RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 CLTCL1P53675 1640 aa30.85■■■□□ 2.53
MCM4-211ENST00000520994 CPS1P31327 1500 aa30.85■■■□□ 2.53
MCM4-211ENST00000520994 RIMS2Q9UQ26 1411 aa30.85■■■□□ 2.53
MCM4-211ENST00000520994 FBXO41Q8TF61 875 aa30.84■■■□□ 2.53
MCM4-211ENST00000520994 KIF1BO60333 1816 aa30.84■■■□□ 2.53
MCM4-211ENST00000520994 PLEKHG1Q9ULL1 1385 aa30.81■■■□□ 2.52
MCM4-211ENST00000520994 CHGAP10645 457 aaKnown RBP30.79■■■□□ 2.52
MCM4-211ENST00000520994 ILDR1Q86SU0 546 aaPredicted RBP30.72■■■□□ 2.51
MCM4-211ENST00000520994 STRCP1A6NGW2 1772 aa30.71■■■□□ 2.51
MCM4-211ENST00000520994 DIP2AQ14689 1571 aa30.71■■■□□ 2.51
MCM4-211ENST00000520994 PPP1R15AO75807 674 aaPredicted RBP30.7■■■□□ 2.51
MCM4-211ENST00000520994 CCDC144AA2RUR9 1427 aa30.7■■■□□ 2.5
MCM4-211ENST00000520994 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
MCM4-211ENST00000520994 NEXMIFQ5QGS0 1516 aa30.68■■■□□ 2.5
MCM4-211ENST00000520994 TBX22Q9Y458 520 aa30.68■■■□□ 2.5
MCM4-211ENST00000520994 FOXD1Q16676 465 aa30.66■■■□□ 2.5
MCM4-211ENST00000520994 ZNF326Q5BKZ1 582 aaKnown RBP30.65■■■□□ 2.5
MCM4-211ENST00000520994 PIK3R4Q99570 1358 aa30.65■■■□□ 2.5
MCM4-211ENST00000520994 NWD1Q149M9 1564 aa30.64■■■□□ 2.5
MCM4-211ENST00000520994 SETBP1Q9Y6X0 1596 aa30.64■■■□□ 2.5
MCM4-211ENST00000520994 KCNA6P17658 529 aa30.64■■■□□ 2.5
MCM4-211ENST00000520994 ADAMTS13Q76LX8 1427 aa30.64■■■□□ 2.49
MCM4-211ENST00000520994 SLC26A8Q96RN1 970 aa30.63■■■□□ 2.49
MCM4-211ENST00000520994 CHD2O14647 1828 aaKnown RBP30.62■■■□□ 2.49
MCM4-211ENST00000520994 LRRC7Q96NW7 1537 aa30.62■■■□□ 2.49
MCM4-211ENST00000520994 SPATA31E1Q6ZUB1 1445 aa30.6■■■□□ 2.49
MCM4-211ENST00000520994 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
MCM4-211ENST00000520994 BCANQ96GW7 911 aa30.59■■■□□ 2.49
MCM4-211ENST00000520994 PPLO60437 1756 aa30.59■■■□□ 2.49
MCM4-211ENST00000520994 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
MCM4-211ENST00000520994 NRXN3Q9Y4C0 1643 aa30.58■■■□□ 2.49
MCM4-211ENST00000520994 ANKRD30BQ9BXX2 1392 aa30.55■■■□□ 2.48
MCM4-211ENST00000520994 NUTM2DQ5VT03 806 aaPredicted RBP30.55■■■□□ 2.48
MCM4-211ENST00000520994 IFT172Q9UG01 1749 aa30.52■■■□□ 2.48
MCM4-211ENST00000520994 XIRP1Q702N8 1843 aaKnown RBP30.51■■■□□ 2.47
MCM4-211ENST00000520994 NCOA3Q9Y6Q9 1424 aa30.48■■■□□ 2.47
MCM4-211ENST00000520994 TRIM26Q12899 539 aaPredicted RBP30.48■■■□□ 2.47
MCM4-211ENST00000520994 TOM1O60784 492 aa30.47■■■□□ 2.47
MCM4-211ENST00000520994 UBAP1LF5GYI3 381 aa30.45■■■□□ 2.47
MCM4-211ENST00000520994 SETD1AO15047 1707 aaKnown RBP30.43■■■□□ 2.46
MCM4-211ENST00000520994 TMEM94Q12767 1356 aa30.42■■■□□ 2.46
MCM4-211ENST00000520994 PROSER2Q86WR7 435 aaPredicted RBP30.42■■■□□ 2.46
MCM4-211ENST00000520994 XRN1Q8IZH2 1706 aaKnown RBP30.42■■■□□ 2.46
MCM4-211ENST00000520994 PTPRUQ92729 1446 aa30.4■■■□□ 2.46
MCM4-211ENST00000520994 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
MCM4-211ENST00000520994 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
MCM4-211ENST00000520994 PRAG1Q86YV5 1406 aa30.39■■■□□ 2.45
MCM4-211ENST00000520994 STAC3Q96MF2 364 aa30.38■■■□□ 2.45
MCM4-211ENST00000520994 AMOTL2Q9Y2J4 779 aa30.38■■■□□ 2.45
MCM4-211ENST00000520994 METP08581 1390 aa30.38■■■□□ 2.45
MCM4-211ENST00000520994 MYOM2P54296 1465 aa30.38■■■□□ 2.45
MCM4-211ENST00000520994 SENP3Q9H4L4 574 aaPredicted RBP30.36■■■□□ 2.45
MCM4-211ENST00000520994 NRXN1Q9ULB1 1477 aa30.36■■■□□ 2.45
MCM4-211ENST00000520994 PIK3C2GO75747 1445 aa30.34■■■□□ 2.45
MCM4-211ENST00000520994 ADGRF5Q8IZF2 1346 aa30.34■■■□□ 2.45
MCM4-211ENST00000520994 MSH6P52701 1360 aa30.3■■■□□ 2.44
MCM4-211ENST00000520994 PTCH1Q13635 1447 aa30.28■■■□□ 2.44
MCM4-211ENST00000520994 LAMC1P11047 1609 aa30.27■■■□□ 2.44
MCM4-211ENST00000520994 C19orf44Q9H6X5 657 aa30.24■■■□□ 2.43
MCM4-211ENST00000520994 DCCP43146 1447 aa30.23■■■□□ 2.43
MCM4-211ENST00000520994 C14orf93Q9H972 538 aaKnown RBP30.23■■■□□ 2.43
MCM4-211ENST00000520994 FAM135BQ49AJ0 1406 aa30.22■■■□□ 2.43
MCM4-211ENST00000520994 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.21■■■□□ 2.43
MCM4-211ENST00000520994 TECPR2O15040 1411 aa30.21■■■□□ 2.43
MCM4-211ENST00000520994 DHX57Q6P158 1386 aaKnown RBP30.2■■■□□ 2.43
MCM4-211ENST00000520994 RBM33Q96EV2 1170 aaKnown RBP30.2■■■□□ 2.43
MCM4-211ENST00000520994 PIP4K2BP78356 416 aa30.19■■■□□ 2.42
MCM4-211ENST00000520994 KNDC1Q76NI1 1749 aa30.19■■■□□ 2.42
MCM4-211ENST00000520994 CADPS2Q86UW7 1296 aa30.18■■■□□ 2.42
MCM4-211ENST00000520994 LRPPRCP42704 1394 aaKnown RBP30.17■■■□□ 2.42
MCM4-211ENST00000520994 ABCC11Q96J66 1382 aa30.17■■■□□ 2.42
MCM4-211ENST00000520994 ASXL1Q8IXJ9 1541 aa30.17■■■□□ 2.42
MCM4-211ENST00000520994 ADGRL3Q9HAR2 1447 aa30.15■■■□□ 2.42
MCM4-211ENST00000520994 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
MCM4-211ENST00000520994 C14orf37Q86TY3 774 aa30.14■■■□□ 2.42
MCM4-211ENST00000520994 SIRT1Q96EB6 747 aa30.14■■■□□ 2.42
MCM4-211ENST00000520994 SCAF1Q9H7N4 1312 aaKnown RBP30.14■■■□□ 2.42
MCM4-211ENST00000520994 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.41
MCM4-211ENST00000520994 SLAIN2Q9P270 581 aa30.12■■■□□ 2.41
MCM4-211ENST00000520994 YTHDC2Q9H6S0 1430 aaKnown RBP30.12■■■□□ 2.41
MCM4-211ENST00000520994 ATF3P18847 181 aa30.11■■■□□ 2.41
MCM4-211ENST00000520994 NALCNQ8IZF0 1738 aa30.1■■■□□ 2.41
MCM4-211ENST00000520994 CFAP70Q5T0N1 1121 aa30.09■■■□□ 2.41
MCM4-211ENST00000520994 ROBO1Q9Y6N7 1651 aa30.09■■■□□ 2.41
MCM4-211ENST00000520994 HSPA1LP34931 641 aa30.07■■■□□ 2.4
MCM4-211ENST00000520994 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
MCM4-211ENST00000520994 KIAA1210Q9ULL0 1709 aa30.06■■■□□ 2.4
MCM4-211ENST00000520994 TMEM132EQ6IEE7 984 aa30.06■■■□□ 2.4
MCM4-211ENST00000520994 KDM2AQ9Y2K7 1162 aa30.05■■■□□ 2.4
MCM4-211ENST00000520994 DLC1Q96QB1 1528 aa30.04■■■□□ 2.4
MCM4-211ENST00000520994 MST1RQ04912 1400 aa30.01■■■□□ 2.39
MCM4-211ENST00000520994 CDC42BPGQ6DT37 1551 aa29.99■■■□□ 2.39
MCM4-211ENST00000520994 STK26Q9P289 416 aa29.99■■■□□ 2.39
MCM4-211ENST00000520994 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
MCM4-211ENST00000520994 L3MBTL2Q969R5 705 aa29.95■■■□□ 2.39
MCM4-211ENST00000520994 AHDC1Q5TGY3 1603 aaPredicted RBP29.94■■■□□ 2.38
MCM4-211ENST00000520994 WAPLQ7Z5K2 1190 aa29.93■■■□□ 2.38
MCM4-211ENST00000520994 C1orf167Q5SNV9 1468 aa29.92■■■□□ 2.38
MCM4-211ENST00000520994 BRINP3Q76B58 766 aa29.91■■■□□ 2.38
MCM4-211ENST00000520994 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms