RNA–Protein interactions for RNA: ENST00000517421.1

DCTN4-204, Transcript of dynactin subunit 4, humanhuman

TSL 5

Gene DCTN4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN4-204ENST00000517421 HSPA1LP34931 641 aa23.73■■□□□ 1.39
DCTN4-204ENST00000517421 SLC26A8Q96RN1 970 aa23.72■■□□□ 1.39
DCTN4-204ENST00000517421 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
DCTN4-204ENST00000517421 RIMS2Q9UQ26 1411 aa23.72■■□□□ 1.39
DCTN4-204ENST00000517421 NAIPQ13075 1403 aa23.71■■□□□ 1.39
DCTN4-204ENST00000517421 ILDR2Q71H61 639 aa23.7■■□□□ 1.38
DCTN4-204ENST00000517421 CHD2O14647 1828 aaKnown RBP23.69■■□□□ 1.38
DCTN4-204ENST00000517421 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
DCTN4-204ENST00000517421 PLEKHG1Q9ULL1 1385 aa23.67■■□□□ 1.38
DCTN4-204ENST00000517421 NKTRP30414 1462 aaKnown RBP23.65■■□□□ 1.38
DCTN4-204ENST00000517421 MED1Q15648 1581 aaPredicted RBP23.65■■□□□ 1.38
DCTN4-204ENST00000517421 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
DCTN4-204ENST00000517421 CLTCL1P53675 1640 aa23.64■■□□□ 1.38
DCTN4-204ENST00000517421 KCNA6P17658 529 aa23.63■■□□□ 1.37
DCTN4-204ENST00000517421 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
DCTN4-204ENST00000517421 NRXN3Q9Y4C0 1643 aa23.62■■□□□ 1.37
DCTN4-204ENST00000517421 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
DCTN4-204ENST00000517421 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
DCTN4-204ENST00000517421 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
DCTN4-204ENST00000517421 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
DCTN4-204ENST00000517421 TRPM2O94759 1503 aa23.59■■□□□ 1.37
DCTN4-204ENST00000517421 DIP2AQ14689 1571 aa23.59■■□□□ 1.37
DCTN4-204ENST00000517421 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
DCTN4-204ENST00000517421 ROBO1Q9Y6N7 1651 aa23.55■■□□□ 1.36
DCTN4-204ENST00000517421 BCANQ96GW7 911 aa23.55■■□□□ 1.36
DCTN4-204ENST00000517421 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
DCTN4-204ENST00000517421 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
DCTN4-204ENST00000517421 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
DCTN4-204ENST00000517421 KIF1BO60333 1816 aa23.52■■□□□ 1.36
DCTN4-204ENST00000517421 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.36
DCTN4-204ENST00000517421 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
DCTN4-204ENST00000517421 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
DCTN4-204ENST00000517421 XRN1Q8IZH2 1706 aaKnown RBP23.51■■□□□ 1.35
DCTN4-204ENST00000517421 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
DCTN4-204ENST00000517421 HDGFP51858 240 aaKnown RBP23.49■■□□□ 1.35
DCTN4-204ENST00000517421 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
DCTN4-204ENST00000517421 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
DCTN4-204ENST00000517421 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
DCTN4-204ENST00000517421 MSH6P52701 1360 aa23.44■■□□□ 1.34
DCTN4-204ENST00000517421 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
DCTN4-204ENST00000517421 PPLO60437 1756 aa23.41■■□□□ 1.34
DCTN4-204ENST00000517421 METP08581 1390 aa23.4■■□□□ 1.34
DCTN4-204ENST00000517421 NCOA3Q9Y6Q9 1424 aa23.4■■□□□ 1.34
DCTN4-204ENST00000517421 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
DCTN4-204ENST00000517421 SOCS7O14512 581 aa23.39■■□□□ 1.33
DCTN4-204ENST00000517421 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
DCTN4-204ENST00000517421 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
DCTN4-204ENST00000517421 FOXD1Q16676 465 aa23.37■■□□□ 1.33
DCTN4-204ENST00000517421 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
DCTN4-204ENST00000517421 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
DCTN4-204ENST00000517421 SLAIN2Q9P270 581 aa23.36■■□□□ 1.33
DCTN4-204ENST00000517421 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
DCTN4-204ENST00000517421 IFT172Q9UG01 1749 aa23.33■■□□□ 1.33
DCTN4-204ENST00000517421 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
DCTN4-204ENST00000517421 DCCP43146 1447 aa23.28■■□□□ 1.32
DCTN4-204ENST00000517421 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
DCTN4-204ENST00000517421 C19orf44Q9H6X5 657 aa23.28■■□□□ 1.32
DCTN4-204ENST00000517421 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
DCTN4-204ENST00000517421 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
DCTN4-204ENST00000517421 MST1RQ04912 1400 aa23.25■■□□□ 1.31
DCTN4-204ENST00000517421 ADGRL3Q9HAR2 1447 aa23.25■■□□□ 1.31
DCTN4-204ENST00000517421 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
DCTN4-204ENST00000517421 MPHOSPH9Q99550 1183 aa23.25■■□□□ 1.31
DCTN4-204ENST00000517421 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
DCTN4-204ENST00000517421 PRAG1Q86YV5 1406 aa23.24■■□□□ 1.31
DCTN4-204ENST00000517421 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
DCTN4-204ENST00000517421 NHSL1Q5SYE7 1610 aa23.23■■□□□ 1.31
DCTN4-204ENST00000517421 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
DCTN4-204ENST00000517421 PTCH1Q13635 1447 aa23.23■■□□□ 1.31
DCTN4-204ENST00000517421 ATF3P18847 181 aa23.22■■□□□ 1.31
DCTN4-204ENST00000517421 RPGRIP1LQ68CZ1 1315 aa23.22■■□□□ 1.31
DCTN4-204ENST00000517421 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
DCTN4-204ENST00000517421 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
DCTN4-204ENST00000517421 ROBO2Q9HCK4 1378 aa23.21■■□□□ 1.31
DCTN4-204ENST00000517421 LRP6O75581 1613 aa23.2■■□□□ 1.3
DCTN4-204ENST00000517421 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
DCTN4-204ENST00000517421 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
DCTN4-204ENST00000517421 JCADQ9P266 1359 aa23.19■■□□□ 1.3
DCTN4-204ENST00000517421 ADGRF5Q8IZF2 1346 aa23.18■■□□□ 1.3
DCTN4-204ENST00000517421 RAB3GAP2Q9H2M9 1393 aa23.17■■□□□ 1.3
DCTN4-204ENST00000517421 KNDC1Q76NI1 1749 aa23.13■■□□□ 1.29
DCTN4-204ENST00000517421 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
DCTN4-204ENST00000517421 PIK3C2GO75747 1445 aa23.13■■□□□ 1.29
DCTN4-204ENST00000517421 LAMC1P11047 1609 aa23.12■■□□□ 1.29
DCTN4-204ENST00000517421 POTEAQ6S8J7 498 aa23.12■■□□□ 1.29
DCTN4-204ENST00000517421 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
DCTN4-204ENST00000517421 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
DCTN4-204ENST00000517421 TECPR2O15040 1411 aa23.09■■□□□ 1.29
DCTN4-204ENST00000517421 DDX17Q92841 729 aaKnown RBP23.09■■□□□ 1.29
DCTN4-204ENST00000517421 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
DCTN4-204ENST00000517421 CDC42BPGQ6DT37 1551 aa23.08■■□□□ 1.29
DCTN4-204ENST00000517421 SPATA31A6Q5VVP1 1343 aa23.06■■□□□ 1.28
DCTN4-204ENST00000517421 MYOM2P54296 1465 aa23.05■■□□□ 1.28
DCTN4-204ENST00000517421 LRPPRCP42704 1394 aaKnown RBP23.03■■□□□ 1.28
DCTN4-204ENST00000517421 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
DCTN4-204ENST00000517421 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
DCTN4-204ENST00000517421 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
DCTN4-204ENST00000517421 ORAI2Q96SN7 254 aa23■■□□□ 1.27
DCTN4-204ENST00000517421 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
DCTN4-204ENST00000517421 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms