RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 MAP3K7O43318 606 aa9.69□□□□□ -0.86
FAM49B-218ENST00000520887 ONECUT3O60422 494 aaPredicted RBP9.69□□□□□ -0.86
FAM49B-218ENST00000520887 PTPN5P54829 565 aa9.69□□□□□ -0.86
FAM49B-218ENST00000520887 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
FAM49B-218ENST00000520887 WNT2BQ93097 391 aa9.69□□□□□ -0.86
FAM49B-218ENST00000520887 RAPGEF2Q9Y4G8 1499 aa9.68□□□□□ -0.86
FAM49B-218ENST00000520887 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
FAM49B-218ENST00000520887 IGF1RP08069 1367 aa9.67□□□□□ -0.86
FAM49B-218ENST00000520887 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
FAM49B-218ENST00000520887 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
FAM49B-218ENST00000520887 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
FAM49B-218ENST00000520887 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
FAM49B-218ENST00000520887 TRIM6-TRIM34B2RNG4 842 aa9.65□□□□□ -0.86
FAM49B-218ENST00000520887 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
FAM49B-218ENST00000520887 NUP160Q12769 1436 aa9.64□□□□□ -0.87
FAM49B-218ENST00000520887 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
FAM49B-218ENST00000520887 CLASP1Q7Z460 1538 aa9.62□□□□□ -0.87
FAM49B-218ENST00000520887 CTTNBP2Q8WZ74 1663 aa9.62□□□□□ -0.87
FAM49B-218ENST00000520887 ANKK1Q8NFD2 765 aa9.62□□□□□ -0.87
FAM49B-218ENST00000520887 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
FAM49B-218ENST00000520887 RUSC2Q8N2Y8 1516 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 KIF21BO75037 1637 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 OSBPP22059 807 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
FAM49B-218ENST00000520887 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
FAM49B-218ENST00000520887 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
FAM49B-218ENST00000520887 IQGAP2Q13576 1575 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 KIAA0586Q9BVV6 1533 aa9.61□□□□□ -0.87
FAM49B-218ENST00000520887 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
FAM49B-218ENST00000520887 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
FAM49B-218ENST00000520887 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
FAM49B-218ENST00000520887 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
FAM49B-218ENST00000520887 PRXQ9BXM0 1461 aa9.59□□□□□ -0.87
FAM49B-218ENST00000520887 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
FAM49B-218ENST00000520887 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
FAM49B-218ENST00000520887 ARHGEF11O15085 1522 aa9.58□□□□□ -0.88
FAM49B-218ENST00000520887 PRSS12P56730 875 aa9.58□□□□□ -0.88
FAM49B-218ENST00000520887 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
FAM49B-218ENST00000520887 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
FAM49B-218ENST00000520887 SOWAHBA6NEL2 793 aa9.57□□□□□ -0.88
FAM49B-218ENST00000520887 UBTFP17480 764 aaKnown RBP9.57□□□□□ -0.88
FAM49B-218ENST00000520887 BCAMP50895 628 aa9.57□□□□□ -0.88
FAM49B-218ENST00000520887 RIMBP3CA6NJZ7 1639 aa9.56□□□□□ -0.88
FAM49B-218ENST00000520887 RIMBP3BA6NNM3 1639 aa9.56□□□□□ -0.88
FAM49B-218ENST00000520887 RIMBP3Q9UFD9 1639 aa9.56□□□□□ -0.88
FAM49B-218ENST00000520887 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
FAM49B-218ENST00000520887 SHROOM2Q13796 1616 aa9.55□□□□□ -0.88
FAM49B-218ENST00000520887 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
FAM49B-218ENST00000520887 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
FAM49B-218ENST00000520887 PRG4Q92954 1404 aaPredicted RBP9.54□□□□□ -0.88
FAM49B-218ENST00000520887 MLLT3P42568 568 aaPredicted RBP9.52□□□□□ -0.89
FAM49B-218ENST00000520887 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
FAM49B-218ENST00000520887 KDM2AQ9Y2K7 1162 aa9.52□□□□□ -0.89
FAM49B-218ENST00000520887 SMAPO00193 183 aa9.51□□□□□ -0.89
FAM49B-218ENST00000520887 TATDN2Q93075 761 aa9.51□□□□□ -0.89
FAM49B-218ENST00000520887 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
FAM49B-218ENST00000520887 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
FAM49B-218ENST00000520887 UGGT2Q9NYU1 1516 aa9.51□□□□□ -0.89
FAM49B-218ENST00000520887 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 NYAP1Q6ZVC0 841 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
FAM49B-218ENST00000520887 WBP1LQ9NX94 342 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
FAM49B-218ENST00000520887 TSR3Q9UJK0 312 aaKnown RBP9.49□□□□□ -0.89
FAM49B-218ENST00000520887 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
FAM49B-218ENST00000520887 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
FAM49B-218ENST00000520887 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
FAM49B-218ENST00000520887 CYB5RLQ6IPT4 315 aa9.48□□□□□ -0.89
FAM49B-218ENST00000520887 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
FAM49B-218ENST00000520887 ARAP1Q96P48 1450 aa9.47□□□□□ -0.89
FAM49B-218ENST00000520887 RANGAP1P46060 587 aaPredicted RBP9.47□□□□□ -0.89
FAM49B-218ENST00000520887 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
FAM49B-218ENST00000520887 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
FAM49B-218ENST00000520887 PTPRGP23470 1445 aa9.47□□□□□ -0.89
FAM49B-218ENST00000520887 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
FAM49B-218ENST00000520887 SAMD7Q7Z3H4 446 aa9.46□□□□□ -0.9
FAM49B-218ENST00000520887 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
FAM49B-218ENST00000520887 HDGFP51858 240 aaKnown RBP9.45□□□□□ -0.9
FAM49B-218ENST00000520887 PPP4CP60510 307 aa9.45□□□□□ -0.9
FAM49B-218ENST00000520887 SEMA3EO15041 775 aa9.44□□□□□ -0.9
FAM49B-218ENST00000520887 ITGBL1O95965 494 aaPredicted RBP9.43□□□□□ -0.9
FAM49B-218ENST00000520887 SAMD9Q5K651 1589 aa9.42□□□□□ -0.9
FAM49B-218ENST00000520887 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
FAM49B-218ENST00000520887 DISP1Q96F81 1524 aa9.42□□□□□ -0.9
FAM49B-218ENST00000520887 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
FAM49B-218ENST00000520887 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
FAM49B-218ENST00000520887 A0A0G2JS52 829 aa9.41□□□□□ -0.9
FAM49B-218ENST00000520887 PTGDRQ13258 359 aa9.41□□□□□ -0.9
FAM49B-218ENST00000520887 KCNC4Q03721 635 aa9.4□□□□□ -0.9
FAM49B-218ENST00000520887 CLIP1P30622 1438 aa9.39□□□□□ -0.91
FAM49B-218ENST00000520887 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
FAM49B-218ENST00000520887 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
FAM49B-218ENST00000520887 EYA1Q99502 592 aa9.38□□□□□ -0.91
FAM49B-218ENST00000520887 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
FAM49B-218ENST00000520887 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
FAM49B-218ENST00000520887 UHRF1BP1LA0JNW5 1464 aa9.37□□□□□ -0.91
FAM49B-218ENST00000520887 RNF40O75150 1001 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms