RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
MCM4-202ENST00000517709 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
MCM4-202ENST00000517709 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
MCM4-202ENST00000517709 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
MCM4-202ENST00000517709 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
MCM4-202ENST00000517709 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
MCM4-202ENST00000517709 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
MCM4-202ENST00000517709 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
MCM4-202ENST00000517709 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
MCM4-202ENST00000517709 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
MCM4-202ENST00000517709 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
MCM4-202ENST00000517709 PPLO60437 1756 aa17.96■□□□□ 0.47
MCM4-202ENST00000517709 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
MCM4-202ENST00000517709 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
MCM4-202ENST00000517709 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
MCM4-202ENST00000517709 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
MCM4-202ENST00000517709 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
MCM4-202ENST00000517709 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
MCM4-202ENST00000517709 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
MCM4-202ENST00000517709 TRIM52Q96A61 297 aa17.89■□□□□ 0.45
MCM4-202ENST00000517709 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
MCM4-202ENST00000517709 TMEM94Q12767 1356 aa17.89■□□□□ 0.45
MCM4-202ENST00000517709 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
MCM4-202ENST00000517709 ROBO1Q9Y6N7 1651 aa17.88■□□□□ 0.45
MCM4-202ENST00000517709 FOXD1Q16676 465 aa17.88■□□□□ 0.45
MCM4-202ENST00000517709 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
MCM4-202ENST00000517709 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
MCM4-202ENST00000517709 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
MCM4-202ENST00000517709 KCNA6P17658 529 aa17.85■□□□□ 0.45
MCM4-202ENST00000517709 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
MCM4-202ENST00000517709 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
MCM4-202ENST00000517709 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
MCM4-202ENST00000517709 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
MCM4-202ENST00000517709 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
MCM4-202ENST00000517709 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.45
MCM4-202ENST00000517709 HSPA1LP34931 641 aa17.83■□□□□ 0.44
MCM4-202ENST00000517709 BCANQ96GW7 911 aa17.83■□□□□ 0.44
MCM4-202ENST00000517709 TOM1O60784 492 aa17.81■□□□□ 0.44
MCM4-202ENST00000517709 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
MCM4-202ENST00000517709 SPATA31E1Q6ZUB1 1445 aa17.8■□□□□ 0.44
MCM4-202ENST00000517709 METP08581 1390 aa17.79■□□□□ 0.44
MCM4-202ENST00000517709 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
MCM4-202ENST00000517709 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
MCM4-202ENST00000517709 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
MCM4-202ENST00000517709 PROSER2Q86WR7 435 aaPredicted RBP17.77■□□□□ 0.44
MCM4-202ENST00000517709 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
MCM4-202ENST00000517709 PIK3R4Q99570 1358 aa17.77■□□□□ 0.43
MCM4-202ENST00000517709 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
MCM4-202ENST00000517709 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
MCM4-202ENST00000517709 HDGFP51858 240 aaKnown RBP17.74■□□□□ 0.43
MCM4-202ENST00000517709 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
MCM4-202ENST00000517709 KNDC1Q76NI1 1749 aa17.73■□□□□ 0.43
MCM4-202ENST00000517709 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
MCM4-202ENST00000517709 MSH6P52701 1360 aa17.72■□□□□ 0.43
MCM4-202ENST00000517709 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
MCM4-202ENST00000517709 AMOTL2Q9Y2J4 779 aa17.7■□□□□ 0.42
MCM4-202ENST00000517709 NHSL1Q5SYE7 1610 aa17.69■□□□□ 0.42
MCM4-202ENST00000517709 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
MCM4-202ENST00000517709 PTCH1Q13635 1447 aa17.68■□□□□ 0.42
MCM4-202ENST00000517709 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
MCM4-202ENST00000517709 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
MCM4-202ENST00000517709 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
MCM4-202ENST00000517709 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
MCM4-202ENST00000517709 AHDC1Q5TGY3 1603 aaPredicted RBP17.67■□□□□ 0.42
MCM4-202ENST00000517709 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
MCM4-202ENST00000517709 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
MCM4-202ENST00000517709 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
MCM4-202ENST00000517709 LAMC1P11047 1609 aa17.65■□□□□ 0.42
MCM4-202ENST00000517709 MYOM2P54296 1465 aa17.65■□□□□ 0.42
MCM4-202ENST00000517709 DCCP43146 1447 aa17.64■□□□□ 0.42
MCM4-202ENST00000517709 MST1RQ04912 1400 aa17.64■□□□□ 0.42
MCM4-202ENST00000517709 RPGRIP1LQ68CZ1 1315 aa17.64■□□□□ 0.41
MCM4-202ENST00000517709 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
MCM4-202ENST00000517709 SHPRHQ149N8 1683 aa17.63■□□□□ 0.41
MCM4-202ENST00000517709 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
MCM4-202ENST00000517709 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
MCM4-202ENST00000517709 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
MCM4-202ENST00000517709 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
MCM4-202ENST00000517709 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
MCM4-202ENST00000517709 TECPR2O15040 1411 aa17.59■□□□□ 0.41
MCM4-202ENST00000517709 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
MCM4-202ENST00000517709 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
MCM4-202ENST00000517709 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
MCM4-202ENST00000517709 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
MCM4-202ENST00000517709 LRP6O75581 1613 aa17.57■□□□□ 0.4
MCM4-202ENST00000517709 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
MCM4-202ENST00000517709 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
MCM4-202ENST00000517709 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
MCM4-202ENST00000517709 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
MCM4-202ENST00000517709 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
MCM4-202ENST00000517709 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
MCM4-202ENST00000517709 ATF3P18847 181 aa17.53■□□□□ 0.4
MCM4-202ENST00000517709 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
MCM4-202ENST00000517709 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.4
MCM4-202ENST00000517709 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
MCM4-202ENST00000517709 DHX57Q6P158 1386 aaKnown RBP17.52■□□□□ 0.39
MCM4-202ENST00000517709 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
MCM4-202ENST00000517709 HRCP23327 699 aa17.5■□□□□ 0.39
MCM4-202ENST00000517709 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
MCM4-202ENST00000517709 STK26Q9P289 416 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms