RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 FAM135BQ49AJ0 1406 aa28.5■■■□□ 2.15
SPOP-220ENST00000515508 SLC26A8Q96RN1 970 aa28.49■■■□□ 2.15
SPOP-220ENST00000515508 SENP3Q9H4L4 574 aaPredicted RBP28.49■■■□□ 2.15
SPOP-220ENST00000515508 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
SPOP-220ENST00000515508 E9PCH4 1651 aa28.47■■■□□ 2.15
SPOP-220ENST00000515508 ROCK1Q13464 1354 aa28.46■■■□□ 2.15
SPOP-220ENST00000515508 IQGAP3Q86VI3 1631 aa28.46■■■□□ 2.15
SPOP-220ENST00000515508 ROBO1Q9Y6N7 1651 aa28.45■■■□□ 2.15
SPOP-220ENST00000515508 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
SPOP-220ENST00000515508 CHD2O14647 1828 aaKnown RBP28.44■■■□□ 2.14
SPOP-220ENST00000515508 RIMS2Q9UQ26 1411 aa28.43■■■□□ 2.14
SPOP-220ENST00000515508 PROSER2Q86WR7 435 aaPredicted RBP28.41■■■□□ 2.14
SPOP-220ENST00000515508 RBM33Q96EV2 1170 aaKnown RBP28.36■■■□□ 2.13
SPOP-220ENST00000515508 BCANQ96GW7 911 aa28.35■■■□□ 2.13
SPOP-220ENST00000515508 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
SPOP-220ENST00000515508 MSH6P52701 1360 aa28.35■■■□□ 2.13
SPOP-220ENST00000515508 HDGFP51858 240 aaKnown RBP28.34■■■□□ 2.13
SPOP-220ENST00000515508 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
SPOP-220ENST00000515508 ADAMTS13Q76LX8 1427 aa28.31■■■□□ 2.12
SPOP-220ENST00000515508 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.3■■■□□ 2.12
SPOP-220ENST00000515508 RGS17Q9UGC6 210 aaPredicted RBP28.3■■■□□ 2.12
SPOP-220ENST00000515508 TBX22Q9Y458 520 aa28.29■■■□□ 2.12
SPOP-220ENST00000515508 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
SPOP-220ENST00000515508 PHLPP1O60346 1717 aa28.27■■■□□ 2.12
SPOP-220ENST00000515508 NUP155O75694 1391 aa28.26■■■□□ 2.12
SPOP-220ENST00000515508 PIK3R4Q99570 1358 aa28.25■■■□□ 2.11
SPOP-220ENST00000515508 CHGAP10645 457 aaKnown RBP28.25■■■□□ 2.11
SPOP-220ENST00000515508 SPHKAPQ2M3C7 1700 aa28.24■■■□□ 2.11
SPOP-220ENST00000515508 SLAIN2Q9P270 581 aa28.24■■■□□ 2.11
SPOP-220ENST00000515508 TRPM2O94759 1503 aa28.23■■■□□ 2.11
SPOP-220ENST00000515508 COL16A1Q07092 1604 aaPredicted RBP28.21■■■□□ 2.11
SPOP-220ENST00000515508 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
SPOP-220ENST00000515508 NUTM2DQ5VT03 806 aaPredicted RBP28.19■■■□□ 2.1
SPOP-220ENST00000515508 NRXN3Q9Y4C0 1643 aa28.18■■■□□ 2.1
SPOP-220ENST00000515508 ITGAEP38570 1179 aa28.17■■■□□ 2.1
SPOP-220ENST00000515508 SETBP1Q9Y6X0 1596 aa28.16■■■□□ 2.1
SPOP-220ENST00000515508 JCADQ9P266 1359 aa28.16■■■□□ 2.1
SPOP-220ENST00000515508 XRN1Q8IZH2 1706 aaKnown RBP28.15■■■□□ 2.1
SPOP-220ENST00000515508 AHDC1Q5TGY3 1603 aaPredicted RBP28.14■■■□□ 2.1
SPOP-220ENST00000515508 PTPRUQ92729 1446 aa28.14■■■□□ 2.1
SPOP-220ENST00000515508 POTEAQ6S8J7 498 aa28.11■■■□□ 2.09
SPOP-220ENST00000515508 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
SPOP-220ENST00000515508 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
SPOP-220ENST00000515508 CADPS2Q86UW7 1296 aa28.1■■■□□ 2.09
SPOP-220ENST00000515508 DCCP43146 1447 aa28.09■■■□□ 2.09
SPOP-220ENST00000515508 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
SPOP-220ENST00000515508 CLTCL1P53675 1640 aa28.08■■■□□ 2.09
SPOP-220ENST00000515508 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
SPOP-220ENST00000515508 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
SPOP-220ENST00000515508 SHPRHQ149N8 1683 aa28.07■■■□□ 2.08
SPOP-220ENST00000515508 ATF3P18847 181 aa28.05■■■□□ 2.08
SPOP-220ENST00000515508 NEXMIFQ5QGS0 1516 aa28.05■■■□□ 2.08
SPOP-220ENST00000515508 LRP6O75581 1613 aa28.04■■■□□ 2.08
SPOP-220ENST00000515508 NAIPQ13075 1403 aa28.02■■■□□ 2.08
SPOP-220ENST00000515508 SPATA31A6Q5VVP1 1343 aa28.02■■■□□ 2.08
SPOP-220ENST00000515508 KIF1BO60333 1816 aa28.02■■■□□ 2.08
SPOP-220ENST00000515508 METP08581 1390 aa27.99■■■□□ 2.07
SPOP-220ENST00000515508 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
SPOP-220ENST00000515508 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
SPOP-220ENST00000515508 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
SPOP-220ENST00000515508 NHSL1Q5SYE7 1610 aa27.98■■■□□ 2.07
SPOP-220ENST00000515508 BRINP3Q76B58 766 aa27.97■■■□□ 2.07
SPOP-220ENST00000515508 MST1RQ04912 1400 aa27.96■■■□□ 2.07
SPOP-220ENST00000515508 NALCNQ8IZF0 1738 aa27.95■■■□□ 2.07
SPOP-220ENST00000515508 ADGRL3Q9HAR2 1447 aa27.94■■■□□ 2.06
SPOP-220ENST00000515508 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
SPOP-220ENST00000515508 SETD5Q9C0A6 1442 aa27.9■■■□□ 2.06
SPOP-220ENST00000515508 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
SPOP-220ENST00000515508 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
SPOP-220ENST00000515508 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
SPOP-220ENST00000515508 ZNF772Q68DY9 489 aaPredicted RBP27.85■■■□□ 2.05
SPOP-220ENST00000515508 PPLO60437 1756 aa27.83■■■□□ 2.05
SPOP-220ENST00000515508 LAMC1P11047 1609 aa27.82■■■□□ 2.04
SPOP-220ENST00000515508 VGFO15240 615 aaPredicted RBP27.8■■■□□ 2.04
SPOP-220ENST00000515508 C1orf167Q5SNV9 1468 aa27.77■■■□□ 2.04
SPOP-220ENST00000515508 ROBO2Q9HCK4 1378 aa27.77■■■□□ 2.04
SPOP-220ENST00000515508 RPGRIP1LQ68CZ1 1315 aa27.77■■■□□ 2.04
SPOP-220ENST00000515508 TRIM52Q96A61 297 aa27.77■■■□□ 2.04
SPOP-220ENST00000515508 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
SPOP-220ENST00000515508 SLC4A1APQ9BWU0 796 aaKnown RBP27.76■■■□□ 2.03
SPOP-220ENST00000515508 PNPLA6Q8IY17 1366 aa27.75■■■□□ 2.03
SPOP-220ENST00000515508 CDK12Q9NYV4 1490 aaPredicted RBP27.75■■■□□ 2.03
SPOP-220ENST00000515508 NUTM2BA6NNL0 878 aaPredicted RBP27.74■■■□□ 2.03
SPOP-220ENST00000515508 NUTM2EB1AL46 878 aaPredicted RBP27.74■■■□□ 2.03
SPOP-220ENST00000515508 NUTM2AQ8IVF1 878 aaPredicted RBP27.74■■■□□ 2.03
SPOP-220ENST00000515508 DDX17Q92841 729 aaKnown RBP27.71■■■□□ 2.03
SPOP-220ENST00000515508 AFF2P51816 1311 aa27.7■■■□□ 2.03
SPOP-220ENST00000515508 IFT172Q9UG01 1749 aa27.68■■■□□ 2.02
SPOP-220ENST00000515508 RXRBP28702 533 aa27.68■■■□□ 2.02
SPOP-220ENST00000515508 CDC42BPGQ6DT37 1551 aa27.68■■■□□ 2.02
SPOP-220ENST00000515508 SOS2Q07890 1332 aaPredicted RBP27.65■■■□□ 2.02
SPOP-220ENST00000515508 UPF1Q92900 1129 aaKnown RBP eCLIP27.64■■■□□ 2.02
SPOP-220ENST00000515508 CCDC144AA2RUR9 1427 aa27.64■■■□□ 2.02
SPOP-220ENST00000515508 SPATA31E1Q6ZUB1 1445 aa27.63■■■□□ 2.01
SPOP-220ENST00000515508 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
SPOP-220ENST00000515508 ORAI2Q96SN7 254 aa27.62■■■□□ 2.01
SPOP-220ENST00000515508 FOXD1Q16676 465 aa27.61■■■□□ 2.01
SPOP-220ENST00000515508 C8orf37Q96NL8 207 aa27.61■■■□□ 2.01
SPOP-220ENST00000515508 KNDC1Q76NI1 1749 aa27.61■■■□□ 2.01
SPOP-220ENST00000515508 TECPR2O15040 1411 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms