RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ROBO1Q9Y6N7 1651 aa29.54■■■□□ 2.32
CTNNA1-213ENST00000519113 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
CTNNA1-213ENST00000519113 SLAIN2Q9P270 581 aa29.53■■■□□ 2.32
CTNNA1-213ENST00000519113 NWD1Q149M9 1564 aa29.51■■■□□ 2.31
CTNNA1-213ENST00000519113 RPRD2Q5VT52 1461 aaKnown RBP29.49■■■□□ 2.31
CTNNA1-213ENST00000519113 ADGRL2O95490 1459 aa29.48■■■□□ 2.31
CTNNA1-213ENST00000519113 PPP1R15AO75807 674 aaPredicted RBP29.48■■■□□ 2.31
CTNNA1-213ENST00000519113 PLEKHG1Q9ULL1 1385 aa29.48■■■□□ 2.31
CTNNA1-213ENST00000519113 JCADQ9P266 1359 aa29.45■■■□□ 2.31
CTNNA1-213ENST00000519113 ZFYVE9O95405 1425 aa29.45■■■□□ 2.3
CTNNA1-213ENST00000519113 ANKRD50Q9ULJ7 1429 aa29.45■■■□□ 2.3
CTNNA1-213ENST00000519113 FAM50AQ14320 339 aaKnown RBP29.43■■■□□ 2.3
CTNNA1-213ENST00000519113 RIMS2Q9UQ26 1411 aa29.43■■■□□ 2.3
CTNNA1-213ENST00000519113 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
CTNNA1-213ENST00000519113 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.41■■■□□ 2.3
CTNNA1-213ENST00000519113 NCOA3Q9Y6Q9 1424 aa29.4■■■□□ 2.3
CTNNA1-213ENST00000519113 C14orf37Q86TY3 774 aa29.37■■■□□ 2.29
CTNNA1-213ENST00000519113 PHLPP1O60346 1717 aa29.37■■■□□ 2.29
CTNNA1-213ENST00000519113 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
CTNNA1-213ENST00000519113 CHD2O14647 1828 aaKnown RBP29.34■■■□□ 2.29
CTNNA1-213ENST00000519113 CADPS2Q86UW7 1296 aa29.33■■■□□ 2.29
CTNNA1-213ENST00000519113 TMEM131LA2VDJ0 1609 aa29.33■■■□□ 2.29
CTNNA1-213ENST00000519113 SPATA31A6Q5VVP1 1343 aa29.31■■■□□ 2.28
CTNNA1-213ENST00000519113 C19orf44Q9H6X5 657 aa29.31■■■□□ 2.28
CTNNA1-213ENST00000519113 ATF3P18847 181 aa29.3■■■□□ 2.28
CTNNA1-213ENST00000519113 PIK3R4Q99570 1358 aa29.29■■■□□ 2.28
CTNNA1-213ENST00000519113 GCC2Q8IWJ2 1684 aa29.29■■■□□ 2.28
CTNNA1-213ENST00000519113 MEX3CQ5U5Q3 659 aaKnown RBP29.28■■■□□ 2.28
CTNNA1-213ENST00000519113 MYO5BQ9ULV0 1848 aa29.27■■■□□ 2.28
CTNNA1-213ENST00000519113 NUTM2DQ5VT03 806 aaPredicted RBP29.27■■■□□ 2.28
CTNNA1-213ENST00000519113 ADAMTS13Q76LX8 1427 aa29.27■■■□□ 2.28
CTNNA1-213ENST00000519113 COL16A1Q07092 1604 aaPredicted RBP29.27■■■□□ 2.28
CTNNA1-213ENST00000519113 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
CTNNA1-213ENST00000519113 DIP2AQ14689 1571 aa29.24■■■□□ 2.27
CTNNA1-213ENST00000519113 UNC13BO14795 1591 aa29.22■■■□□ 2.27
CTNNA1-213ENST00000519113 AMOTL2Q9Y2J4 779 aa29.2■■■□□ 2.26
CTNNA1-213ENST00000519113 LRP6O75581 1613 aa29.2■■■□□ 2.26
CTNNA1-213ENST00000519113 AHDC1Q5TGY3 1603 aaPredicted RBP29.19■■■□□ 2.26
CTNNA1-213ENST00000519113 ROCK1Q13464 1354 aa29.18■■■□□ 2.26
CTNNA1-213ENST00000519113 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
CTNNA1-213ENST00000519113 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.17■■■□□ 2.26
CTNNA1-213ENST00000519113 E9PCH4 1651 aa29.16■■■□□ 2.26
CTNNA1-213ENST00000519113 TRPM2O94759 1503 aa29.15■■■□□ 2.26
CTNNA1-213ENST00000519113 BRINP3Q76B58 766 aa29.15■■■□□ 2.26
CTNNA1-213ENST00000519113 TRIM52Q96A61 297 aa29.14■■■□□ 2.26
CTNNA1-213ENST00000519113 NUP155O75694 1391 aa29.13■■■□□ 2.25
CTNNA1-213ENST00000519113 UPF1Q92900 1129 aaKnown RBP eCLIP29.12■■■□□ 2.25
CTNNA1-213ENST00000519113 PTPRUQ92729 1446 aa29.11■■■□□ 2.25
CTNNA1-213ENST00000519113 RXRBP28702 533 aa29.11■■■□□ 2.25
CTNNA1-213ENST00000519113 IQGAP3Q86VI3 1631 aa29.11■■■□□ 2.25
CTNNA1-213ENST00000519113 SHPRHQ149N8 1683 aa29.11■■■□□ 2.25
CTNNA1-213ENST00000519113 DCCP43146 1447 aa29.11■■■□□ 2.25
CTNNA1-213ENST00000519113 NUTM2BA6NNL0 878 aaPredicted RBP29.09■■■□□ 2.25
CTNNA1-213ENST00000519113 NUTM2EB1AL46 878 aaPredicted RBP29.09■■■□□ 2.25
CTNNA1-213ENST00000519113 NUTM2AQ8IVF1 878 aaPredicted RBP29.09■■■□□ 2.25
CTNNA1-213ENST00000519113 ZNF326Q5BKZ1 582 aaKnown RBP29.03■■■□□ 2.24
CTNNA1-213ENST00000519113 LRRC59Q96AG4 307 aaKnown RBP29.03■■■□□ 2.24
CTNNA1-213ENST00000519113 SETD5Q9C0A6 1442 aa29.03■■■□□ 2.24
CTNNA1-213ENST00000519113 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
CTNNA1-213ENST00000519113 ITGAEP38570 1179 aa29.01■■■□□ 2.23
CTNNA1-213ENST00000519113 AFF2P51816 1311 aa29■■■□□ 2.23
CTNNA1-213ENST00000519113 CDK12Q9NYV4 1490 aaPredicted RBP29■■■□□ 2.23
CTNNA1-213ENST00000519113 MST1RQ04912 1400 aa29■■■□□ 2.23
CTNNA1-213ENST00000519113 SETBP1Q9Y6X0 1596 aa29■■■□□ 2.23
CTNNA1-213ENST00000519113 METP08581 1390 aa28.98■■■□□ 2.23
CTNNA1-213ENST00000519113 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
CTNNA1-213ENST00000519113 NRXN3Q9Y4C0 1643 aa28.95■■■□□ 2.23
CTNNA1-213ENST00000519113 ADGRL3Q9HAR2 1447 aa28.93■■■□□ 2.22
CTNNA1-213ENST00000519113 C8orf37Q96NL8 207 aa28.92■■■□□ 2.22
CTNNA1-213ENST00000519113 QTRT2Q9H974 415 aaKnown RBP28.91■■■□□ 2.22
CTNNA1-213ENST00000519113 NHSL1Q5SYE7 1610 aa28.91■■■□□ 2.22
CTNNA1-213ENST00000519113 RBM6P78332 1123 aaKnown RBP28.9■■■□□ 2.22
CTNNA1-213ENST00000519113 PNPLA6Q8IY17 1366 aa28.88■■■□□ 2.21
CTNNA1-213ENST00000519113 DDX17Q92841 729 aaKnown RBP28.88■■■□□ 2.21
CTNNA1-213ENST00000519113 SPHKAPQ2M3C7 1700 aa28.88■■■□□ 2.21
CTNNA1-213ENST00000519113 NGLY1Q96IV0 654 aa28.83■■■□□ 2.21
CTNNA1-213ENST00000519113 C1orf167Q5SNV9 1468 aa28.82■■■□□ 2.2
CTNNA1-213ENST00000519113 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
CTNNA1-213ENST00000519113 RGS12O14924 1447 aa28.81■■■□□ 2.2
CTNNA1-213ENST00000519113 VGFO15240 615 aaPredicted RBP28.8■■■□□ 2.2
CTNNA1-213ENST00000519113 ADAMTS2O95450 1211 aa28.8■■■□□ 2.2
CTNNA1-213ENST00000519113 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
CTNNA1-213ENST00000519113 CLTCL1P53675 1640 aa28.77■■■□□ 2.2
CTNNA1-213ENST00000519113 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
CTNNA1-213ENST00000519113 SOS2Q07890 1332 aaPredicted RBP28.76■■■□□ 2.19
CTNNA1-213ENST00000519113 PPARGC1BQ86YN6 1023 aaKnown RBP28.75■■■□□ 2.19
CTNNA1-213ENST00000519113 ORAI2Q96SN7 254 aa28.74■■■□□ 2.19
CTNNA1-213ENST00000519113 SRCAPQ6ZRS2 3230 aa28.73■■■□□ 2.19
CTNNA1-213ENST00000519113 USP21Q9UK80 565 aa28.73■■■□□ 2.19
CTNNA1-213ENST00000519113 ROBO2Q9HCK4 1378 aa28.73■■■□□ 2.19
CTNNA1-213ENST00000519113 RPGRIP1LQ68CZ1 1315 aa28.71■■■□□ 2.19
CTNNA1-213ENST00000519113 TRPC5Q9UL62 973 aaPredicted RBP28.71■■■□□ 2.19
CTNNA1-213ENST00000519113 LAMC1P11047 1609 aa28.7■■■□□ 2.19
CTNNA1-213ENST00000519113 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
CTNNA1-213ENST00000519113 KIF1BO60333 1816 aa28.69■■■□□ 2.18
CTNNA1-213ENST00000519113 FNBP4Q8N3X1 1017 aaPredicted RBP28.68■■■□□ 2.18
CTNNA1-213ENST00000519113 PRAG1Q86YV5 1406 aa28.68■■■□□ 2.18
CTNNA1-213ENST00000519113 HFM1A2PYH4 1435 aa28.67■■■□□ 2.18
CTNNA1-213ENST00000519113 NAIPQ13075 1403 aa28.66■■■□□ 2.18
CTNNA1-213ENST00000519113 FOXD1Q16676 465 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms