RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 MED1Q15648 1581 aaPredicted RBP9.49□□□□□ -0.89
IGKV3D-25-201ENST00000519599 KIF1BO60333 1816 aa9.49□□□□□ -0.89
IGKV3D-25-201ENST00000519599 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
IGKV3D-25-201ENST00000519599 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
IGKV3D-25-201ENST00000519599 HSPA1LP34931 641 aa9.48□□□□□ -0.89
IGKV3D-25-201ENST00000519599 NUP155O75694 1391 aa9.48□□□□□ -0.89
IGKV3D-25-201ENST00000519599 PLEKHG1Q9ULL1 1385 aa9.48□□□□□ -0.89
IGKV3D-25-201ENST00000519599 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
IGKV3D-25-201ENST00000519599 TRPM2O94759 1503 aa9.47□□□□□ -0.89
IGKV3D-25-201ENST00000519599 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
IGKV3D-25-201ENST00000519599 ROBO1Q9Y6N7 1651 aa9.47□□□□□ -0.89
IGKV3D-25-201ENST00000519599 DIP2AQ14689 1571 aa9.46□□□□□ -0.89
IGKV3D-25-201ENST00000519599 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
IGKV3D-25-201ENST00000519599 ITGAEP38570 1179 aa9.46□□□□□ -0.9
IGKV3D-25-201ENST00000519599 HFM1A2PYH4 1435 aa9.46□□□□□ -0.9
IGKV3D-25-201ENST00000519599 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 IFT172Q9UG01 1749 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 PPLO60437 1756 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 DISP3Q9P2K9 1392 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 PTPRUQ92729 1446 aa9.45□□□□□ -0.9
IGKV3D-25-201ENST00000519599 TOM1O60784 492 aa9.44□□□□□ -0.9
IGKV3D-25-201ENST00000519599 KCNA6P17658 529 aa9.44□□□□□ -0.9
IGKV3D-25-201ENST00000519599 PIP4K2BP78356 416 aa9.44□□□□□ -0.9
IGKV3D-25-201ENST00000519599 EID1Q9Y6B2 187 aa9.44□□□□□ -0.9
IGKV3D-25-201ENST00000519599 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
IGKV3D-25-201ENST00000519599 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
IGKV3D-25-201ENST00000519599 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
IGKV3D-25-201ENST00000519599 FAM135BQ49AJ0 1406 aa9.41□□□□□ -0.9
IGKV3D-25-201ENST00000519599 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
IGKV3D-25-201ENST00000519599 COL16A1Q07092 1604 aaPredicted RBP9.41□□□□□ -0.9
IGKV3D-25-201ENST00000519599 PHLPP1O60346 1717 aa9.4□□□□□ -0.9
IGKV3D-25-201ENST00000519599 SENP3Q9H4L4 574 aaPredicted RBP9.4□□□□□ -0.9
IGKV3D-25-201ENST00000519599 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
IGKV3D-25-201ENST00000519599 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
IGKV3D-25-201ENST00000519599 SCAF1Q9H7N4 1312 aaKnown RBP9.38□□□□□ -0.91
IGKV3D-25-201ENST00000519599 NHSL1Q5SYE7 1610 aa9.38□□□□□ -0.91
IGKV3D-25-201ENST00000519599 METP08581 1390 aa9.37□□□□□ -0.91
IGKV3D-25-201ENST00000519599 AHDC1Q5TGY3 1603 aaPredicted RBP9.37□□□□□ -0.91
IGKV3D-25-201ENST00000519599 NCOA3Q9Y6Q9 1424 aa9.37□□□□□ -0.91
IGKV3D-25-201ENST00000519599 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
IGKV3D-25-201ENST00000519599 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
IGKV3D-25-201ENST00000519599 RGS17Q9UGC6 210 aaPredicted RBP9.35□□□□□ -0.91
IGKV3D-25-201ENST00000519599 LAMC1P11047 1609 aa9.34□□□□□ -0.91
IGKV3D-25-201ENST00000519599 KNDC1Q76NI1 1749 aa9.34□□□□□ -0.91
IGKV3D-25-201ENST00000519599 SOCS7O14512 581 aa9.34□□□□□ -0.91
IGKV3D-25-201ENST00000519599 MSH6P52701 1360 aa9.34□□□□□ -0.91
IGKV3D-25-201ENST00000519599 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
IGKV3D-25-201ENST00000519599 FOXD1Q16676 465 aa9.33□□□□□ -0.92
IGKV3D-25-201ENST00000519599 MST1RQ04912 1400 aa9.32□□□□□ -0.92
IGKV3D-25-201ENST00000519599 LRP6O75581 1613 aa9.32□□□□□ -0.92
IGKV3D-25-201ENST00000519599 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
IGKV3D-25-201ENST00000519599 AMOTL2Q9Y2J4 779 aa9.32□□□□□ -0.92
IGKV3D-25-201ENST00000519599 DCCP43146 1447 aa9.31□□□□□ -0.92
IGKV3D-25-201ENST00000519599 BCANQ96GW7 911 aa9.31□□□□□ -0.92
IGKV3D-25-201ENST00000519599 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
IGKV3D-25-201ENST00000519599 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
IGKV3D-25-201ENST00000519599 ADGRL3Q9HAR2 1447 aa9.31□□□□□ -0.92
IGKV3D-25-201ENST00000519599 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
IGKV3D-25-201ENST00000519599 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
IGKV3D-25-201ENST00000519599 SLC4A1APQ9BWU0 796 aaKnown RBP9.3□□□□□ -0.92
IGKV3D-25-201ENST00000519599 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
IGKV3D-25-201ENST00000519599 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
IGKV3D-25-201ENST00000519599 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
IGKV3D-25-201ENST00000519599 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
IGKV3D-25-201ENST00000519599 MPHOSPH9Q99550 1183 aa9.28□□□□□ -0.92
IGKV3D-25-201ENST00000519599 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
IGKV3D-25-201ENST00000519599 SETD5Q9C0A6 1442 aa9.28□□□□□ -0.92
IGKV3D-25-201ENST00000519599 ADGRF5Q8IZF2 1346 aa9.28□□□□□ -0.92
IGKV3D-25-201ENST00000519599 BRINP3Q76B58 766 aa9.27□□□□□ -0.93
IGKV3D-25-201ENST00000519599 TECPR2O15040 1411 aa9.27□□□□□ -0.93
IGKV3D-25-201ENST00000519599 CDC42BPGQ6DT37 1551 aa9.27□□□□□ -0.93
IGKV3D-25-201ENST00000519599 FMN2Q9NZ56 1722 aa9.27□□□□□ -0.93
IGKV3D-25-201ENST00000519599 RPGRIP1LQ68CZ1 1315 aa9.27□□□□□ -0.93
IGKV3D-25-201ENST00000519599 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
IGKV3D-25-201ENST00000519599 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
IGKV3D-25-201ENST00000519599 CADPS2Q86UW7 1296 aa9.26□□□□□ -0.93
IGKV3D-25-201ENST00000519599 JCADQ9P266 1359 aa9.25□□□□□ -0.93
IGKV3D-25-201ENST00000519599 POTEAQ6S8J7 498 aa9.25□□□□□ -0.93
IGKV3D-25-201ENST00000519599 MYOM2P54296 1465 aa9.25□□□□□ -0.93
IGKV3D-25-201ENST00000519599 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
IGKV3D-25-201ENST00000519599 MARF1Q9Y4F3 1742 aaKnown RBP9.25□□□□□ -0.93
IGKV3D-25-201ENST00000519599 COL22A1Q8NFW1 1626 aaPredicted RBP9.24□□□□□ -0.93
IGKV3D-25-201ENST00000519599 ADGRB1O14514 1584 aa9.24□□□□□ -0.93
IGKV3D-25-201ENST00000519599 USP32Q8NFA0 1604 aa9.23□□□□□ -0.93
IGKV3D-25-201ENST00000519599 VGFO15240 615 aaPredicted RBP9.23□□□□□ -0.93
IGKV3D-25-201ENST00000519599 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
IGKV3D-25-201ENST00000519599 ANKRD30BQ9BXX2 1392 aa9.23□□□□□ -0.93
IGKV3D-25-201ENST00000519599 PLEKHH1Q9ULM0 1364 aa9.23□□□□□ -0.93
IGKV3D-25-201ENST00000519599 ATF3P18847 181 aa9.22□□□□□ -0.93
IGKV3D-25-201ENST00000519599 LRPPRCP42704 1394 aaKnown RBP9.22□□□□□ -0.93
IGKV3D-25-201ENST00000519599 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
IGKV3D-25-201ENST00000519599 ARHGEF28Q8N1W1 1705 aaKnown RBP9.21□□□□□ -0.94
IGKV3D-25-201ENST00000519599 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms