RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 RIMS2Q9UQ26 1411 aa23.04■■□□□ 1.28
C8orf88-201ENST00000517562 ANKRD30BQ9BXX2 1392 aa23.03■■□□□ 1.28
C8orf88-201ENST00000517562 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
C8orf88-201ENST00000517562 NPHP4O75161 1426 aaPredicted RBP23.02■■□□□ 1.28
C8orf88-201ENST00000517562 SCAF11Q99590 1463 aaKnown RBP23.02■■□□□ 1.28
C8orf88-201ENST00000517562 PPP1R15AO75807 674 aaPredicted RBP23.01■■□□□ 1.27
C8orf88-201ENST00000517562 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
C8orf88-201ENST00000517562 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
C8orf88-201ENST00000517562 IQGAP1P46940 1657 aa22.98■■□□□ 1.27
C8orf88-201ENST00000517562 ZNF335Q9H4Z2 1342 aaPredicted RBP22.97■■□□□ 1.27
C8orf88-201ENST00000517562 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
C8orf88-201ENST00000517562 DHX57Q6P158 1386 aaKnown RBP22.96■■□□□ 1.27
C8orf88-201ENST00000517562 MED14O60244 1454 aa22.96■■□□□ 1.27
C8orf88-201ENST00000517562 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
C8orf88-201ENST00000517562 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
C8orf88-201ENST00000517562 NEXMIFQ5QGS0 1516 aa22.92■■□□□ 1.26
C8orf88-201ENST00000517562 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
C8orf88-201ENST00000517562 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
C8orf88-201ENST00000517562 PPLO60437 1756 aa22.89■■□□□ 1.26
C8orf88-201ENST00000517562 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
C8orf88-201ENST00000517562 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
C8orf88-201ENST00000517562 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
C8orf88-201ENST00000517562 STRCP1A6NGW2 1772 aa22.87■■□□□ 1.25
C8orf88-201ENST00000517562 RPGRIP1LQ68CZ1 1315 aa22.86■■□□□ 1.25
C8orf88-201ENST00000517562 VGFO15240 615 aaPredicted RBP22.85■■□□□ 1.25
C8orf88-201ENST00000517562 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.25
C8orf88-201ENST00000517562 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
C8orf88-201ENST00000517562 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
C8orf88-201ENST00000517562 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
C8orf88-201ENST00000517562 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
C8orf88-201ENST00000517562 CERKQ8TCT0 537 aa22.81■■□□□ 1.24
C8orf88-201ENST00000517562 TBX22Q9Y458 520 aa22.81■■□□□ 1.24
C8orf88-201ENST00000517562 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
C8orf88-201ENST00000517562 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
C8orf88-201ENST00000517562 KCNA6P17658 529 aa22.76■■□□□ 1.23
C8orf88-201ENST00000517562 METP08581 1390 aa22.76■■□□□ 1.23
C8orf88-201ENST00000517562 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
C8orf88-201ENST00000517562 PTPRUQ92729 1446 aa22.74■■□□□ 1.23
C8orf88-201ENST00000517562 ALKQ9UM73 1620 aa22.73■■□□□ 1.23
C8orf88-201ENST00000517562 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
C8orf88-201ENST00000517562 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
C8orf88-201ENST00000517562 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
C8orf88-201ENST00000517562 L3MBTL2Q969R5 705 aa22.73■■□□□ 1.23
C8orf88-201ENST00000517562 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
C8orf88-201ENST00000517562 STK26Q9P289 416 aa22.7■■□□□ 1.22
C8orf88-201ENST00000517562 SETD1AO15047 1707 aaKnown RBP22.7■■□□□ 1.22
C8orf88-201ENST00000517562 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
C8orf88-201ENST00000517562 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
C8orf88-201ENST00000517562 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
C8orf88-201ENST00000517562 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
C8orf88-201ENST00000517562 CPS1P31327 1500 aa22.67■■□□□ 1.22
C8orf88-201ENST00000517562 C14orf93Q9H972 538 aaKnown RBP22.66■■□□□ 1.22
C8orf88-201ENST00000517562 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
C8orf88-201ENST00000517562 MYOM2P54296 1465 aa22.65■■□□□ 1.22
C8orf88-201ENST00000517562 NRXN1Q9ULB1 1477 aa22.64■■□□□ 1.21
C8orf88-201ENST00000517562 TMEM94Q12767 1356 aa22.63■■□□□ 1.21
C8orf88-201ENST00000517562 PIK3R4Q99570 1358 aa22.63■■□□□ 1.21
C8orf88-201ENST00000517562 NWD1Q149M9 1564 aa22.62■■□□□ 1.21
C8orf88-201ENST00000517562 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
C8orf88-201ENST00000517562 ASXL1Q8IXJ9 1541 aa22.6■■□□□ 1.21
C8orf88-201ENST00000517562 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
C8orf88-201ENST00000517562 C14orf37Q86TY3 774 aa22.59■■□□□ 1.21
C8orf88-201ENST00000517562 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
C8orf88-201ENST00000517562 WAPLQ7Z5K2 1190 aa22.58■■□□□ 1.21
C8orf88-201ENST00000517562 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
C8orf88-201ENST00000517562 NBPF8Q3BBV2 869 aa22.57■■□□□ 1.2
C8orf88-201ENST00000517562 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
C8orf88-201ENST00000517562 STAC3Q96MF2 364 aa22.56■■□□□ 1.2
C8orf88-201ENST00000517562 NKTRP30414 1462 aaKnown RBP22.55■■□□□ 1.2
C8orf88-201ENST00000517562 ILDR1Q86SU0 546 aaPredicted RBP22.55■■□□□ 1.2
C8orf88-201ENST00000517562 PRAG1Q86YV5 1406 aa22.55■■□□□ 1.2
C8orf88-201ENST00000517562 PIP4K2BP78356 416 aa22.54■■□□□ 1.2
C8orf88-201ENST00000517562 TRAK1Q9UPV9 953 aa22.54■■□□□ 1.2
C8orf88-201ENST00000517562 YTHDC2Q9H6S0 1430 aaKnown RBP22.54■■□□□ 1.2
C8orf88-201ENST00000517562 LRPPRCP42704 1394 aaKnown RBP22.53■■□□□ 1.2
C8orf88-201ENST00000517562 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
C8orf88-201ENST00000517562 FBXO41Q8TF61 875 aa22.53■■□□□ 1.2
C8orf88-201ENST00000517562 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
C8orf88-201ENST00000517562 PLEKHH1Q9ULM0 1364 aa22.51■■□□□ 1.19
C8orf88-201ENST00000517562 LAMC1P11047 1609 aa22.51■■□□□ 1.19
C8orf88-201ENST00000517562 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
C8orf88-201ENST00000517562 TOM1O60784 492 aa22.49■■□□□ 1.19
C8orf88-201ENST00000517562 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
C8orf88-201ENST00000517562 ABCC11Q96J66 1382 aa22.49■■□□□ 1.19
C8orf88-201ENST00000517562 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.48■■□□□ 1.19
C8orf88-201ENST00000517562 PRAM1Q96QH2 718 aa22.47■■□□□ 1.19
C8orf88-201ENST00000517562 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
C8orf88-201ENST00000517562 MSH6P52701 1360 aa22.47■■□□□ 1.19
C8orf88-201ENST00000517562 C19orf44Q9H6X5 657 aa22.46■■□□□ 1.19
C8orf88-201ENST00000517562 POGKQ9P215 609 aa22.45■■□□□ 1.18
C8orf88-201ENST00000517562 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.18
C8orf88-201ENST00000517562 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.18
C8orf88-201ENST00000517562 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
C8orf88-201ENST00000517562 TRPM1Q7Z4N2 1603 aa22.44■■□□□ 1.18
C8orf88-201ENST00000517562 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
C8orf88-201ENST00000517562 ATF3P18847 181 aa22.43■■□□□ 1.18
C8orf88-201ENST00000517562 NUTM2FA1L443 756 aa22.42■■□□□ 1.18
C8orf88-201ENST00000517562 TECPR2O15040 1411 aa22.41■■□□□ 1.18
C8orf88-201ENST00000517562 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
C8orf88-201ENST00000517562 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms