RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 KCNA6P17658 529 aa18.96■□□□□ 0.63
TRAPPC9-206ENST00000519482 RRBP1Q9P2E9 1410 aaKnown RBP18.96■□□□□ 0.63
TRAPPC9-206ENST00000519482 NWD1Q149M9 1564 aa18.95■□□□□ 0.62
TRAPPC9-206ENST00000519482 ILDR2Q71H61 639 aa18.95■□□□□ 0.62
TRAPPC9-206ENST00000519482 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
TRAPPC9-206ENST00000519482 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
TRAPPC9-206ENST00000519482 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
TRAPPC9-206ENST00000519482 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-206ENST00000519482 NKTRP30414 1462 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-206ENST00000519482 BCANQ96GW7 911 aa18.92■□□□□ 0.62
TRAPPC9-206ENST00000519482 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
TRAPPC9-206ENST00000519482 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAPPC9-206ENST00000519482 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC9-206ENST00000519482 TMEM94Q12767 1356 aa18.9■□□□□ 0.62
TRAPPC9-206ENST00000519482 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.62
TRAPPC9-206ENST00000519482 CHGAP10645 457 aaKnown RBP18.89■□□□□ 0.61
TRAPPC9-206ENST00000519482 PROSER2Q86WR7 435 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC9-206ENST00000519482 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
TRAPPC9-206ENST00000519482 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
TRAPPC9-206ENST00000519482 SOCS7O14512 581 aa18.86■□□□□ 0.61
TRAPPC9-206ENST00000519482 NAIPQ13075 1403 aa18.85■□□□□ 0.61
TRAPPC9-206ENST00000519482 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
TRAPPC9-206ENST00000519482 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
TRAPPC9-206ENST00000519482 PIK3R4Q99570 1358 aa18.82■□□□□ 0.6
TRAPPC9-206ENST00000519482 ROBO1Q9Y6N7 1651 aa18.82■□□□□ 0.6
TRAPPC9-206ENST00000519482 MSH6P52701 1360 aa18.81■□□□□ 0.6
TRAPPC9-206ENST00000519482 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC9-206ENST00000519482 NCOA3Q9Y6Q9 1424 aa18.81■□□□□ 0.6
TRAPPC9-206ENST00000519482 TRPM2O94759 1503 aa18.8■□□□□ 0.6
TRAPPC9-206ENST00000519482 KIF1BO60333 1816 aa18.8■□□□□ 0.6
TRAPPC9-206ENST00000519482 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC9-206ENST00000519482 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
TRAPPC9-206ENST00000519482 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-206ENST00000519482 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
TRAPPC9-206ENST00000519482 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
TRAPPC9-206ENST00000519482 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
TRAPPC9-206ENST00000519482 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-206ENST00000519482 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-206ENST00000519482 SLAIN2Q9P270 581 aa18.74■□□□□ 0.59
TRAPPC9-206ENST00000519482 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-206ENST00000519482 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
TRAPPC9-206ENST00000519482 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
TRAPPC9-206ENST00000519482 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
TRAPPC9-206ENST00000519482 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-206ENST00000519482 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
TRAPPC9-206ENST00000519482 PTPRUQ92729 1446 aa18.71■□□□□ 0.59
TRAPPC9-206ENST00000519482 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
TRAPPC9-206ENST00000519482 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
TRAPPC9-206ENST00000519482 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
TRAPPC9-206ENST00000519482 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-206ENST00000519482 ATF3P18847 181 aa18.66■□□□□ 0.58
TRAPPC9-206ENST00000519482 DCCP43146 1447 aa18.65■□□□□ 0.58
TRAPPC9-206ENST00000519482 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC9-206ENST00000519482 PPLO60437 1756 aa18.64■□□□□ 0.57
TRAPPC9-206ENST00000519482 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
TRAPPC9-206ENST00000519482 METP08581 1390 aa18.64■□□□□ 0.57
TRAPPC9-206ENST00000519482 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
TRAPPC9-206ENST00000519482 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC9-206ENST00000519482 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-206ENST00000519482 JCADQ9P266 1359 aa18.61■□□□□ 0.57
TRAPPC9-206ENST00000519482 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
TRAPPC9-206ENST00000519482 RGS17Q9UGC6 210 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-206ENST00000519482 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
TRAPPC9-206ENST00000519482 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
TRAPPC9-206ENST00000519482 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
TRAPPC9-206ENST00000519482 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
TRAPPC9-206ENST00000519482 MST1RQ04912 1400 aa18.56■□□□□ 0.56
TRAPPC9-206ENST00000519482 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
TRAPPC9-206ENST00000519482 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
TRAPPC9-206ENST00000519482 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
TRAPPC9-206ENST00000519482 FOXD1Q16676 465 aa18.55■□□□□ 0.56
TRAPPC9-206ENST00000519482 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
TRAPPC9-206ENST00000519482 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
TRAPPC9-206ENST00000519482 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
TRAPPC9-206ENST00000519482 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
TRAPPC9-206ENST00000519482 SPATA31A6Q5VVP1 1343 aa18.53■□□□□ 0.56
TRAPPC9-206ENST00000519482 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
TRAPPC9-206ENST00000519482 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
TRAPPC9-206ENST00000519482 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
TRAPPC9-206ENST00000519482 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
TRAPPC9-206ENST00000519482 ROBO2Q9HCK4 1378 aa18.49■□□□□ 0.55
TRAPPC9-206ENST00000519482 LRP6O75581 1613 aa18.48■□□□□ 0.55
TRAPPC9-206ENST00000519482 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
TRAPPC9-206ENST00000519482 LAMC1P11047 1609 aa18.46■□□□□ 0.55
TRAPPC9-206ENST00000519482 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
TRAPPC9-206ENST00000519482 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.54
TRAPPC9-206ENST00000519482 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-206ENST00000519482 KNDC1Q76NI1 1749 aa18.44■□□□□ 0.54
TRAPPC9-206ENST00000519482 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-206ENST00000519482 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
TRAPPC9-206ENST00000519482 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
TRAPPC9-206ENST00000519482 TECPR2O15040 1411 aa18.42■□□□□ 0.54
TRAPPC9-206ENST00000519482 PIK3C2GO75747 1445 aa18.42■□□□□ 0.54
TRAPPC9-206ENST00000519482 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC9-206ENST00000519482 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
TRAPPC9-206ENST00000519482 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
TRAPPC9-206ENST00000519482 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
TRAPPC9-206ENST00000519482 MYOM2P54296 1465 aa18.38■□□□□ 0.53
TRAPPC9-206ENST00000519482 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
TRAPPC9-206ENST00000519482 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms