VT03 806 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC9-213ENST00000522504 UNC13BO14795 1591 aa23.64■■□□□ 1.37
TRAPPC9-213ENST00000522504 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
TRAPPC9-213ENST00000522504 TBX22Q9Y458 520 aa23.62■■□□□ 1.37
TRAPPC9-213ENST00000522504 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
TRAPPC9-213ENST00000522504 ADAMTS13Q76LX8 1427 aa23.61■■□□□ 1.37
TRAPPC9-213ENST00000522504 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
TRAPPC9-213ENST00000522504 E9PCH4 1651 aa23.6■■□□□ 1.37
TRAPPC9-213ENST00000522504 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
TRAPPC9-213ENST00000522504 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRAPPC9-213ENST00000522504 PHLPP1O60346 1717 aa23.55■■□□□ 1.36
TRAPPC9-213ENST00000522504 JCADQ9P266 1359 aa23.54■■□□□ 1.36
TRAPPC9-213ENST00000522504 IQGAP3Q86VI3 1631 aa23.54■■□□□ 1.36
TRAPPC9-213ENST00000522504 NUP155O75694 1391 aa23.53■■□□□ 1.36
TRAPPC9-213ENST00000522504 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
TRAPPC9-213ENST00000522504 COL16A1Q07092 1604 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC9-213ENST00000522504 ITGAEP38570 1179 aa23.52■■□□□ 1.36
TRAPPC9-213ENST00000522504 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
TRAPPC9-213ENST00000522504 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
TRAPPC9-213ENST00000522504 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
TRAPPC9-213ENST00000522504 C19orf44Q9H6X5 657 aa23.49■■□□□ 1.35
TRAPPC9-213ENST00000522504 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
TRAPPC9-213ENST00000522504 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
TRAPPC9-213ENST00000522504 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
TRAPPC9-213ENST00000522504 LRP6O75581 1613 aa23.48■■□□□ 1.35
TRAPPC9-213ENST00000522504 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC9-213ENST00000522504 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
TRAPPC9-213ENST00000522504 ATF3P18847 181 aa23.45■■□□□ 1.34
TRAPPC9-213ENST00000522504 TRPM2O94759 1503 aa23.43■■□□□ 1.34
TRAPPC9-213ENST00000522504 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC9-213ENST00000522504 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
TRAPPC9-213ENST00000522504 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
TRAPPC9-213ENST00000522504 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
TRAPPC9-213ENST00000522504 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
TRAPPC9-213ENST00000522504 METP08581 1390 aa23.39■■□□□ 1.33
TRAPPC9-213ENST00000522504 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
TRAPPC9-213ENST00000522504 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-213ENST00000522504 ZNF326Q5BKZ1 582 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-213ENST00000522504 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-213ENST00000522504 DCCP43146 1447 aa23.34■■□□□ 1.33
TRAPPC9-213ENST00000522504 SPHKAPQ2M3C7 1700 aa23.34■■□□□ 1.33
TRAPPC9-213ENST00000522504 SHPRHQ149N8 1683 aa23.34■■□□□ 1.33
TRAPPC9-213ENST00000522504 MST1RQ04912 1400 aa23.33■■□□□ 1.33
TRAPPC9-213ENST00000522504 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.32
TRAPPC9-213ENST00000522504 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC9-213ENST00000522504 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC9-213ENST00000522504 ZNF772Q68DY9 489 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC9-213ENST00000522504 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC9-213ENST00000522504 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
TRAPPC9-213ENST00000522504 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
TRAPPC9-213ENST00000522504 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
TRAPPC9-213ENST00000522504 NEXMIFQ5QGS0 1516 aa23.29■■□□□ 1.32
TRAPPC9-213ENST00000522504 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
TRAPPC9-213ENST00000522504 ADGRL3Q9HAR2 1447 aa23.26■■□□□ 1.31
TRAPPC9-213ENST00000522504 UPF1Q92900 1129 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRAPPC9-213ENST00000522504 NAIPQ13075 1403 aa23.25■■□□□ 1.31
TRAPPC9-213ENST00000522504 NHSL1Q5SYE7 1610 aa23.24■■□□□ 1.31
TRAPPC9-213ENST00000522504 RXRBP28702 533 aa23.23■■□□□ 1.31
TRAPPC9-213ENST00000522504 AFF2P51816 1311 aa23.23■■□□□ 1.31
TRAPPC9-213ENST00000522504 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
TRAPPC9-213ENST00000522504 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
TRAPPC9-213ENST00000522504 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
TRAPPC9-213ENST00000522504 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
TRAPPC9-213ENST00000522504 ROBO2Q9HCK4 1378 aa23.19■■□□□ 1.3
TRAPPC9-213ENST00000522504 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
TRAPPC9-213ENST00000522504 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
TRAPPC9-213ENST00000522504 C8orf37Q96NL8 207 aa23.16■■□□□ 1.3
TRAPPC9-213ENST00000522504 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
TRAPPC9-213ENST00000522504 ORAI2Q96SN7 254 aa23.15■■□□□ 1.3
TRAPPC9-213ENST00000522504 CDK12Q9NYV4 1490 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC9-213ENST00000522504 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC9-213ENST00000522504 KIF1BO60333 1816 aa23.13■■□□□ 1.29
TRAPPC9-213ENST00000522504 QTRT2Q9H974 415 aaKnown RBP23.12■■□□□ 1.29
TRAPPC9-213ENST00000522504 HFM1A2PYH4 1435 aa23.11■■□□□ 1.29
TRAPPC9-213ENST00000522504 ADAMTS2O95450 1211 aa23.11■■□□□ 1.29
TRAPPC9-213ENST00000522504 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC9-213ENST00000522504 RGS12O14924 1447 aa23.1■■□□□ 1.29
TRAPPC9-213ENST00000522504 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
TRAPPC9-213ENST00000522504 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
TRAPPC9-213ENST00000522504 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.29
TRAPPC9-213ENST00000522504 LAMC1P11047 1609 aa23.08■■□□□ 1.29
TRAPPC9-213ENST00000522504 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
TRAPPC9-213ENST00000522504 FOXD1Q16676 465 aa23.08■■□□□ 1.29
TRAPPC9-213ENST00000522504 NGLY1Q96IV0 654 aa23.06■■□□□ 1.28
TRAPPC9-213ENST00000522504 PPLO60437 1756 aa23.03■■□□□ 1.28
TRAPPC9-213ENST00000522504 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms