RNA–Protein interactions for RNA: ENST00000515768.5

CSNK1A1-207, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CSNK1A1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-207ENST00000515768 AMHR2Q16671 573 aa13.84□□□□□ -0.19
CSNK1A1-207ENST00000515768 LRCH3Q96II8 777 aa13.83□□□□□ -0.2
CSNK1A1-207ENST00000515768 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
CSNK1A1-207ENST00000515768 BCAMP50895 628 aa13.82□□□□□ -0.2
CSNK1A1-207ENST00000515768 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
CSNK1A1-207ENST00000515768 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-207ENST00000515768 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-207ENST00000515768 PDE4DQ08499 809 aa13.81□□□□□ -0.2
CSNK1A1-207ENST00000515768 RNF166Q96A37 237 aaPredicted RBP13.81□□□□□ -0.2
CSNK1A1-207ENST00000515768 THSD4Q6ZMP0 1018 aa13.8□□□□□ -0.2
CSNK1A1-207ENST00000515768 REPIN1Q9BWE0 567 aaKnown RBP13.8□□□□□ -0.2
CSNK1A1-207ENST00000515768 TMUB1Q9BVT8 246 aa13.79□□□□□ -0.2
CSNK1A1-207ENST00000515768 CLCN1P35523 988 aa13.78□□□□□ -0.2
CSNK1A1-207ENST00000515768 TTLL12Q14166 644 aaPredicted RBP13.78□□□□□ -0.2
CSNK1A1-207ENST00000515768 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
CSNK1A1-207ENST00000515768 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
CSNK1A1-207ENST00000515768 RNF40O75150 1001 aa13.76□□□□□ -0.21
CSNK1A1-207ENST00000515768 SLF2Q8IX21 1173 aa13.76□□□□□ -0.21
CSNK1A1-207ENST00000515768 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
CSNK1A1-207ENST00000515768 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
CSNK1A1-207ENST00000515768 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
CSNK1A1-207ENST00000515768 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
CSNK1A1-207ENST00000515768 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
CSNK1A1-207ENST00000515768 ABCC9O60706 1549 aa13.73□□□□□ -0.21
CSNK1A1-207ENST00000515768 SLC10A3P09131 477 aa13.72□□□□□ -0.21
CSNK1A1-207ENST00000515768 PTPN5P54829 565 aa13.72□□□□□ -0.21
CSNK1A1-207ENST00000515768 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
CSNK1A1-207ENST00000515768 PPP4CP60510 307 aa13.71□□□□□ -0.21
CSNK1A1-207ENST00000515768 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
CSNK1A1-207ENST00000515768 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
CSNK1A1-207ENST00000515768 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
CSNK1A1-207ENST00000515768 SSTR3P32745 418 aaPredicted RBP13.68□□□□□ -0.22
CSNK1A1-207ENST00000515768 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
CSNK1A1-207ENST00000515768 CD46P15529 392 aa13.66□□□□□ -0.22
CSNK1A1-207ENST00000515768 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
CSNK1A1-207ENST00000515768 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
CSNK1A1-207ENST00000515768 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
CSNK1A1-207ENST00000515768 MS4A1P11836 297 aa13.65□□□□□ -0.22
CSNK1A1-207ENST00000515768 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
CSNK1A1-207ENST00000515768 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
CSNK1A1-207ENST00000515768 KDM4CQ9H3R0 1056 aa13.65□□□□□ -0.22
CSNK1A1-207ENST00000515768 CFHP08603 1231 aa13.63□□□□□ -0.23
CSNK1A1-207ENST00000515768 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
CSNK1A1-207ENST00000515768 APLP1P51693 650 aa13.61□□□□□ -0.23
CSNK1A1-207ENST00000515768 GCGRP47871 477 aa13.6□□□□□ -0.23
CSNK1A1-207ENST00000515768 NYAP1Q6ZVC0 841 aa13.59□□□□□ -0.23
CSNK1A1-207ENST00000515768 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
CSNK1A1-207ENST00000515768 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
CSNK1A1-207ENST00000515768 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
CSNK1A1-207ENST00000515768 PRR14Q9BWN1 585 aa13.56□□□□□ -0.24
CSNK1A1-207ENST00000515768 FAM117AQ9C073 453 aa13.55□□□□□ -0.24
CSNK1A1-207ENST00000515768 KDM4AO75164 1064 aa13.53□□□□□ -0.24
CSNK1A1-207ENST00000515768 FUT2Q10981 343 aa13.53□□□□□ -0.24
CSNK1A1-207ENST00000515768 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
CSNK1A1-207ENST00000515768 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
CSNK1A1-207ENST00000515768 PCDHB3Q9Y5E6 796 aa13.5□□□□□ -0.25
CSNK1A1-207ENST00000515768 DDRGK1Q96HY6 314 aa13.49□□□□□ -0.25
CSNK1A1-207ENST00000515768 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
CSNK1A1-207ENST00000515768 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
CSNK1A1-207ENST00000515768 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
CSNK1A1-207ENST00000515768 USP46P62068 366 aa13.47□□□□□ -0.25
CSNK1A1-207ENST00000515768 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
CSNK1A1-207ENST00000515768 COPS2P61201 443 aa13.46□□□□□ -0.25
CSNK1A1-207ENST00000515768 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.25
CSNK1A1-207ENST00000515768 IL27Q8NEV9 243 aa13.46□□□□□ -0.25
CSNK1A1-207ENST00000515768 MTRQ99707 1265 aa13.46□□□□□ -0.25
CSNK1A1-207ENST00000515768 HOXA2O43364 376 aa13.45□□□□□ -0.26
CSNK1A1-207ENST00000515768 TJAP1Q5JTD0 557 aa13.45□□□□□ -0.26
CSNK1A1-207ENST00000515768 MORN1Q5T089 497 aa13.45□□□□□ -0.26
CSNK1A1-207ENST00000515768 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
CSNK1A1-207ENST00000515768 HLA-CQ95604 372 aa13.44□□□□□ -0.26
CSNK1A1-207ENST00000515768 DIXDC1Q155Q3 683 aa13.43□□□□□ -0.26
CSNK1A1-207ENST00000515768 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
CSNK1A1-207ENST00000515768 NDUFV2P19404 249 aa13.41□□□□□ -0.26
CSNK1A1-207ENST00000515768 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
CSNK1A1-207ENST00000515768 GUCA2AQ02747 115 aa13.4□□□□□ -0.26
CSNK1A1-207ENST00000515768 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
CSNK1A1-207ENST00000515768 SCUBE3Q8IX30 993 aa13.4□□□□□ -0.26
CSNK1A1-207ENST00000515768 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
CSNK1A1-207ENST00000515768 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
CSNK1A1-207ENST00000515768 NR1I2O75469 434 aa13.39□□□□□ -0.27
CSNK1A1-207ENST00000515768 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
CSNK1A1-207ENST00000515768 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
CSNK1A1-207ENST00000515768 ZPR1O75312 459 aa13.37□□□□□ -0.27
CSNK1A1-207ENST00000515768 FDX1P10109 184 aa13.36□□□□□ -0.27
CSNK1A1-207ENST00000515768 KCNC4Q03721 635 aa13.36□□□□□ -0.27
CSNK1A1-207ENST00000515768 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
CSNK1A1-207ENST00000515768 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
CSNK1A1-207ENST00000515768 SPTLC1O15269 473 aa13.35□□□□□ -0.27
CSNK1A1-207ENST00000515768 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
CSNK1A1-207ENST00000515768 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
CSNK1A1-207ENST00000515768 PCDHGC3Q9UN70 934 aa13.35□□□□□ -0.27
CSNK1A1-207ENST00000515768 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
CSNK1A1-207ENST00000515768 GJA5P36382 358 aa13.33□□□□□ -0.28
CSNK1A1-207ENST00000515768 SKIV2LQ15477 1246 aaKnown RBP13.33□□□□□ -0.28
CSNK1A1-207ENST00000515768 TLL1O43897 1013 aa13.32□□□□□ -0.28
CSNK1A1-207ENST00000515768 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
CSNK1A1-207ENST00000515768 THAP11Q96EK4 314 aa13.32□□□□□ -0.28
CSNK1A1-207ENST00000515768 PLA2G2EQ9NZK7 142 aa13.32□□□□□ -0.28
CSNK1A1-207ENST00000515768 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms