RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 PPP1R15AO75807 674 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-219ENST00000522321 SETD1BQ9UPS6 1966 aaKnown RBP17.59■□□□□ 0.41
SPIDR-219ENST00000522321 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
SPIDR-219ENST00000522321 STAC3Q96MF2 364 aa17.57■□□□□ 0.4
SPIDR-219ENST00000522321 MYOM2P54296 1465 aa17.56■□□□□ 0.4
SPIDR-219ENST00000522321 KDM5AP29375 1690 aaKnown RBP17.56■□□□□ 0.4
SPIDR-219ENST00000522321 THEMISQ8N1K5 641 aaPredicted RBP17.56■□□□□ 0.4
SPIDR-219ENST00000522321 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
SPIDR-219ENST00000522321 ZNF142P52746 1687 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-219ENST00000522321 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPIDR-219ENST00000522321 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
SPIDR-219ENST00000522321 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
SPIDR-219ENST00000522321 NEXMIFQ5QGS0 1516 aa17.54■□□□□ 0.4
SPIDR-219ENST00000522321 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-219ENST00000522321 EID1Q9Y6B2 187 aa17.54■□□□□ 0.4
SPIDR-219ENST00000522321 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-219ENST00000522321 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
SPIDR-219ENST00000522321 PRAG1Q86YV5 1406 aa17.52■□□□□ 0.4
SPIDR-219ENST00000522321 BCANQ96GW7 911 aa17.51■□□□□ 0.39
SPIDR-219ENST00000522321 ZFYVE9O95405 1425 aa17.49■□□□□ 0.39
SPIDR-219ENST00000522321 PPLO60437 1756 aa17.49■□□□□ 0.39
SPIDR-219ENST00000522321 IFT172Q9UG01 1749 aa17.49■□□□□ 0.39
SPIDR-219ENST00000522321 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
SPIDR-219ENST00000522321 SLIT1O75093 1534 aa17.48■□□□□ 0.39
SPIDR-219ENST00000522321 TXNDC2Q86VQ3 553 aa17.48■□□□□ 0.39
SPIDR-219ENST00000522321 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
SPIDR-219ENST00000522321 ROCK2O75116 1388 aaKnown RBP17.47■□□□□ 0.39
SPIDR-219ENST00000522321 RALGAPBQ86X10 1494 aa17.47■□□□□ 0.39
SPIDR-219ENST00000522321 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
SPIDR-219ENST00000522321 ARHGAP23Q9P227 1491 aa17.47■□□□□ 0.39
SPIDR-219ENST00000522321 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
SPIDR-219ENST00000522321 NRXN1Q9ULB1 1477 aa17.46■□□□□ 0.39
SPIDR-219ENST00000522321 NBPF8Q3BBV2 869 aa17.46■□□□□ 0.39
SPIDR-219ENST00000522321 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
SPIDR-219ENST00000522321 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
SPIDR-219ENST00000522321 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
SPIDR-219ENST00000522321 NCKAP5LQ9HCH0 1330 aa17.45■□□□□ 0.38
SPIDR-219ENST00000522321 PLEKHG1Q9ULL1 1385 aa17.43■□□□□ 0.38
SPIDR-219ENST00000522321 SOCS7O14512 581 aa17.43■□□□□ 0.38
SPIDR-219ENST00000522321 LAMC1P11047 1609 aa17.42■□□□□ 0.38
SPIDR-219ENST00000522321 UBAP1LF5GYI3 381 aa17.41■□□□□ 0.38
SPIDR-219ENST00000522321 LTKP29376 864 aa17.41■□□□□ 0.38
SPIDR-219ENST00000522321 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
SPIDR-219ENST00000522321 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
SPIDR-219ENST00000522321 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
SPIDR-219ENST00000522321 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
SPIDR-219ENST00000522321 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-219ENST00000522321 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
SPIDR-219ENST00000522321 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
SPIDR-219ENST00000522321 KIAA1210Q9ULL0 1709 aa17.37■□□□□ 0.37
SPIDR-219ENST00000522321 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-219ENST00000522321 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
SPIDR-219ENST00000522321 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
SPIDR-219ENST00000522321 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
SPIDR-219ENST00000522321 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
SPIDR-219ENST00000522321 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
SPIDR-219ENST00000522321 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
SPIDR-219ENST00000522321 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
SPIDR-219ENST00000522321 USP47Q96K76 1375 aa17.35■□□□□ 0.37
SPIDR-219ENST00000522321 IQGAP1P46940 1657 aa17.35■□□□□ 0.37
SPIDR-219ENST00000522321 POLR1AO95602 1720 aaPredicted RBP17.34■□□□□ 0.37
SPIDR-219ENST00000522321 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
SPIDR-219ENST00000522321 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
SPIDR-219ENST00000522321 NRXN3Q9Y4C0 1643 aa17.32■□□□□ 0.36
SPIDR-219ENST00000522321 ADAMTS13Q76LX8 1427 aa17.32■□□□□ 0.36
SPIDR-219ENST00000522321 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
SPIDR-219ENST00000522321 MED14O60244 1454 aa17.31■□□□□ 0.36
SPIDR-219ENST00000522321 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
SPIDR-219ENST00000522321 STK26Q9P289 416 aa17.3■□□□□ 0.36
SPIDR-219ENST00000522321 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
SPIDR-219ENST00000522321 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
SPIDR-219ENST00000522321 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
SPIDR-219ENST00000522321 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
SPIDR-219ENST00000522321 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
SPIDR-219ENST00000522321 METP08581 1390 aa17.28■□□□□ 0.36
SPIDR-219ENST00000522321 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
SPIDR-219ENST00000522321 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
SPIDR-219ENST00000522321 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
SPIDR-219ENST00000522321 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
SPIDR-219ENST00000522321 POGKQ9P215 609 aa17.24■□□□□ 0.35
SPIDR-219ENST00000522321 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-219ENST00000522321 TOM1O60784 492 aa17.23■□□□□ 0.35
SPIDR-219ENST00000522321 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-219ENST00000522321 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
SPIDR-219ENST00000522321 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
SPIDR-219ENST00000522321 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
SPIDR-219ENST00000522321 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
SPIDR-219ENST00000522321 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
SPIDR-219ENST00000522321 TECPR2O15040 1411 aa17.21■□□□□ 0.34
SPIDR-219ENST00000522321 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
SPIDR-219ENST00000522321 CPS1P31327 1500 aa17.2■□□□□ 0.34
SPIDR-219ENST00000522321 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
SPIDR-219ENST00000522321 HSPA1LP34931 641 aa17.19■□□□□ 0.34
SPIDR-219ENST00000522321 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPIDR-219ENST00000522321 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
SPIDR-219ENST00000522321 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
SPIDR-219ENST00000522321 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
SPIDR-219ENST00000522321 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
SPIDR-219ENST00000522321 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
SPIDR-219ENST00000522321 TMF1P82094 1093 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms