RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
PRKDC-204ENST00000521331 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
PRKDC-204ENST00000521331 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
PRKDC-204ENST00000521331 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
PRKDC-204ENST00000521331 PPP1R15AO75807 674 aaPredicted RBP22.95■■□□□ 1.26
PRKDC-204ENST00000521331 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
PRKDC-204ENST00000521331 MSH6P52701 1360 aa22.94■■□□□ 1.26
PRKDC-204ENST00000521331 ROCK1Q13464 1354 aa22.93■■□□□ 1.26
PRKDC-204ENST00000521331 RBM33Q96EV2 1170 aaKnown RBP22.93■■□□□ 1.26
PRKDC-204ENST00000521331 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
PRKDC-204ENST00000521331 UNC13BO14795 1591 aa22.91■■□□□ 1.26
PRKDC-204ENST00000521331 RGS17Q9UGC6 210 aaPredicted RBP22.9■■□□□ 1.26
PRKDC-204ENST00000521331 TBX22Q9Y458 520 aa22.9■■□□□ 1.26
PRKDC-204ENST00000521331 GCC2Q8IWJ2 1684 aa22.89■■□□□ 1.25
PRKDC-204ENST00000521331 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.25
PRKDC-204ENST00000521331 TMEM131LA2VDJ0 1609 aa22.89■■□□□ 1.25
PRKDC-204ENST00000521331 CHGAP10645 457 aaKnown RBP22.88■■□□□ 1.25
PRKDC-204ENST00000521331 SLAIN2Q9P270 581 aa22.88■■□□□ 1.25
PRKDC-204ENST00000521331 NCOA3Q9Y6Q9 1424 aa22.86■■□□□ 1.25
PRKDC-204ENST00000521331 NUP155O75694 1391 aa22.83■■□□□ 1.25
PRKDC-204ENST00000521331 IQGAP3Q86VI3 1631 aa22.82■■□□□ 1.24
PRKDC-204ENST00000521331 PIK3R4Q99570 1358 aa22.82■■□□□ 1.24
PRKDC-204ENST00000521331 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
PRKDC-204ENST00000521331 E9PCH4 1651 aa22.81■■□□□ 1.24
PRKDC-204ENST00000521331 CHD2O14647 1828 aaKnown RBP22.81■■□□□ 1.24
PRKDC-204ENST00000521331 MYO5BQ9ULV0 1848 aa22.81■■□□□ 1.24
PRKDC-204ENST00000521331 DIP2AQ14689 1571 aa22.8■■□□□ 1.24
PRKDC-204ENST00000521331 JCADQ9P266 1359 aa22.79■■□□□ 1.24
PRKDC-204ENST00000521331 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
PRKDC-204ENST00000521331 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
PRKDC-204ENST00000521331 POTEAQ6S8J7 498 aa22.77■■□□□ 1.24
PRKDC-204ENST00000521331 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
PRKDC-204ENST00000521331 ITGAEP38570 1179 aa22.76■■□□□ 1.23
PRKDC-204ENST00000521331 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
PRKDC-204ENST00000521331 ATF3P18847 181 aa22.74■■□□□ 1.23
PRKDC-204ENST00000521331 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
PRKDC-204ENST00000521331 TRPM2O94759 1503 aa22.73■■□□□ 1.23
PRKDC-204ENST00000521331 AMOTL2Q9Y2J4 779 aa22.72■■□□□ 1.23
PRKDC-204ENST00000521331 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
PRKDC-204ENST00000521331 SPATA31A6Q5VVP1 1343 aa22.69■■□□□ 1.22
PRKDC-204ENST00000521331 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
PRKDC-204ENST00000521331 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
PRKDC-204ENST00000521331 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
PRKDC-204ENST00000521331 AHDC1Q5TGY3 1603 aaPredicted RBP22.66■■□□□ 1.22
PRKDC-204ENST00000521331 DCCP43146 1447 aa22.65■■□□□ 1.22
PRKDC-204ENST00000521331 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
PRKDC-204ENST00000521331 SETBP1Q9Y6X0 1596 aa22.64■■□□□ 1.22
PRKDC-204ENST00000521331 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
PRKDC-204ENST00000521331 BRINP3Q76B58 766 aa22.62■■□□□ 1.21
PRKDC-204ENST00000521331 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
PRKDC-204ENST00000521331 NRXN3Q9Y4C0 1643 aa22.6■■□□□ 1.21
PRKDC-204ENST00000521331 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
PRKDC-204ENST00000521331 LRP6O75581 1613 aa22.6■■□□□ 1.21
PRKDC-204ENST00000521331 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
PRKDC-204ENST00000521331 METP08581 1390 aa22.58■■□□□ 1.21
PRKDC-204ENST00000521331 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
PRKDC-204ENST00000521331 SHPRHQ149N8 1683 aa22.56■■□□□ 1.2
PRKDC-204ENST00000521331 ASXL1Q8IXJ9 1541 aa22.55■■□□□ 1.2
PRKDC-204ENST00000521331 MST1RQ04912 1400 aa22.55■■□□□ 1.2
PRKDC-204ENST00000521331 NAIPQ13075 1403 aa22.55■■□□□ 1.2
PRKDC-204ENST00000521331 NEXMIFQ5QGS0 1516 aa22.54■■□□□ 1.2
PRKDC-204ENST00000521331 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
PRKDC-204ENST00000521331 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
PRKDC-204ENST00000521331 CLTCL1P53675 1640 aa22.53■■□□□ 1.2
PRKDC-204ENST00000521331 LRRC59Q96AG4 307 aaKnown RBP22.5■■□□□ 1.19
PRKDC-204ENST00000521331 NUTM2BA6NNL0 878 aaPredicted RBP22.49■■□□□ 1.19
PRKDC-204ENST00000521331 NUTM2EB1AL46 878 aaPredicted RBP22.49■■□□□ 1.19
PRKDC-204ENST00000521331 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
PRKDC-204ENST00000521331 NUTM2AQ8IVF1 878 aaPredicted RBP22.49■■□□□ 1.19
PRKDC-204ENST00000521331 RXRBP28702 533 aa22.47■■□□□ 1.19
PRKDC-204ENST00000521331 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
PRKDC-204ENST00000521331 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
PRKDC-204ENST00000521331 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
PRKDC-204ENST00000521331 RPGRIP1LQ68CZ1 1315 aa22.46■■□□□ 1.19
PRKDC-204ENST00000521331 HFM1A2PYH4 1435 aa22.46■■□□□ 1.19
PRKDC-204ENST00000521331 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
PRKDC-204ENST00000521331 KIF1BO60333 1816 aa22.43■■□□□ 1.18
PRKDC-204ENST00000521331 AFF2P51816 1311 aa22.43■■□□□ 1.18
PRKDC-204ENST00000521331 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
PRKDC-204ENST00000521331 C1orf167Q5SNV9 1468 aa22.42■■□□□ 1.18
PRKDC-204ENST00000521331 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
PRKDC-204ENST00000521331 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
PRKDC-204ENST00000521331 PNPLA6Q8IY17 1366 aa22.41■■□□□ 1.18
PRKDC-204ENST00000521331 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
PRKDC-204ENST00000521331 DDX17Q92841 729 aaKnown RBP22.41■■□□□ 1.18
PRKDC-204ENST00000521331 ROBO2Q9HCK4 1378 aa22.4■■□□□ 1.18
PRKDC-204ENST00000521331 UPF1Q92900 1129 aaKnown RBP eCLIP22.4■■□□□ 1.18
PRKDC-204ENST00000521331 C8orf37Q96NL8 207 aa22.37■■□□□ 1.17
PRKDC-204ENST00000521331 SOS2Q07890 1332 aaPredicted RBP22.34■■□□□ 1.17
PRKDC-204ENST00000521331 ORAI2Q96SN7 254 aa22.34■■□□□ 1.17
PRKDC-204ENST00000521331 LAMC1P11047 1609 aa22.33■■□□□ 1.17
PRKDC-204ENST00000521331 RBM6P78332 1123 aaKnown RBP22.33■■□□□ 1.17
PRKDC-204ENST00000521331 QTRT2Q9H974 415 aaKnown RBP22.33■■□□□ 1.17
PRKDC-204ENST00000521331 NGLY1Q96IV0 654 aa22.31■■□□□ 1.16
PRKDC-204ENST00000521331 ADAMTS2O95450 1211 aa22.3■■□□□ 1.16
PRKDC-204ENST00000521331 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
PRKDC-204ENST00000521331 PPLO60437 1756 aa22.28■■□□□ 1.16
PRKDC-204ENST00000521331 FOXD1Q16676 465 aa22.28■■□□□ 1.16
PRKDC-204ENST00000521331 RGS12O14924 1447 aa22.27■■□□□ 1.16
PRKDC-204ENST00000521331 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms