RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
PABPC1-202ENST00000517403 APLP2Q06481 763 aa13.51□□□□□ -0.25
PABPC1-202ENST00000517403 HSPA1LP34931 641 aa13.5□□□□□ -0.25
PABPC1-202ENST00000517403 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
PABPC1-202ENST00000517403 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
PABPC1-202ENST00000517403 KANK1Q14678 1352 aa13.47□□□□□ -0.25
PABPC1-202ENST00000517403 NRXN3Q9Y4C0 1643 aa13.47□□□□□ -0.25
PABPC1-202ENST00000517403 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
PABPC1-202ENST00000517403 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
PABPC1-202ENST00000517403 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
PABPC1-202ENST00000517403 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
PABPC1-202ENST00000517403 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
PABPC1-202ENST00000517403 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
PABPC1-202ENST00000517403 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
PABPC1-202ENST00000517403 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
PABPC1-202ENST00000517403 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
PABPC1-202ENST00000517403 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
PABPC1-202ENST00000517403 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
PABPC1-202ENST00000517403 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
PABPC1-202ENST00000517403 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
PABPC1-202ENST00000517403 ITGAEP38570 1179 aa13.41□□□□□ -0.26
PABPC1-202ENST00000517403 TMEM94Q12767 1356 aa13.41□□□□□ -0.26
PABPC1-202ENST00000517403 NKTRP30414 1462 aaKnown RBP13.4□□□□□ -0.26
PABPC1-202ENST00000517403 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
PABPC1-202ENST00000517403 NAIPQ13075 1403 aa13.39□□□□□ -0.27
PABPC1-202ENST00000517403 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
PABPC1-202ENST00000517403 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-202ENST00000517403 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
PABPC1-202ENST00000517403 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
PABPC1-202ENST00000517403 TOM1O60784 492 aa13.37□□□□□ -0.27
PABPC1-202ENST00000517403 NUP155O75694 1391 aa13.36□□□□□ -0.27
PABPC1-202ENST00000517403 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
PABPC1-202ENST00000517403 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
PABPC1-202ENST00000517403 TRPM2O94759 1503 aa13.34□□□□□ -0.27
PABPC1-202ENST00000517403 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-202ENST00000517403 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
PABPC1-202ENST00000517403 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
PABPC1-202ENST00000517403 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
PABPC1-202ENST00000517403 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
PABPC1-202ENST00000517403 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-202ENST00000517403 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
PABPC1-202ENST00000517403 SOCS7O14512 581 aa13.33□□□□□ -0.28
PABPC1-202ENST00000517403 KCNA6P17658 529 aa13.33□□□□□ -0.28
PABPC1-202ENST00000517403 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
PABPC1-202ENST00000517403 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-202ENST00000517403 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
PABPC1-202ENST00000517403 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
PABPC1-202ENST00000517403 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
PABPC1-202ENST00000517403 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
PABPC1-202ENST00000517403 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
PABPC1-202ENST00000517403 LRP6O75581 1613 aa13.28□□□□□ -0.28
PABPC1-202ENST00000517403 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
PABPC1-202ENST00000517403 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-202ENST00000517403 METP08581 1390 aa13.28□□□□□ -0.28
PABPC1-202ENST00000517403 PPLO60437 1756 aa13.27□□□□□ -0.29
PABPC1-202ENST00000517403 KIF1BO60333 1816 aa13.26□□□□□ -0.29
PABPC1-202ENST00000517403 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
PABPC1-202ENST00000517403 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
PABPC1-202ENST00000517403 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
PABPC1-202ENST00000517403 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
PABPC1-202ENST00000517403 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
PABPC1-202ENST00000517403 MSH6P52701 1360 aa13.22□□□□□ -0.29
PABPC1-202ENST00000517403 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
PABPC1-202ENST00000517403 BCANQ96GW7 911 aa13.21□□□□□ -0.29
PABPC1-202ENST00000517403 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
PABPC1-202ENST00000517403 MST1RQ04912 1400 aa13.21□□□□□ -0.3
PABPC1-202ENST00000517403 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
PABPC1-202ENST00000517403 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
PABPC1-202ENST00000517403 SLAIN2Q9P270 581 aa13.19□□□□□ -0.3
PABPC1-202ENST00000517403 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
PABPC1-202ENST00000517403 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
PABPC1-202ENST00000517403 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
PABPC1-202ENST00000517403 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPC1-202ENST00000517403 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
PABPC1-202ENST00000517403 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
PABPC1-202ENST00000517403 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
PABPC1-202ENST00000517403 DCCP43146 1447 aa13.15□□□□□ -0.3
PABPC1-202ENST00000517403 LAMC1P11047 1609 aa13.15□□□□□ -0.3
PABPC1-202ENST00000517403 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-202ENST00000517403 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
PABPC1-202ENST00000517403 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
PABPC1-202ENST00000517403 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
PABPC1-202ENST00000517403 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
PABPC1-202ENST00000517403 JCADQ9P266 1359 aa13.12□□□□□ -0.31
PABPC1-202ENST00000517403 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-202ENST00000517403 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
PABPC1-202ENST00000517403 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
PABPC1-202ENST00000517403 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
PABPC1-202ENST00000517403 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
PABPC1-202ENST00000517403 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
PABPC1-202ENST00000517403 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
PABPC1-202ENST00000517403 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
PABPC1-202ENST00000517403 PIK3C2GO75747 1445 aa13.08□□□□□ -0.32
PABPC1-202ENST00000517403 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
PABPC1-202ENST00000517403 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
PABPC1-202ENST00000517403 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
PABPC1-202ENST00000517403 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
PABPC1-202ENST00000517403 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
PABPC1-202ENST00000517403 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
PABPC1-202ENST00000517403 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms