RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
HDAC2-209ENST00000520895 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
HDAC2-209ENST00000520895 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
HDAC2-209ENST00000520895 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
HDAC2-209ENST00000520895 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
HDAC2-209ENST00000520895 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
HDAC2-209ENST00000520895 BCANQ96GW7 911 aa22.71■■□□□ 1.23
HDAC2-209ENST00000520895 CERKQ8TCT0 537 aa22.7■■□□□ 1.22
HDAC2-209ENST00000520895 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
HDAC2-209ENST00000520895 ZNF335Q9H4Z2 1342 aaPredicted RBP22.66■■□□□ 1.22
HDAC2-209ENST00000520895 ILDR1Q86SU0 546 aaPredicted RBP22.66■■□□□ 1.22
HDAC2-209ENST00000520895 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
HDAC2-209ENST00000520895 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
HDAC2-209ENST00000520895 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
HDAC2-209ENST00000520895 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
HDAC2-209ENST00000520895 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
HDAC2-209ENST00000520895 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
HDAC2-209ENST00000520895 SLC26A8Q96RN1 970 aa22.62■■□□□ 1.21
HDAC2-209ENST00000520895 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
HDAC2-209ENST00000520895 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
HDAC2-209ENST00000520895 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
HDAC2-209ENST00000520895 PPLO60437 1756 aa22.58■■□□□ 1.21
HDAC2-209ENST00000520895 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
HDAC2-209ENST00000520895 CPS1P31327 1500 aa22.57■■□□□ 1.2
HDAC2-209ENST00000520895 VGFO15240 615 aaPredicted RBP22.57■■□□□ 1.2
HDAC2-209ENST00000520895 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
HDAC2-209ENST00000520895 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
HDAC2-209ENST00000520895 TBX22Q9Y458 520 aa22.54■■□□□ 1.2
HDAC2-209ENST00000520895 ADAMTS13Q76LX8 1427 aa22.53■■□□□ 1.2
HDAC2-209ENST00000520895 SETBP1Q9Y6X0 1596 aa22.53■■□□□ 1.2
HDAC2-209ENST00000520895 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
HDAC2-209ENST00000520895 NRXN3Q9Y4C0 1643 aa22.51■■□□□ 1.19
HDAC2-209ENST00000520895 KCNA6P17658 529 aa22.5■■□□□ 1.19
HDAC2-209ENST00000520895 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
HDAC2-209ENST00000520895 CHD2O14647 1828 aaKnown RBP22.49■■□□□ 1.19
HDAC2-209ENST00000520895 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
HDAC2-209ENST00000520895 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
HDAC2-209ENST00000520895 XIRP1Q702N8 1843 aaKnown RBP22.46■■□□□ 1.19
HDAC2-209ENST00000520895 ADGRF5Q8IZF2 1346 aa22.46■■□□□ 1.19
HDAC2-209ENST00000520895 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
HDAC2-209ENST00000520895 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
HDAC2-209ENST00000520895 NKTRP30414 1462 aaKnown RBP22.42■■□□□ 1.18
HDAC2-209ENST00000520895 PROSER2Q86WR7 435 aaPredicted RBP22.42■■□□□ 1.18
HDAC2-209ENST00000520895 MYOM2P54296 1465 aa22.41■■□□□ 1.18
HDAC2-209ENST00000520895 DCAF11Q8TEB1 546 aa22.41■■□□□ 1.18
HDAC2-209ENST00000520895 METP08581 1390 aa22.4■■□□□ 1.18
HDAC2-209ENST00000520895 AMOTL2Q9Y2J4 779 aa22.4■■□□□ 1.18
HDAC2-209ENST00000520895 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
HDAC2-209ENST00000520895 SETD1AO15047 1707 aaKnown RBP22.4■■□□□ 1.18
HDAC2-209ENST00000520895 PIK3C2GO75747 1445 aa22.39■■□□□ 1.17
HDAC2-209ENST00000520895 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
HDAC2-209ENST00000520895 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
HDAC2-209ENST00000520895 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
HDAC2-209ENST00000520895 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
HDAC2-209ENST00000520895 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
HDAC2-209ENST00000520895 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
HDAC2-209ENST00000520895 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
HDAC2-209ENST00000520895 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
HDAC2-209ENST00000520895 RBM33Q96EV2 1170 aaKnown RBP22.35■■□□□ 1.17
HDAC2-209ENST00000520895 LAMC1P11047 1609 aa22.35■■□□□ 1.17
HDAC2-209ENST00000520895 C14orf93Q9H972 538 aaKnown RBP22.32■■□□□ 1.16
HDAC2-209ENST00000520895 TOM1O60784 492 aa22.31■■□□□ 1.16
HDAC2-209ENST00000520895 CFAP70Q5T0N1 1121 aa22.31■■□□□ 1.16
HDAC2-209ENST00000520895 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
HDAC2-209ENST00000520895 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
HDAC2-209ENST00000520895 MSH6P52701 1360 aa22.28■■□□□ 1.16
HDAC2-209ENST00000520895 L3MBTL2Q969R5 705 aa22.27■■□□□ 1.16
HDAC2-209ENST00000520895 STK26Q9P289 416 aa22.27■■□□□ 1.16
HDAC2-209ENST00000520895 NCOA3Q9Y6Q9 1424 aa22.27■■□□□ 1.16
HDAC2-209ENST00000520895 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
HDAC2-209ENST00000520895 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
HDAC2-209ENST00000520895 PTCH1Q13635 1447 aa22.25■■□□□ 1.15
HDAC2-209ENST00000520895 LRPPRCP42704 1394 aaKnown RBP22.25■■□□□ 1.15
HDAC2-209ENST00000520895 PIP4K2BP78356 416 aa22.24■■□□□ 1.15
HDAC2-209ENST00000520895 ROBO2Q9HCK4 1378 aa22.24■■□□□ 1.15
HDAC2-209ENST00000520895 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
HDAC2-209ENST00000520895 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
HDAC2-209ENST00000520895 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
HDAC2-209ENST00000520895 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
HDAC2-209ENST00000520895 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
HDAC2-209ENST00000520895 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
HDAC2-209ENST00000520895 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
HDAC2-209ENST00000520895 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
HDAC2-209ENST00000520895 ATF3P18847 181 aa22.19■■□□□ 1.14
HDAC2-209ENST00000520895 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
HDAC2-209ENST00000520895 TECPR2O15040 1411 aa22.19■■□□□ 1.14
HDAC2-209ENST00000520895 NALCNQ8IZF0 1738 aa22.18■■□□□ 1.14
HDAC2-209ENST00000520895 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
HDAC2-209ENST00000520895 CLSPNQ9HAW4 1339 aa22.17■■□□□ 1.14
HDAC2-209ENST00000520895 CADPS2Q86UW7 1296 aa22.17■■□□□ 1.14
HDAC2-209ENST00000520895 ADGRL3Q9HAR2 1447 aa22.16■■□□□ 1.14
HDAC2-209ENST00000520895 WAPLQ7Z5K2 1190 aa22.16■■□□□ 1.14
HDAC2-209ENST00000520895 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
HDAC2-209ENST00000520895 SLAIN2Q9P270 581 aa22.14■■□□□ 1.13
HDAC2-209ENST00000520895 TRAK1Q9UPV9 953 aa22.14■■□□□ 1.13
HDAC2-209ENST00000520895 DCCP43146 1447 aa22.14■■□□□ 1.13
HDAC2-209ENST00000520895 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
HDAC2-209ENST00000520895 POGKQ9P215 609 aa22.12■■□□□ 1.13
HDAC2-209ENST00000520895 DLC1Q96QB1 1528 aa22.11■■□□□ 1.13
HDAC2-209ENST00000520895 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms