RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 EIF3AQ14152 1382 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 PDE3AQ14432 1141 aa16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 TBC1D2Q9BYX2 928 aa16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-208ENST00000520857 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
TRAPPC9-208ENST00000520857 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-208ENST00000520857 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
TRAPPC9-208ENST00000520857 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.2
TRAPPC9-208ENST00000520857 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
TRAPPC9-208ENST00000520857 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
TRAPPC9-208ENST00000520857 KIAA0556O60303 1618 aa16.26■□□□□ 0.19
TRAPPC9-208ENST00000520857 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
TRAPPC9-208ENST00000520857 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
TRAPPC9-208ENST00000520857 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
TRAPPC9-208ENST00000520857 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
TRAPPC9-208ENST00000520857 TRAK2O60296 914 aa16.25■□□□□ 0.19
TRAPPC9-208ENST00000520857 MCM4P33991 863 aa16.25■□□□□ 0.19
TRAPPC9-208ENST00000520857 HSP90AA2PQ14568 343 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC9-208ENST00000520857 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
TRAPPC9-208ENST00000520857 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRAPPC9-208ENST00000520857 C22orf23Q9BZE7 217 aa16.24■□□□□ 0.19
TRAPPC9-208ENST00000520857 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-208ENST00000520857 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
TRAPPC9-208ENST00000520857 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
TRAPPC9-208ENST00000520857 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
TRAPPC9-208ENST00000520857 ITSN2Q9NZM3 1697 aa16.23■□□□□ 0.19
TRAPPC9-208ENST00000520857 USP19O94966 1318 aa16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 A2MP01023 1474 aa16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
TRAPPC9-208ENST00000520857 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
TRAPPC9-208ENST00000520857 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.19
TRAPPC9-208ENST00000520857 TBC1D32Q96NH3 1257 aa16.21■□□□□ 0.19
TRAPPC9-208ENST00000520857 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.18
TRAPPC9-208ENST00000520857 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.18
TRAPPC9-208ENST00000520857 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-208ENST00000520857 RLBP1P12271 317 aa16.2■□□□□ 0.18
TRAPPC9-208ENST00000520857 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
TRAPPC9-208ENST00000520857 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-208ENST00000520857 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
TRAPPC9-208ENST00000520857 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-208ENST00000520857 MAGI2Q86UL8 1455 aa16.18■□□□□ 0.18
TRAPPC9-208ENST00000520857 GPRASP1Q5JY77 1395 aa16.18■□□□□ 0.18
TRAPPC9-208ENST00000520857 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
TRAPPC9-208ENST00000520857 INSRP06213 1382 aa16.18■□□□□ 0.18
TRAPPC9-208ENST00000520857 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
TRAPPC9-208ENST00000520857 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
TRAPPC9-208ENST00000520857 MRE11P49959 708 aa16.16■□□□□ 0.18
TRAPPC9-208ENST00000520857 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
TRAPPC9-208ENST00000520857 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
TRAPPC9-208ENST00000520857 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-208ENST00000520857 TRAK1Q9UPV9 953 aa16.16■□□□□ 0.18
TRAPPC9-208ENST00000520857 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
TRAPPC9-208ENST00000520857 PTPRGP23470 1445 aa16.15■□□□□ 0.18
TRAPPC9-208ENST00000520857 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
TRAPPC9-208ENST00000520857 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
TRAPPC9-208ENST00000520857 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 ATP10BO94823 1461 aa16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.17
TRAPPC9-208ENST00000520857 MTHFSP49914 203 aa16.13■□□□□ 0.17
TRAPPC9-208ENST00000520857 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■■■□ 23
TRAPPC9-208ENST00000520857 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
TRAPPC9-208ENST00000520857 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
TRAPPC9-208ENST00000520857 ANTXR1Q9H6X2 564 aa16.13■□□□□ 0.17
TRAPPC9-208ENST00000520857 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
TRAPPC9-208ENST00000520857 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
TRAPPC9-208ENST00000520857 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
TRAPPC9-208ENST00000520857 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
TRAPPC9-208ENST00000520857 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
TRAPPC9-208ENST00000520857 ARHGAP5Q13017 1502 aa16.11■□□□□ 0.17
TRAPPC9-208ENST00000520857 ESPNB1AK53 854 aa16.11■□□□□ 0.17
TRAPPC9-208ENST00000520857 ASXL1Q8IXJ9 1541 aa16.11■□□□□ 0.17
TRAPPC9-208ENST00000520857 KIF3BO15066 747 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 MVPQ14764 893 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 PIK3C2GO75747 1445 aa16.1■□□□□ 0.17
TRAPPC9-208ENST00000520857 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
TRAPPC9-208ENST00000520857 E9PCH4 1651 aa16.09■□□□□ 0.17
TRAPPC9-208ENST00000520857 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
TRAPPC9-208ENST00000520857 CLCN1P35523 988 aa16.09■□□□□ 0.17
TRAPPC9-208ENST00000520857 TRPM1Q7Z4N2 1603 aa16.09■□□□□ 0.17
TRAPPC9-208ENST00000520857 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.17
TRAPPC9-208ENST00000520857 SYNJ2O15056 1496 aa16.08■□□□□ 0.17
TRAPPC9-208ENST00000520857 ERCC6Q03468 1493 aa16.08■□□□□ 0.17
TRAPPC9-208ENST00000520857 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-208ENST00000520857 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
TRAPPC9-208ENST00000520857 ARID3AQ99856 593 aa16.07■□□□□ 0.16
TRAPPC9-208ENST00000520857 AAMPQ13685 434 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms